RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 NOTCH1P46531 2555 aa0.87□□□□□ -2.27
RNU6-560P-201ENST00000364007 TRAV9-1A0A075B6T8 112 aa0.87□□□□□ -2.27
RNU6-560P-201ENST00000364007 C19orf84I3L1E1 186 aa0.87□□□□□ -2.27
RNU6-560P-201ENST00000364007 ZNF93P35789 620 aaPredicted RBP0.87□□□□□ -2.27
RNU6-560P-201ENST00000364007 CDC42P60953 191 aa0.87□□□□□ -2.27
RNU6-560P-201ENST00000364007 IMPG1Q17R60 797 aa0.87□□□□□ -2.27
RNU6-560P-201ENST00000364007 ACOT6Q3I5F7 207 aaPredicted RBP0.87□□□□□ -2.27
RNU6-560P-201ENST00000364007 DPPA3Q6W0C5 159 aa0.87□□□□□ -2.27
RNU6-560P-201ENST00000364007 OTUD6BQ8N6M0 293 aa0.87□□□□□ -2.27
RNU6-560P-201ENST00000364007 SIGLECL1Q8N7X8 197 aa0.87□□□□□ -2.27
RNU6-560P-201ENST00000364007 OBSCN-AS1Q96MR7 158 aa0.87□□□□□ -2.27
RNU6-560P-201ENST00000364007 TMEM147Q9BVK8 224 aa0.87□□□□□ -2.27
RNU6-560P-201ENST00000364007 SLC39A9Q9NUM3 307 aa0.87□□□□□ -2.27
RNU6-560P-201ENST00000364007 MRPL27Q9P0M9 148 aaKnown RBP0.87□□□□□ -2.27
RNU6-560P-201ENST00000364007 ERGIC3Q9Y282 383 aa0.87□□□□□ -2.27
RNU6-560P-201ENST00000364007 TMEM56-RWDD3S4R434 201 aa0.87□□□□□ -2.27
RNU6-560P-201ENST00000364007 CHD3Q12873 2000 aaKnown RBP0.87□□□□□ -2.27
RNU6-560P-201ENST00000364007 A0A087WX48 190 aa0.86□□□□□ -2.27
RNU6-560P-201ENST00000364007 TRBV6-7A0A0A0MS04 114 aa0.86□□□□□ -2.27
RNU6-560P-201ENST00000364007 IGKV1-9A0A0C4DH69 117 aa0.86□□□□□ -2.27
RNU6-560P-201ENST00000364007 FAM236DA0A1B0GTK5 79 aa0.86□□□□□ -2.27
RNU6-560P-201ENST00000364007 OR4C46A6NHA9 309 aa0.86□□□□□ -2.27
RNU6-560P-201ENST00000364007 M0R036 132 aa0.86□□□□□ -2.27
RNU6-560P-201ENST00000364007 OR2T1O43869 369 aa0.86□□□□□ -2.27
RNU6-560P-201ENST00000364007 LYPLA2O95372 231 aa0.86□□□□□ -2.27
RNU6-560P-201ENST00000364007 CRYZL1O95825 349 aa0.86□□□□□ -2.27
RNU6-560P-201ENST00000364007 FAM236CP0DP71 79 aa0.86□□□□□ -2.27
RNU6-560P-201ENST00000364007 SSR2P43308 183 aa0.86□□□□□ -2.27
RNU6-560P-201ENST00000364007 RHEBQ15382 184 aa0.86□□□□□ -2.27
RNU6-560P-201ENST00000364007 C8orf76Q96K31 380 aa0.86□□□□□ -2.27
RNU6-560P-201ENST00000364007 ULBP3Q9BZM4 244 aa0.86□□□□□ -2.27
RNU6-560P-201ENST00000364007 ADCY9O60503 1353 aa0.85□□□□□ -2.27
RNU6-560P-201ENST00000364007 ROBO3Q96MS0 1386 aa0.85□□□□□ -2.27
RNU6-560P-201ENST00000364007 TRAV26-2A0A0B4J265 109 aa0.85□□□□□ -2.27
RNU6-560P-201ENST00000364007 A0A0D9SG52 128 aa0.85□□□□□ -2.27
RNU6-560P-201ENST00000364007 PQLC2LA1A4F0 135 aa0.85□□□□□ -2.27
RNU6-560P-201ENST00000364007 CLDN24A6NM45 220 aa0.85□□□□□ -2.27
RNU6-560P-201ENST00000364007 OR1I1O60431 355 aa0.85□□□□□ -2.27
RNU6-560P-201ENST00000364007 NIPSNAP2O75323 286 aa0.85□□□□□ -2.27
RNU6-560P-201ENST00000364007 OR2J2O76002 312 aa0.85□□□□□ -2.27
RNU6-560P-201ENST00000364007 IFNA10P01566 189 aa0.85□□□□□ -2.27
RNU6-560P-201ENST00000364007 RNASE10Q5GAN6 216 aaKnown RBP0.85□□□□□ -2.27
RNU6-560P-201ENST00000364007 SPANXN5Q5MJ07 72 aa0.85□□□□□ -2.27
RNU6-560P-201ENST00000364007 PTRHD1Q6GMV3 140 aaKnown RBP0.85□□□□□ -2.27
RNU6-560P-201ENST00000364007 OOSP2Q86WS3 158 aa0.85□□□□□ -2.27
RNU6-560P-201ENST00000364007 PHF13Q86YI8 300 aaPredicted RBP0.85□□□□□ -2.27
RNU6-560P-201ENST00000364007 HIST3H2BBQ8N257 126 aa0.85□□□□□ -2.27
RNU6-560P-201ENST00000364007 CLDN22Q8N7P3 220 aa0.85□□□□□ -2.27
RNU6-560P-201ENST00000364007 ARL5BQ96KC2 179 aa0.85□□□□□ -2.27
RNU6-560P-201ENST00000364007 VPS29Q9UBQ0 182 aa0.85□□□□□ -2.27
RNU6-560P-201ENST00000364007 NOSIPQ9Y314 301 aaKnown RBP0.85□□□□□ -2.27
RNU6-560P-201ENST00000364007 ALPK3Q96L96 1907 aa0.85□□□□□ -2.27
RNU6-560P-201ENST00000364007 PEAK1Q9H792 1746 aa0.84□□□□□ -2.27
RNU6-560P-201ENST00000364007 SERPINA6P08185 405 aa0.84□□□□□ -2.27
RNU6-560P-201ENST00000364007 COX6A1P12074 109 aa0.84□□□□□ -2.27
RNU6-560P-201ENST00000364007 MIFP14174 115 aa0.84□□□□□ -2.27
RNU6-560P-201ENST00000364007 PDE6HQ13956 83 aa0.84□□□□□ -2.27
RNU6-560P-201ENST00000364007 KRTAP5-10Q6L8G5 202 aa0.84□□□□□ -2.27
RNU6-560P-201ENST00000364007 DCUN1D1Q96GG9 259 aa0.84□□□□□ -2.27
RNU6-560P-201ENST00000364007 KLK9Q9UKQ9 250 aa0.84□□□□□ -2.27
RNU6-560P-201ENST00000364007 KIAA1549Q9HCM3 1950 aa0.84□□□□□ -2.28
RNU6-560P-201ENST00000364007 NEO1Q92859 1461 aa0.84□□□□□ -2.28
RNU6-560P-201ENST00000364007 E9PCH4 1651 aa0.84□□□□□ -2.28
RNU6-560P-201ENST00000364007 LOC110117498A0A087WWA1 95 aa0.83□□□□□ -2.28
RNU6-560P-201ENST00000364007 TRAV3A0A0B4J244 114 aa0.83□□□□□ -2.28
RNU6-560P-201ENST00000364007 CNIH1O95406 144 aa0.83□□□□□ -2.28
RNU6-560P-201ENST00000364007 RPS17P08708 135 aaKnown RBP0.83□□□□□ -2.28
RNU6-560P-201ENST00000364007 MGST1P10620 155 aaKnown RBP0.83□□□□□ -2.28
RNU6-560P-201ENST00000364007 CCDC42Q96M95 316 aa0.83□□□□□ -2.28
RNU6-560P-201ENST00000364007 MRPL57Q9BQC6 102 aaKnown RBP0.83□□□□□ -2.28
RNU6-560P-201ENST00000364007 TAS2R4Q9NYW5 299 aa0.83□□□□□ -2.28
RNU6-560P-201ENST00000364007 ZFP30Q9Y2G7 519 aa0.83□□□□□ -2.28
RNU6-560P-201ENST00000364007 TRBV6-8A0A0A6YYG3 113 aa0.82□□□□□ -2.28
RNU6-560P-201ENST00000364007 PIRO00625 290 aa0.82□□□□□ -2.28
RNU6-560P-201ENST00000364007 HYPMO75409 117 aa0.82□□□□□ -2.28
RNU6-560P-201ENST00000364007 TTRP02766 147 aa0.82□□□□□ -2.28
RNU6-560P-201ENST00000364007 SMIM10L2AP0DMW4 78 aa0.82□□□□□ -2.28
RNU6-560P-201ENST00000364007 SMIM10L2BP0DMW5 78 aa0.82□□□□□ -2.28
RNU6-560P-201ENST00000364007 RAB4BP61018 213 aa0.82□□□□□ -2.28
RNU6-560P-201ENST00000364007 TRAPPC5Q8IUR0 188 aa0.82□□□□□ -2.28
RNU6-560P-201ENST00000364007 OSTCQ9NRP0 149 aa0.82□□□□□ -2.28
RNU6-560P-201ENST00000364007 ARHGEF28Q8N1W1 1705 aaKnown RBP0.81□□□□□ -2.28
RNU6-560P-201ENST00000364007 LYZL6O75951 148 aa0.81□□□□□ -2.28
RNU6-560P-201ENST00000364007 UBL3O95164 117 aa0.81□□□□□ -2.28
RNU6-560P-201ENST00000364007 TCL1BO95988 128 aa0.81□□□□□ -2.28
RNU6-560P-201ENST00000364007 RHOGP84095 191 aa0.81□□□□□ -2.28
RNU6-560P-201ENST00000364007 LINC01554Q52M75 96 aa0.81□□□□□ -2.28
RNU6-560P-201ENST00000364007 OR8J2Q8NGG1 315 aa0.81□□□□□ -2.28
RNU6-560P-201ENST00000364007 ZNF418Q8TF45 676 aaPredicted RBP0.81□□□□□ -2.28
RNU6-560P-201ENST00000364007 GPR146Q96CH1 333 aa0.81□□□□□ -2.28
RNU6-560P-201ENST00000364007 MIXL1Q9H2W2 232 aa0.81□□□□□ -2.28
RNU6-560P-201ENST00000364007 MED1Q15648 1581 aaPredicted RBP0.81□□□□□ -2.28
RNU6-560P-201ENST00000364007 A0A087WUJ7 227 aa0.8□□□□□ -2.28
RNU6-560P-201ENST00000364007 SMIM23A6NLE4 172 aa0.8□□□□□ -2.28
RNU6-560P-201ENST00000364007 KPNA3O00505 521 aaPredicted RBP0.8□□□□□ -2.28
RNU6-560P-201ENST00000364007 SULT1B1O43704 296 aa0.8□□□□□ -2.28
RNU6-560P-201ENST00000364007 OR2B3O76000 313 aa0.8□□□□□ -2.28
RNU6-560P-201ENST00000364007 RBP1P09455 135 aa0.8□□□□□ -2.28
RNU6-560P-201ENST00000364007 BAALC-AS2P0C853 105 aa0.8□□□□□ -2.28
RNU6-560P-201ENST00000364007 RANP62826 216 aaKnown RBP0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms