RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 IGHV2-26A0A0B4J1V2 119 aa14.77□□□□□ -0.04
SHKBP1-201ENST00000291842 C8orf88P0DMB2 117 aa14.77□□□□□ -0.04
SHKBP1-201ENST00000291842 TAS2R45P59539 299 aa14.77□□□□□ -0.04
SHKBP1-201ENST00000291842 LHFPL4Q7Z7J7 247 aa14.77□□□□□ -0.04
SHKBP1-201ENST00000291842 SLC25A2Q9BXI2 301 aa14.77□□□□□ -0.04
SHKBP1-201ENST00000291842 DMRT1Q9Y5R6 373 aa14.77□□□□□ -0.04
SHKBP1-201ENST00000291842 IGHV3-21A0A0B4J1V1 117 aa14.77□□□□□ -0.05
SHKBP1-201ENST00000291842 PSMB11A5LHX3 300 aa14.77□□□□□ -0.05
SHKBP1-201ENST00000291842 CCL21O00585 134 aa14.77□□□□□ -0.05
SHKBP1-201ENST00000291842 COX7A1P24310 79 aa14.77□□□□□ -0.05
SHKBP1-201ENST00000291842 MC5RP33032 325 aa14.77□□□□□ -0.05
SHKBP1-201ENST00000291842 GNG4P50150 75 aa14.77□□□□□ -0.05
SHKBP1-201ENST00000291842 ERVFC1-1P60608 527 aa14.77□□□□□ -0.05
SHKBP1-201ENST00000291842 IMMP2LQ96T52 175 aa14.77□□□□□ -0.05
SHKBP1-201ENST00000291842 DNAJC4Q9NNZ3 241 aa14.77□□□□□ -0.05
SHKBP1-201ENST00000291842 PYYP10082 97 aa14.76□□□□□ -0.05
SHKBP1-201ENST00000291842 OR5AU1Q8NGC0 362 aa14.76□□□□□ -0.05
SHKBP1-201ENST00000291842 FAM167A-AS1Q96KT0 104 aa14.76□□□□□ -0.05
SHKBP1-201ENST00000291842 PRDM13Q9H4Q3 707 aa14.76□□□□□ -0.05
SHKBP1-201ENST00000291842 RAXQ9Y2V3 346 aa14.76□□□□□ -0.05
SHKBP1-201ENST00000291842 C9JCJ5 164 aa14.76□□□□□ -0.05
SHKBP1-201ENST00000291842 CNN1P51911 297 aaKnown RBP14.76□□□□□ -0.05
SHKBP1-201ENST00000291842 SUB1P53999 127 aaKnown RBP eCLIP14.76□□□□□ -0.05
SHKBP1-201ENST00000291842 CASP6P55212 293 aa14.76□□□□□ -0.05
SHKBP1-201ENST00000291842 TNXAQ16473 311 aa14.76□□□□□ -0.05
SHKBP1-201ENST00000291842 ZNF841Q6ZN19 808 aa14.76□□□□□ -0.05
SHKBP1-201ENST00000291842 MISP3Q96FF7 219 aa14.76□□□□□ -0.05
SHKBP1-201ENST00000291842 IGKV1D-37A0A075B6S9 117 aa14.75□□□□□ -0.05
SHKBP1-201ENST00000291842 INS-IGF2F8WCM5 200 aa14.75□□□□□ -0.05
SHKBP1-201ENST00000291842 COX7A2P2O60397 106 aa14.75□□□□□ -0.05
SHKBP1-201ENST00000291842 FRMD6-AS1P0C7T7 363 aa14.75□□□□□ -0.05
SHKBP1-201ENST00000291842 UBE2L3P68036 154 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-201ENST00000291842 ASPHD1Q5U4P2 390 aa14.75□□□□□ -0.05
SHKBP1-201ENST00000291842 PATE2Q6UY27 113 aa14.75□□□□□ -0.05
SHKBP1-201ENST00000291842 RNASEH2CQ8TDP1 164 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-201ENST00000291842 C19orf24Q9BVV8 132 aa14.75□□□□□ -0.05
SHKBP1-201ENST00000291842 RNASE7Q9H1E1 156 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-201ENST00000291842 ZNF355PQ9NSJ1 428 aa14.75□□□□□ -0.05
SHKBP1-201ENST00000291842 MOSP00540 346 aa14.75□□□□□ -0.05
SHKBP1-201ENST00000291842 HIST1H1BP16401 226 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-201ENST00000291842 COA6Q5JTJ3 125 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-201ENST00000291842 PNKDQ8N490 385 aa14.75□□□□□ -0.05
SHKBP1-201ENST00000291842 INSIG2Q9Y5U4 225 aa14.75□□□□□ -0.05
SHKBP1-201ENST00000291842 CBLN1P23435 193 aa14.74□□□□□ -0.05
SHKBP1-201ENST00000291842 MFAP2P55001 183 aa14.74□□□□□ -0.05
SHKBP1-201ENST00000291842 LINC00479Q96M42 142 aa14.74□□□□□ -0.05
SHKBP1-201ENST00000291842 IL36BQ9NZH7 164 aa14.74□□□□□ -0.05
SHKBP1-201ENST00000291842 ABCA1O95477 2261 aa14.74□□□□□ -0.05
SHKBP1-201ENST00000291842 ARHGAP32A7KAX9 2087 aa14.74□□□□□ -0.05
SHKBP1-201ENST00000291842 CSMD1Q96PZ7 3565 aa14.74□□□□□ -0.05
SHKBP1-201ENST00000291842 PPIAL4CA0A0B4J2A2 164 aa14.74□□□□□ -0.05
SHKBP1-201ENST00000291842 TCRBV4S1A1TA0A5B7 111 aa14.74□□□□□ -0.05
SHKBP1-201ENST00000291842 IGLC7A0M8Q6 106 aa14.74□□□□□ -0.05
SHKBP1-201ENST00000291842 SPINK4O60575 86 aa14.74□□□□□ -0.05
SHKBP1-201ENST00000291842 IGLV1-47P01700 117 aa14.74□□□□□ -0.05
SHKBP1-201ENST00000291842 PPIAL4GP0DN37 164 aa14.74□□□□□ -0.05
SHKBP1-201ENST00000291842 ADMP35318 185 aa14.74□□□□□ -0.05
SHKBP1-201ENST00000291842 CA7P43166 264 aa14.74□□□□□ -0.05
SHKBP1-201ENST00000291842 LGALS7P47929 136 aa14.74□□□□□ -0.05
SHKBP1-201ENST00000291842 PDLIM4P50479 330 aa14.74□□□□□ -0.05
SHKBP1-201ENST00000291842 FXYD3Q14802 87 aa14.74□□□□□ -0.05
SHKBP1-201ENST00000291842 C10orf113Q5VZT2 155 aa14.74□□□□□ -0.05
SHKBP1-201ENST00000291842 NHLRC2Q8NBF2 726 aa14.74□□□□□ -0.05
SHKBP1-201ENST00000291842 IGHV1-3A0A0C4DH29 117 aa14.73□□□□□ -0.05
SHKBP1-201ENST00000291842 MSRB2Q9Y3D2 182 aa14.73□□□□□ -0.05
SHKBP1-201ENST00000291842 BUB1B-PAK6H3BSN5 160 aa14.73□□□□□ -0.05
SHKBP1-201ENST00000291842 PRRX1P54821 245 aa14.73□□□□□ -0.05
SHKBP1-201ENST00000291842 ZNF672Q499Z4 452 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-201ENST00000291842 TMEM256Q8N2U0 113 aa14.73□□□□□ -0.05
SHKBP1-201ENST00000291842 IGFBPL1Q8WX77 278 aa14.73□□□□□ -0.05
SHKBP1-201ENST00000291842 MRPL32Q9BYC8 188 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-201ENST00000291842 ARL2-SNX15V9GYD0 113 aa14.73□□□□□ -0.05
SHKBP1-201ENST00000291842 V9GYV3 84 aa14.73□□□□□ -0.05
SHKBP1-201ENST00000291842 HRNRQ86YZ3 2850 aaPredicted RBP14.72□□□□□ -0.05
SHKBP1-201ENST00000291842 GRIFINA4D1Z8 144 aa14.72□□□□□ -0.05
SHKBP1-201ENST00000291842 C22orf46C9J442 243 aa14.72□□□□□ -0.05
SHKBP1-201ENST00000291842 MGST1P10620 155 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-201ENST00000291842 ORM2P19652 201 aa14.72□□□□□ -0.05
SHKBP1-201ENST00000291842 MMD2Q8IY49 270 aa14.72□□□□□ -0.05
SHKBP1-201ENST00000291842 COL25A1Q9BXS0 654 aaPredicted RBP14.72□□□□□ -0.05
SHKBP1-201ENST00000291842 PRO1933Q9H354 126 aa14.72□□□□□ -0.05
SHKBP1-201ENST00000291842 COL6A6A6NMZ7 2263 aa14.72□□□□□ -0.05
SHKBP1-201ENST00000291842 A0A1W2PRE2 83 aa14.71□□□□□ -0.05
SHKBP1-201ENST00000291842 GZMBP10144 247 aa14.71□□□□□ -0.05
SHKBP1-201ENST00000291842 RPL27AP46776 148 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-201ENST00000291842 SLC35B1P78383 322 aa14.71□□□□□ -0.05
SHKBP1-201ENST00000291842 PAXXQ9BUH6 204 aa14.71□□□□□ -0.05
SHKBP1-201ENST00000291842 CLEC7AQ9BXN2 247 aa14.71□□□□□ -0.05
SHKBP1-201ENST00000291842 ONECUT1Q9UBC0 465 aa14.71□□□□□ -0.05
SHKBP1-201ENST00000291842 LY96Q9Y6Y9 160 aa14.71□□□□□ -0.05
SHKBP1-201ENST00000291842 NUPR1O60356 82 aa14.71□□□□□ -0.05
SHKBP1-201ENST00000291842 RPEL1Q2QD12 228 aa14.71□□□□□ -0.05
SHKBP1-201ENST00000291842 TIGITQ495A1 244 aa14.71□□□□□ -0.05
SHKBP1-201ENST00000291842 FAM209BQ5JX69 171 aa14.71□□□□□ -0.05
SHKBP1-201ENST00000291842 OR8I2Q8N0Y5 310 aa14.71□□□□□ -0.05
SHKBP1-201ENST00000291842 GSX1Q9H4S2 264 aaPredicted RBP14.71□□□□□ -0.05
SHKBP1-201ENST00000291842 SIGLEC9Q9Y336 463 aa14.71□□□□□ -0.05
SHKBP1-201ENST00000291842 IER3P46695 156 aa14.7□□□□□ -0.06
SHKBP1-201ENST00000291842 LINC00305Q7Z4B0 112 aa14.7□□□□□ -0.06
SHKBP1-201ENST00000291842 TEX45Q8NA69 505 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms