RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 IGKV1D-37A0A075B6S9 117 aa13.55□□□□□ -0.24
NUP50-203ENST00000407019 LYNX1G3V0Z9 82 aa13.55□□□□□ -0.24
NUP50-203ENST00000407019 REG1AP05451 166 aa13.55□□□□□ -0.24
NUP50-203ENST00000407019 LYNX1P0DP58 116 aa13.55□□□□□ -0.24
NUP50-203ENST00000407019 TIGITQ495A1 244 aa13.55□□□□□ -0.24
NUP50-203ENST00000407019 C10orf113Q5VZT2 155 aa13.55□□□□□ -0.24
NUP50-203ENST00000407019 MMD2Q8IY49 270 aa13.55□□□□□ -0.24
NUP50-203ENST00000407019 MUC15Q8N387 334 aa13.55□□□□□ -0.24
NUP50-203ENST00000407019 ZNF355PQ9NSJ1 428 aa13.55□□□□□ -0.24
NUP50-203ENST00000407019 IGLV1-47P01700 117 aa13.54□□□□□ -0.24
NUP50-203ENST00000407019 IGHV3-48P01763 117 aa13.54□□□□□ -0.24
NUP50-203ENST00000407019 ADMP35318 185 aa13.54□□□□□ -0.24
NUP50-203ENST00000407019 LGALS4P56470 323 aa13.54□□□□□ -0.24
NUP50-203ENST00000407019 SELENOTP62341 195 aa13.54□□□□□ -0.24
NUP50-203ENST00000407019 FAM209BQ5JX69 171 aa13.54□□□□□ -0.24
NUP50-203ENST00000407019 GBGT1Q8N5D6 347 aa13.54□□□□□ -0.24
NUP50-203ENST00000407019 MRPL36Q9P0J6 103 aaKnown RBP13.54□□□□□ -0.24
NUP50-203ENST00000407019 IGLC7A0M8Q6 106 aa13.54□□□□□ -0.24
NUP50-203ENST00000407019 GZMBP10144 247 aa13.54□□□□□ -0.24
NUP50-203ENST00000407019 SSX2Q16385 188 aa13.54□□□□□ -0.24
NUP50-203ENST00000407019 FBXL19-AS1Q494R0 122 aa13.54□□□□□ -0.24
NUP50-203ENST00000407019 ETFRF1Q6IPR1 90 aa13.54□□□□□ -0.24
NUP50-203ENST00000407019 CA7P43166 264 aa13.53□□□□□ -0.24
NUP50-203ENST00000407019 RPL27AP46776 148 aaKnown RBP13.53□□□□□ -0.24
NUP50-203ENST00000407019 DLX1P56177 255 aa13.53□□□□□ -0.24
NUP50-203ENST00000407019 PKIAP61925 76 aa13.53□□□□□ -0.24
NUP50-203ENST00000407019 TNXAQ16473 311 aa13.53□□□□□ -0.24
NUP50-203ENST00000407019 PATE2Q6UY27 113 aa13.53□□□□□ -0.24
NUP50-203ENST00000407019 ZNF841Q6ZN19 808 aa13.53□□□□□ -0.24
NUP50-203ENST00000407019 IGF2BP2-AS1Q96M15 143 aa13.53□□□□□ -0.24
NUP50-203ENST00000407019 PAXXQ9BUH6 204 aa13.53□□□□□ -0.24
NUP50-203ENST00000407019 CLEC7AQ9BXN2 247 aa13.53□□□□□ -0.24
NUP50-203ENST00000407019 OSTCQ9NRP0 149 aa13.53□□□□□ -0.24
NUP50-203ENST00000407019 ROS1P08922 2347 aa13.53□□□□□ -0.24
NUP50-203ENST00000407019 FSTL3O95633 263 aa13.52□□□□□ -0.24
NUP50-203ENST00000407019 GCGP01275 180 aa13.52□□□□□ -0.24
NUP50-203ENST00000407019 CRYGBP07316 175 aa13.52□□□□□ -0.24
NUP50-203ENST00000407019 CBLN1P23435 193 aa13.52□□□□□ -0.24
NUP50-203ENST00000407019 PVRIGQ6DKI7 326 aa13.52□□□□□ -0.24
NUP50-203ENST00000407019 OR1L6Q8NGR2 347 aa13.52□□□□□ -0.24
NUP50-203ENST00000407019 MISP3Q96FF7 219 aa13.52□□□□□ -0.24
NUP50-203ENST00000407019 INSIG2Q9Y5U4 225 aa13.52□□□□□ -0.24
NUP50-203ENST00000407019 ARFGEF3Q5TH69 2177 aa13.52□□□□□ -0.25
NUP50-203ENST00000407019 IGHV1-3A0A0C4DH29 117 aa13.52□□□□□ -0.25
NUP50-203ENST00000407019 BUB1B-PAK6H3BSN5 160 aa13.52□□□□□ -0.25
NUP50-203ENST00000407019 PYYP10082 97 aa13.52□□□□□ -0.25
NUP50-203ENST00000407019 HCP5Q6MZN7 132 aa13.52□□□□□ -0.25
NUP50-203ENST00000407019 BEND2Q8NDZ0 799 aa13.52□□□□□ -0.25
NUP50-203ENST00000407019 MAP1BP46821 2468 aaKnown RBP13.52□□□□□ -0.25
NUP50-203ENST00000407019 PCNX1Q96RV3 2341 aa13.52□□□□□ -0.25
NUP50-203ENST00000407019 TSTD3H0UI37 97 aa13.51□□□□□ -0.25
NUP50-203ENST00000407019 SIAH2O43255 324 aa13.51□□□□□ -0.25
NUP50-203ENST00000407019 RBP4P02753 201 aa13.51□□□□□ -0.25
NUP50-203ENST00000407019 CRYGCP07315 174 aa13.51□□□□□ -0.25
NUP50-203ENST00000407019 CNTFRP26992 372 aa13.51□□□□□ -0.25
NUP50-203ENST00000407019 GRNP28799 593 aaKnown RBP13.51□□□□□ -0.25
NUP50-203ENST00000407019 C22orf15Q8WYQ4 148 aa13.51□□□□□ -0.25
NUP50-203ENST00000407019 MRPL18Q9H0U6 180 aaKnown RBP13.51□□□□□ -0.25
NUP50-203ENST00000407019 RNASE7Q9H1E1 156 aaKnown RBP13.51□□□□□ -0.25
NUP50-203ENST00000407019 SIGLEC9Q9Y336 463 aa13.51□□□□□ -0.25
NUP50-203ENST00000407019 PKDREJQ9NTG1 2253 aa13.51□□□□□ -0.25
NUP50-203ENST00000407019 PPIAL4CA0A0B4J2A2 164 aa13.51□□□□□ -0.25
NUP50-203ENST00000407019 ISLRO14498 428 aa13.51□□□□□ -0.25
NUP50-203ENST00000407019 IGLV2-8P01709 118 aa13.51□□□□□ -0.25
NUP50-203ENST00000407019 PPIAL4GP0DN37 164 aa13.51□□□□□ -0.25
NUP50-203ENST00000407019 PRB3Q04118 309 aaPredicted RBP13.51□□□□□ -0.25
NUP50-203ENST00000407019 ZNF672Q499Z4 452 aaPredicted RBP13.51□□□□□ -0.25
NUP50-203ENST00000407019 OR8I2Q8N0Y5 310 aa13.51□□□□□ -0.25
NUP50-203ENST00000407019 TNFRSF19Q9NS68 423 aa13.51□□□□□ -0.25
NUP50-203ENST00000407019 MSRB2Q9Y3D2 182 aa13.51□□□□□ -0.25
NUP50-203ENST00000407019 C22orf46C9J442 243 aa13.5□□□□□ -0.25
NUP50-203ENST00000407019 CCL21O00585 134 aa13.5□□□□□ -0.25
NUP50-203ENST00000407019 MGST1P10620 155 aaKnown RBP13.5□□□□□ -0.25
NUP50-203ENST00000407019 COX7A1P24310 79 aa13.5□□□□□ -0.25
NUP50-203ENST00000407019 COMPP49747 757 aaPredicted RBP13.5□□□□□ -0.25
NUP50-203ENST00000407019 MFAP2P55001 183 aa13.5□□□□□ -0.25
NUP50-203ENST00000407019 TAS2R60P59551 318 aa13.5□□□□□ -0.25
NUP50-203ENST00000407019 RPL19P84098 196 aaKnown RBP13.5□□□□□ -0.25
NUP50-203ENST00000407019 CDC42EP3Q9UKI2 254 aa13.5□□□□□ -0.25
NUP50-203ENST00000407019 AMMECR1Q9Y4X0 333 aaPredicted RBP13.5□□□□□ -0.25
NUP50-203ENST00000407019 TRBV9A0A0B4J1U6 114 aa13.49□□□□□ -0.25
NUP50-203ENST00000407019 A0A1B0GUS0 222 aa13.49□□□□□ -0.25
NUP50-203ENST00000407019 MOSP00540 346 aa13.49□□□□□ -0.25
NUP50-203ENST00000407019 IER3P46695 156 aa13.49□□□□□ -0.25
NUP50-203ENST00000407019 DEFA6Q01524 100 aa13.49□□□□□ -0.25
NUP50-203ENST00000407019 LINC00305Q7Z4B0 112 aa13.49□□□□□ -0.25
NUP50-203ENST00000407019 ZNF329Q86UD4 541 aa13.49□□□□□ -0.25
NUP50-203ENST00000407019 TMEM256Q8N2U0 113 aa13.49□□□□□ -0.25
NUP50-203ENST00000407019 RPEQ96AT9 228 aa13.49□□□□□ -0.25
NUP50-203ENST00000407019 FXYD5Q96DB9 178 aa13.49□□□□□ -0.25
NUP50-203ENST00000407019 PERPQ96FX8 193 aa13.49□□□□□ -0.25
NUP50-203ENST00000407019 TRGV9Q99603 122 aa13.49□□□□□ -0.25
NUP50-203ENST00000407019 PRO1933Q9H354 126 aa13.49□□□□□ -0.25
NUP50-203ENST00000407019 DMXL2Q8TDJ6 3036 aa13.49□□□□□ -0.25
NUP50-203ENST00000407019 CORTO00230 105 aa13.49□□□□□ -0.25
NUP50-203ENST00000407019 FXYD3Q14802 87 aa13.49□□□□□ -0.25
NUP50-203ENST00000407019 IBA57Q5T440 356 aaKnown RBP13.49□□□□□ -0.25
NUP50-203ENST00000407019 OR8B3Q8NGG8 313 aa13.49□□□□□ -0.25
NUP50-203ENST00000407019 C8orf46Q8TAG6 207 aa13.49□□□□□ -0.25
NUP50-203ENST00000407019 OR8B2Q96RD0 313 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 199.9 ms