RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 A8MWP6 167 aa15.09■□□□□ 0.01
PDLIM2-207ENST00000409417 IFNA10P01566 189 aa15.09■□□□□ 0.01
PDLIM2-207ENST00000409417 UNQ9165/PRO28630Q6UXU0 137 aa15.09■□□□□ 0.01
PDLIM2-207ENST00000409417 ZNF256Q9Y2P7 627 aaPredicted RBP15.09■□□□□ 0.01
PDLIM2-207ENST00000409417 C2orf70A6NJV1 201 aa15.08■□□□□ 0.01
PDLIM2-207ENST00000409417 GNG7O60262 68 aa15.08■□□□□ 0.01
PDLIM2-207ENST00000409417 RPS10-NUDT3A0A1W2PQS6 291 aa15.08■□□□□ 0
PDLIM2-207ENST00000409417 WI2-2373I1.2A0A1W2PRP0 233 aa15.08■□□□□ 0
PDLIM2-207ENST00000409417 NDUFA4O00483 81 aa15.08■□□□□ 0
PDLIM2-207ENST00000409417 SYNGR2O43760 224 aa15.08■□□□□ 0
PDLIM2-207ENST00000409417 IL5P05113 134 aa15.08■□□□□ 0
PDLIM2-207ENST00000409417 ID3Q02535 119 aa15.08■□□□□ 0
PDLIM2-207ENST00000409417 ADAMTSL5Q6ZMM2 481 aa15.08■□□□□ 0
PDLIM2-207ENST00000409417 TMEM190Q8WZ59 177 aa15.08■□□□□ 0
PDLIM2-207ENST00000409417 CIB3Q96Q77 187 aaPredicted RBP15.08■□□□□ 0
PDLIM2-207ENST00000409417 MAGT1Q9H0U3 335 aa15.08■□□□□ 0
PDLIM2-207ENST00000409417 PALMDQ9NP74 551 aa15.08■□□□□ 0
PDLIM2-207ENST00000409417 TMEM213A2RRL7 107 aa15.07■□□□□ 0
PDLIM2-207ENST00000409417 K7EIL1 84 aa15.07■□□□□ 0
PDLIM2-207ENST00000409417 LY86O95711 162 aa15.07■□□□□ 0
PDLIM2-207ENST00000409417 FOLR2P14207 255 aa15.07■□□□□ 0
PDLIM2-207ENST00000409417 ELLP55199 621 aaPredicted RBP15.07■□□□□ 0
PDLIM2-207ENST00000409417 RELQ04864 619 aaPredicted RBP15.07■□□□□ 0
PDLIM2-207ENST00000409417 MLANAQ16655 118 aa15.07■□□□□ 0
PDLIM2-207ENST00000409417 IAH1Q2TAA2 248 aaPredicted RBP15.07■□□□□ 0
PDLIM2-207ENST00000409417 HAPLN4Q86UW8 402 aa15.07■□□□□ 0
PDLIM2-207ENST00000409417 C12orf45Q8N5I9 185 aaPredicted RBP15.07■□□□□ 0
PDLIM2-207ENST00000409417 OR4D5Q8NGN0 318 aa15.07■□□□□ 0
PDLIM2-207ENST00000409417 OR4X1Q8NH49 305 aa15.07■□□□□ 0
PDLIM2-207ENST00000409417 UFC1Q9Y3C8 167 aa15.07■□□□□ 0
PDLIM2-207ENST00000409417 IAPPP10997 89 aa15.06■□□□□ 0
PDLIM2-207ENST00000409417 SLC25A4P12235 298 aa15.06■□□□□ 0
PDLIM2-207ENST00000409417 SPNP16150 400 aa15.06■□□□□ 0
PDLIM2-207ENST00000409417 CBLN1P23435 193 aa15.06■□□□□ 0
PDLIM2-207ENST00000409417 TM4SF20Q53R12 229 aa15.06■□□□□ 0
PDLIM2-207ENST00000409417 ETFRF1Q6IPR1 90 aa15.06■□□□□ 0
PDLIM2-207ENST00000409417 UXS1Q8NBZ7 420 aa15.06■□□□□ 0
PDLIM2-207ENST00000409417 MRAPQ8TCY5 172 aa15.06■□□□□ 0
PDLIM2-207ENST00000409417 OR10C1Q96KK4 312 aa15.06■□□□□ 0
PDLIM2-207ENST00000409417 MRPL36Q9P0J6 103 aaKnown RBP15.06■□□□□ 0
PDLIM2-207ENST00000409417 CLN5O75503 358 aa15.05■□□□□ -0
PDLIM2-207ENST00000409417 TMEM50AO95807 157 aa15.05■□□□□ -0
PDLIM2-207ENST00000409417 IFNA4P05014 189 aa15.05■□□□□ -0
PDLIM2-207ENST00000409417 NKX2-1P43699 371 aaPredicted RBP15.05■□□□□ -0
PDLIM2-207ENST00000409417 PRSS54Q6PEW0 395 aa15.05■□□□□ -0
PDLIM2-207ENST00000409417 MARC2Q969Z3 335 aa15.05■□□□□ -0
PDLIM2-207ENST00000409417 PRR25Q96S07 402 aa15.05■□□□□ -0
PDLIM2-207ENST00000409417 DAZ1Q9NQZ3 744 aaKnown RBP15.05■□□□□ -0
PDLIM2-207ENST00000409417 PRKDCP78527 4128 aaKnown RBP15.05■□□□□ -0
PDLIM2-207ENST00000409417 INMT-MINDY4F8WBC2 141 aa15.04■□□□□ -0
PDLIM2-207ENST00000409417 RPP30P78346 268 aaKnown RBP15.04■□□□□ -0
PDLIM2-207ENST00000409417 TMEM116Q8NCL8 245 aa15.04■□□□□ -0
PDLIM2-207ENST00000409417 ZNF414Q96IQ9 312 aa15.04■□□□□ -0
PDLIM2-207ENST00000409417 MARVELD1Q9BSK0 173 aa15.04■□□□□ -0
PDLIM2-207ENST00000409417 GPN1Q9HCN4 374 aaPredicted RBP15.04■□□□□ -0
PDLIM2-207ENST00000409417 TECRQ9NZ01 308 aaKnown RBP15.04■□□□□ -0
PDLIM2-207ENST00000409417 C15orf62A8K5M9 175 aa15.03■□□□□ -0
PDLIM2-207ENST00000409417 WRBO00258 174 aa15.03■□□□□ -0
PDLIM2-207ENST00000409417 C8orf88P0DMB2 117 aa15.03■□□□□ -0
PDLIM2-207ENST00000409417 EDN2P20800 178 aa15.03■□□□□ -0
PDLIM2-207ENST00000409417 POLR2GP62487 172 aaKnown RBP eCLIP15.03■□□□□ -0
PDLIM2-207ENST00000409417 DEFB114Q30KQ6 69 aa15.03■□□□□ -0
PDLIM2-207ENST00000409417 ZBTB8BQ8NAP8 495 aaPredicted RBP15.03■□□□□ -0
PDLIM2-207ENST00000409417 OR2K2Q8NGT1 345 aa15.03■□□□□ -0
PDLIM2-207ENST00000409417 DYNLRB2Q8TF09 96 aa15.03■□□□□ -0
PDLIM2-207ENST00000409417 CACNG8Q8WXS5 425 aa15.03■□□□□ -0
PDLIM2-207ENST00000409417 C20orf24Q9BUV8 137 aa15.03■□□□□ -0
PDLIM2-207ENST00000409417 GSKIPQ9P0R6 139 aa15.03■□□□□ -0
PDLIM2-207ENST00000409417 TGP01266 2768 aa15.02■□□□□ -0
PDLIM2-207ENST00000409417 K7EMT4 169 aa15.02■□□□□ -0
PDLIM2-207ENST00000409417 PRAF2O60831 178 aa15.02■□□□□ -0
PDLIM2-207ENST00000409417 SCGB2A1O75556 95 aa15.02■□□□□ -0
PDLIM2-207ENST00000409417 YIF1AO95070 293 aa15.02■□□□□ -0
PDLIM2-207ENST00000409417 GP9P14770 177 aa15.02■□□□□ -0
PDLIM2-207ENST00000409417 RAB11AP62491 216 aa15.02■□□□□ -0
PDLIM2-207ENST00000409417 CD69Q07108 199 aa15.02■□□□□ -0
PDLIM2-207ENST00000409417 CD300EQ496F6 205 aaPredicted RBP15.02■□□□□ -0
PDLIM2-207ENST00000409417 LCN12Q6JVE5 192 aa15.02■□□□□ -0
PDLIM2-207ENST00000409417 MRPL27Q9P0M9 148 aaKnown RBP15.02■□□□□ -0
PDLIM2-207ENST00000409417 TRAV30A0A087WSZ9 112 aa15.01□□□□□ -0.01
PDLIM2-207ENST00000409417 SNRPGP15A8MWD9 76 aa15.01□□□□□ -0.01
PDLIM2-207ENST00000409417 FAM25EA8MYX2 175 aa15.01□□□□□ -0.01
PDLIM2-207ENST00000409417 CCSO14618 274 aa15.01□□□□□ -0.01
PDLIM2-207ENST00000409417 GPX4P36969 197 aaPredicted RBP15.01□□□□□ -0.01
PDLIM2-207ENST00000409417 RND2P52198 227 aa15.01□□□□□ -0.01
PDLIM2-207ENST00000409417 SLC16A13Q7RTY0 426 aa15.01□□□□□ -0.01
PDLIM2-207ENST00000409417 IGHV3OR16-8A0A075B7F1 116 aa15.01□□□□□ -0.01
PDLIM2-207ENST00000409417 IGKV1-17P01599 117 aa15.01□□□□□ -0.01
PDLIM2-207ENST00000409417 DCTN2Q13561 401 aaKnown RBP15.01□□□□□ -0.01
PDLIM2-207ENST00000409417 ZNF600Q6ZNG1 722 aa15.01□□□□□ -0.01
PDLIM2-207ENST00000409417 MLXQ9UH92 298 aa15.01□□□□□ -0.01
PDLIM2-207ENST00000409417 PAIP2BQ9ULR5 123 aaKnown RBP15.01□□□□□ -0.01
PDLIM2-207ENST00000409417 C5orf51A6NDU8 294 aa15□□□□□ -0.01
PDLIM2-207ENST00000409417 SSSCA1O60232 199 aa15□□□□□ -0.01
PDLIM2-207ENST00000409417 IGLC1P0CG04 106 aa15□□□□□ -0.01
PDLIM2-207ENST00000409417 DEFB121Q5J5C9 76 aa15□□□□□ -0.01
PDLIM2-207ENST00000409417 SPANXN5Q5MJ07 72 aa15□□□□□ -0.01
PDLIM2-207ENST00000409417 TOMM20LQ6UXN7 152 aa15□□□□□ -0.01
PDLIM2-207ENST00000409417 NPIPB3Q92617 1050 aa15□□□□□ -0.01
PDLIM2-207ENST00000409417 SMIM8Q96KF7 97 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms