RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 ZNF843Q8N446 348 aa13.36□□□□□ -0.27
SAMM50-201ENST00000350028 C11orf52Q96A22 123 aa13.36□□□□□ -0.27
SAMM50-201ENST00000350028 PFDN5Q99471 154 aa13.36□□□□□ -0.27
SAMM50-201ENST00000350028 SLC25A33Q9BSK2 321 aa13.36□□□□□ -0.27
SAMM50-201ENST00000350028 IGKV1D-37A0A075B6S9 117 aa13.36□□□□□ -0.27
SAMM50-201ENST00000350028 PSMB11A5LHX3 300 aa13.36□□□□□ -0.27
SAMM50-201ENST00000350028 UBE2CO00762 179 aa13.36□□□□□ -0.27
SAMM50-201ENST00000350028 CD99P14209 185 aa13.36□□□□□ -0.27
SAMM50-201ENST00000350028 LINC01551Q86U37 167 aa13.36□□□□□ -0.27
SAMM50-201ENST00000350028 TMEM37Q8WXS4 190 aa13.36□□□□□ -0.27
SAMM50-201ENST00000350028 C22orf15Q8WYQ4 148 aa13.36□□□□□ -0.27
SAMM50-201ENST00000350028 MISP3Q96FF7 219 aa13.36□□□□□ -0.27
SAMM50-201ENST00000350028 PYGO2Q9BRQ0 406 aa13.36□□□□□ -0.27
SAMM50-201ENST00000350028 SCO2A0A1W2PP80 73 aa13.35□□□□□ -0.27
SAMM50-201ENST00000350028 TEX22C9J3V5 150 aa13.35□□□□□ -0.27
SAMM50-201ENST00000350028 AP4M1O00189 453 aa13.35□□□□□ -0.27
SAMM50-201ENST00000350028 PPP1R2P9O14990 202 aa13.35□□□□□ -0.27
SAMM50-201ENST00000350028 IGHV2-5P01817 119 aa13.35□□□□□ -0.27
SAMM50-201ENST00000350028 RPL35P42766 123 aaKnown RBP13.35□□□□□ -0.27
SAMM50-201ENST00000350028 GALR1P47211 349 aa13.35□□□□□ -0.27
SAMM50-201ENST00000350028 SSBP2P81877 361 aaPredicted RBP13.35□□□□□ -0.27
SAMM50-201ENST00000350028 PLGLAQ15195 96 aa13.35□□□□□ -0.27
SAMM50-201ENST00000350028 LINC00518Q8N0U6 118 aa13.35□□□□□ -0.27
SAMM50-201ENST00000350028 CFHR4Q92496 578 aa13.35□□□□□ -0.27
SAMM50-201ENST00000350028 ZNF503Q96F45 646 aa13.35□□□□□ -0.27
SAMM50-201ENST00000350028 F11RQ9Y624 299 aaKnown RBP13.35□□□□□ -0.27
SAMM50-201ENST00000350028 OOSP1A8MZH6 123 aa13.34□□□□□ -0.27
SAMM50-201ENST00000350028 C19orf84I3L1E1 186 aa13.34□□□□□ -0.27
SAMM50-201ENST00000350028 COX7A2P2O60397 106 aa13.34□□□□□ -0.27
SAMM50-201ENST00000350028 OR7C2O60412 319 aa13.34□□□□□ -0.27
SAMM50-201ENST00000350028 MFAP2P55001 183 aa13.34□□□□□ -0.27
SAMM50-201ENST00000350028 BPIFB3P59826 476 aa13.34□□□□□ -0.27
SAMM50-201ENST00000350028 KLRD1Q13241 179 aa13.34□□□□□ -0.27
SAMM50-201ENST00000350028 SRSF12Q8WXF0 261 aaKnown RBP13.34□□□□□ -0.27
SAMM50-201ENST00000350028 TRGV9Q99603 122 aa13.34□□□□□ -0.27
SAMM50-201ENST00000350028 DERL1Q9BUN8 251 aa13.34□□□□□ -0.27
SAMM50-201ENST00000350028 MRPL36Q9P0J6 103 aaKnown RBP13.34□□□□□ -0.27
SAMM50-201ENST00000350028 NDUFS7O75251 213 aa13.33□□□□□ -0.27
SAMM50-201ENST00000350028 MOSP00540 346 aa13.33□□□□□ -0.27
SAMM50-201ENST00000350028 SRP14P37108 136 aaKnown RBP13.33□□□□□ -0.27
SAMM50-201ENST00000350028 C10orf113Q5VZT2 155 aa13.33□□□□□ -0.27
SAMM50-201ENST00000350028 TMEM116Q8NCL8 245 aa13.33□□□□□ -0.27
SAMM50-201ENST00000350028 NPBQ8NG41 125 aa13.33□□□□□ -0.27
SAMM50-201ENST00000350028 OR4X1Q8NH49 305 aa13.33□□□□□ -0.27
SAMM50-201ENST00000350028 HILPDAQ9Y5L2 63 aa13.33□□□□□ -0.27
SAMM50-201ENST00000350028 FCN1O00602 326 aa13.33□□□□□ -0.28
SAMM50-201ENST00000350028 NBR2O15453 112 aa13.33□□□□□ -0.28
SAMM50-201ENST00000350028 MMDQ15546 238 aa13.33□□□□□ -0.28
SAMM50-201ENST00000350028 MINOS1Q5TGZ0 78 aa13.33□□□□□ -0.28
SAMM50-201ENST00000350028 CCDC144NLQ6NUI1 221 aa13.33□□□□□ -0.28
SAMM50-201ENST00000350028 VMO1Q7Z5L0 202 aa13.33□□□□□ -0.28
SAMM50-201ENST00000350028 OR5T1Q8NG75 326 aa13.33□□□□□ -0.28
SAMM50-201ENST00000350028 FAM167A-AS1Q96KT0 104 aa13.33□□□□□ -0.28
SAMM50-201ENST00000350028 TNFRSF19Q9NS68 423 aa13.33□□□□□ -0.28
SAMM50-201ENST00000350028 LY96Q9Y6Y9 160 aa13.33□□□□□ -0.28
SAMM50-201ENST00000350028 MINOS1-NBL1R4GNA1 71 aa13.33□□□□□ -0.28
SAMM50-201ENST00000350028 ELOA3CA0A087WX78 387 aaPredicted RBP13.32□□□□□ -0.28
SAMM50-201ENST00000350028 A0A1W2PRE2 83 aa13.32□□□□□ -0.28
SAMM50-201ENST00000350028 C9JCJ5 164 aa13.32□□□□□ -0.28
SAMM50-201ENST00000350028 NDUFA3O95167 84 aa13.32□□□□□ -0.28
SAMM50-201ENST00000350028 IGHV3-48P01763 117 aa13.32□□□□□ -0.28
SAMM50-201ENST00000350028 ZFP36P26651 326 aaKnown RBP13.32□□□□□ -0.28
SAMM50-201ENST00000350028 ZNF90Q03938 601 aa13.32□□□□□ -0.28
SAMM50-201ENST00000350028 FABP9Q0Z7S8 132 aa13.32□□□□□ -0.28
SAMM50-201ENST00000350028 SSX2Q16385 188 aa13.32□□□□□ -0.28
SAMM50-201ENST00000350028 LHFPL4Q7Z7J7 247 aa13.32□□□□□ -0.28
SAMM50-201ENST00000350028 SLC25A2Q9BXI2 301 aa13.32□□□□□ -0.28
SAMM50-201ENST00000350028 FAM208BQ5VWN6 2430 aa13.31□□□□□ -0.28
SAMM50-201ENST00000350028 COL12A1Q99715 3063 aa13.31□□□□□ -0.28
SAMM50-201ENST00000350028 UBR5O95071 2799 aaPredicted RBP13.31□□□□□ -0.28
SAMM50-201ENST00000350028 CNIH1O95406 144 aa13.31□□□□□ -0.28
SAMM50-201ENST00000350028 TRGC2P03986 189 aa13.31□□□□□ -0.28
SAMM50-201ENST00000350028 PATE2Q6UY27 113 aa13.31□□□□□ -0.28
SAMM50-201ENST00000350028 NECAP1Q8NC96 275 aa13.31□□□□□ -0.28
SAMM50-201ENST00000350028 OR2T10Q8NGZ9 312 aa13.31□□□□□ -0.28
SAMM50-201ENST00000350028 EAF1Q96JC9 268 aaPredicted RBP13.31□□□□□ -0.28
SAMM50-201ENST00000350028 SRD5A3Q9H8P0 318 aa13.31□□□□□ -0.28
SAMM50-201ENST00000350028 TRBV20OR9-2A0A075B6H5 130 aa13.3□□□□□ -0.28
SAMM50-201ENST00000350028 MDFIC2A0A1B0GVS7 189 aa13.3□□□□□ -0.28
SAMM50-201ENST00000350028 GOSR1O95249 250 aa13.3□□□□□ -0.28
SAMM50-201ENST00000350028 KCNIP4Q6PIL6 250 aa13.3□□□□□ -0.28
SAMM50-201ENST00000350028 OR5AU1Q8NGC0 362 aa13.3□□□□□ -0.28
SAMM50-201ENST00000350028 IMMP2LQ96T52 175 aa13.3□□□□□ -0.28
SAMM50-201ENST00000350028 SIRPDQ9H106 197 aa13.3□□□□□ -0.28
SAMM50-201ENST00000350028 TRAV5A0A0B4J249 113 aa13.3□□□□□ -0.28
SAMM50-201ENST00000350028 OVOL3O00110 214 aa13.3□□□□□ -0.28
SAMM50-201ENST00000350028 GGCTO75223 188 aaKnown RBP13.3□□□□□ -0.28
SAMM50-201ENST00000350028 S100A8P05109 93 aa13.3□□□□□ -0.28
SAMM50-201ENST00000350028 APELAP0DMC3 54 aa13.3□□□□□ -0.28
SAMM50-201ENST00000350028 HOXB4P17483 251 aaPredicted RBP13.3□□□□□ -0.28
SAMM50-201ENST00000350028 LGALS4P56470 323 aa13.3□□□□□ -0.28
SAMM50-201ENST00000350028 OR1L6Q8NGR2 347 aa13.3□□□□□ -0.28
SAMM50-201ENST00000350028 OCC1Q8TAD7 63 aa13.3□□□□□ -0.28
SAMM50-201ENST00000350028 BTF3L4Q96K17 158 aa13.3□□□□□ -0.28
SAMM50-201ENST00000350028 ZNF355PQ9NSJ1 428 aa13.3□□□□□ -0.28
SAMM50-201ENST00000350028 MYO18BQ8IUG5 2567 aa13.29□□□□□ -0.28
SAMM50-201ENST00000350028 IGHV2-70DA0A0C4DH43 119 aa13.29□□□□□ -0.28
SAMM50-201ENST00000350028 A0A1W2PRD5 423 aa13.29□□□□□ -0.28
SAMM50-201ENST00000350028 A0A1W2PRF3 423 aa13.29□□□□□ -0.28
SAMM50-201ENST00000350028 A0A1W2PRM7 423 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms