RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 DLK1P80370 383 aa8.06□□□□□ -1.12
NUP98-205ENST00000397007 TCTE3Q8IZS6 198 aa8.06□□□□□ -1.12
NUP98-205ENST00000397007 ZC4H2Q9NQZ6 224 aa8.06□□□□□ -1.12
NUP98-205ENST00000397007 OR2C1O95371 312 aa8.06□□□□□ -1.12
NUP98-205ENST00000397007 CYCSP99999 105 aaKnown RBP8.06□□□□□ -1.12
NUP98-205ENST00000397007 ATP5G2Q06055 141 aa8.06□□□□□ -1.12
NUP98-205ENST00000397007 FAM90A2PQ658T7 463 aa8.06□□□□□ -1.12
NUP98-205ENST00000397007 SPSB3Q6PJ21 355 aa8.06□□□□□ -1.12
NUP98-205ENST00000397007 LINC01619G3V211 115 aa8.06□□□□□ -1.12
NUP98-205ENST00000397007 CCL24O00175 119 aa8.06□□□□□ -1.12
NUP98-205ENST00000397007 CSN3P07498 182 aa8.06□□□□□ -1.12
NUP98-205ENST00000397007 EEF1AKMT3Q96AZ1 226 aa8.06□□□□□ -1.12
NUP98-205ENST00000397007 A0A1B0GVG6 124 aa8.05□□□□□ -1.12
NUP98-205ENST00000397007 K7EMT4 169 aa8.05□□□□□ -1.12
NUP98-205ENST00000397007 ACTL6BO94805 426 aa8.05□□□□□ -1.12
NUP98-205ENST00000397007 IFNA17P01571 189 aa8.05□□□□□ -1.12
NUP98-205ENST00000397007 HOXA1P49639 335 aaPredicted RBP8.05□□□□□ -1.12
NUP98-205ENST00000397007 ELLP55199 621 aaPredicted RBP8.05□□□□□ -1.12
NUP98-205ENST00000397007 TMEM252Q8N6L7 170 aa8.05□□□□□ -1.12
NUP98-205ENST00000397007 STPG3Q8N7X2 389 aa8.05□□□□□ -1.12
NUP98-205ENST00000397007 KLHL30-AS1Q8NEE0 82 aa8.05□□□□□ -1.12
NUP98-205ENST00000397007 TMEM190Q8WZ59 177 aa8.05□□□□□ -1.12
NUP98-205ENST00000397007 MS4A10Q96PG2 267 aa8.05□□□□□ -1.12
NUP98-205ENST00000397007 MAGT1Q9H0U3 335 aa8.05□□□□□ -1.12
NUP98-205ENST00000397007 ARV1Q9H2C2 271 aa8.05□□□□□ -1.12
NUP98-205ENST00000397007 TMEM213A2RRL7 107 aa8.05□□□□□ -1.12
NUP98-205ENST00000397007 PF4V1P10720 104 aa8.05□□□□□ -1.12
NUP98-205ENST00000397007 ZNF616Q08AN1 781 aa8.05□□□□□ -1.12
NUP98-205ENST00000397007 DEFB136Q30KP8 78 aa8.05□□□□□ -1.12
NUP98-205ENST00000397007 OR1N2Q8NGR9 330 aa8.05□□□□□ -1.12
NUP98-205ENST00000397007 DLX4Q92988 240 aaPredicted RBP8.05□□□□□ -1.12
NUP98-205ENST00000397007 TRGV9Q99603 122 aa8.05□□□□□ -1.12
NUP98-205ENST00000397007 RANGRFQ9HD47 186 aaPredicted RBP8.05□□□□□ -1.12
NUP98-205ENST00000397007 C21orf62Q9NYP8 219 aa8.05□□□□□ -1.12
NUP98-205ENST00000397007 SSSCA1O60232 199 aa8.05□□□□□ -1.12
NUP98-205ENST00000397007 HOXD3P31249 432 aaPredicted RBP8.05□□□□□ -1.12
NUP98-205ENST00000397007 SLC16A13Q7RTY0 426 aa8.05□□□□□ -1.12
NUP98-205ENST00000397007 OR11H4Q8NGC9 324 aa8.05□□□□□ -1.12
NUP98-205ENST00000397007 HIPK2Q9H2X6 1198 aa8.05□□□□□ -1.12
NUP98-205ENST00000397007 TNFSF18Q9UNG2 199 aa8.05□□□□□ -1.12
NUP98-205ENST00000397007 NDUFA4O00483 81 aa8.04□□□□□ -1.12
NUP98-205ENST00000397007 UNQ9165/PRO28630Q6UXU0 137 aa8.04□□□□□ -1.12
NUP98-205ENST00000397007 C1QL4Q86Z23 238 aa8.04□□□□□ -1.12
NUP98-205ENST00000397007 OR11H1Q8NG94 326 aa8.04□□□□□ -1.12
NUP98-205ENST00000397007 E5RGE8 158 aa8.04□□□□□ -1.12
NUP98-205ENST00000397007 PPP5D1E7EU14 171 aa8.04□□□□□ -1.12
NUP98-205ENST00000397007 EDN2P20800 178 aa8.04□□□□□ -1.12
NUP98-205ENST00000397007 RAP2BP61225 183 aa8.04□□□□□ -1.12
NUP98-205ENST00000397007 BEAN1Q3B7T3 259 aa8.04□□□□□ -1.12
NUP98-205ENST00000397007 TREML4Q6UXN2 200 aa8.04□□□□□ -1.12
NUP98-205ENST00000397007 TMEM182Q6ZP80 229 aaPredicted RBP8.04□□□□□ -1.12
NUP98-205ENST00000397007 OR4F17Q8NGA8 305 aa8.04□□□□□ -1.12
NUP98-205ENST00000397007 OR4F4Q96R69 305 aa8.04□□□□□ -1.12
NUP98-205ENST00000397007 VSIRQ9H7M9 311 aa8.04□□□□□ -1.12
NUP98-205ENST00000397007 PSENENQ9NZ42 101 aa8.04□□□□□ -1.12
NUP98-205ENST00000397007 COL7A1Q02388 2944 aa8.04□□□□□ -1.12
NUP98-205ENST00000397007 HAX1O00165 279 aa8.04□□□□□ -1.12
NUP98-205ENST00000397007 TOMM40O96008 361 aa8.04□□□□□ -1.12
NUP98-205ENST00000397007 IAPPP10997 89 aa8.04□□□□□ -1.12
NUP98-205ENST00000397007 SULT1A1P50225 295 aa8.04□□□□□ -1.12
NUP98-205ENST00000397007 PRR20EP86478 221 aa8.04□□□□□ -1.12
NUP98-205ENST00000397007 PRR20CP86479 221 aa8.04□□□□□ -1.12
NUP98-205ENST00000397007 PRR20DP86480 221 aa8.04□□□□□ -1.12
NUP98-205ENST00000397007 PRR20BP86481 221 aa8.04□□□□□ -1.12
NUP98-205ENST00000397007 PRR20AP86496 221 aa8.04□□□□□ -1.12
NUP98-205ENST00000397007 BAXQ07812 192 aa8.04□□□□□ -1.12
NUP98-205ENST00000397007 C3orf56Q8N813 242 aa8.04□□□□□ -1.12
NUP98-205ENST00000397007 OR1S2Q8NGQ3 325 aa8.04□□□□□ -1.12
NUP98-205ENST00000397007 THYN1Q9P016 225 aa8.04□□□□□ -1.12
NUP98-205ENST00000397007 C13orf42A0A1B0GVH6 325 aa8.03□□□□□ -1.12
NUP98-205ENST00000397007 OR8U8P0C7N1 319 aa8.03□□□□□ -1.12
NUP98-205ENST00000397007 SUB1P53999 127 aaKnown RBP eCLIP8.03□□□□□ -1.12
NUP98-205ENST00000397007 SLURP1P55000 103 aa8.03□□□□□ -1.12
NUP98-205ENST00000397007 TMEM144Q7Z5S9 345 aa8.03□□□□□ -1.12
NUP98-205ENST00000397007 NEURL2Q9BR09 285 aa8.03□□□□□ -1.12
NUP98-205ENST00000397007 WFDC1Q9HC57 220 aa8.03□□□□□ -1.12
NUP98-205ENST00000397007 CEBPZOSA8MTT3 80 aa8.03□□□□□ -1.12
NUP98-205ENST00000397007 MRPS12O15235 138 aaKnown RBP8.03□□□□□ -1.12
NUP98-205ENST00000397007 LINC00869P0C866 280 aa8.03□□□□□ -1.12
NUP98-205ENST00000397007 NOXA1Q86UR1 476 aa8.03□□□□□ -1.12
NUP98-205ENST00000397007 WDR83OSQ9Y284 106 aa8.03□□□□□ -1.12
NUP98-205ENST00000397007 HSPB11Q9Y547 144 aa8.03□□□□□ -1.12
NUP98-205ENST00000397007 IGLV1-51P01701 117 aa8.02□□□□□ -1.12
NUP98-205ENST00000397007 CLEC3BP05452 202 aa8.02□□□□□ -1.12
NUP98-205ENST00000397007 EWSR1Q01844 656 aaKnown RBP eCLIP8.02□□□□□ -1.12
NUP98-205ENST00000397007 PDCD10Q9BUL8 212 aa8.02□□□□□ -1.12
NUP98-205ENST00000397007 CYTL1Q9NRR1 136 aa8.02□□□□□ -1.12
NUP98-205ENST00000397007 MRPL27Q9P0M9 148 aaKnown RBP8.02□□□□□ -1.12
NUP98-205ENST00000397007 HMSDA8MTL9 139 aa8.02□□□□□ -1.13
NUP98-205ENST00000397007 M0QZ24 198 aa8.02□□□□□ -1.13
NUP98-205ENST00000397007 GGCTO75223 188 aaKnown RBP8.02□□□□□ -1.13
NUP98-205ENST00000397007 CRYBB3P26998 211 aa8.02□□□□□ -1.13
NUP98-205ENST00000397007 MFAP4P55083 255 aa8.02□□□□□ -1.13
NUP98-205ENST00000397007 ZNF345Q14585 488 aa8.02□□□□□ -1.13
NUP98-205ENST00000397007 DCUN1D4Q92564 292 aa8.02□□□□□ -1.13
NUP98-205ENST00000397007 MED28Q9H204 178 aa8.02□□□□□ -1.13
NUP98-205ENST00000397007 HEYLQ9NQ87 328 aaPredicted RBP8.02□□□□□ -1.13
NUP98-205ENST00000397007 STRAPQ9Y3F4 350 aaKnown RBP8.02□□□□□ -1.13
NUP98-205ENST00000397007 WRBO00258 174 aa8.02□□□□□ -1.13
NUP98-205ENST00000397007 MGST2Q99735 147 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms