RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 FCN1O00602 326 aa18.56■□□□□ 0.56
MSX2-201ENST00000239243 BPIFB3P59826 476 aa18.56■□□□□ 0.56
MSX2-201ENST00000239243 YPEL4Q96NS1 127 aa18.56■□□□□ 0.56
MSX2-201ENST00000239243 UBE2E1P51965 193 aa18.55■□□□□ 0.56
MSX2-201ENST00000239243 MFAP2P55001 183 aa18.55■□□□□ 0.56
MSX2-201ENST00000239243 RAB5BP61020 215 aa18.55■□□□□ 0.56
MSX2-201ENST00000239243 ADIRFQ15847 76 aa18.55■□□□□ 0.56
MSX2-201ENST00000239243 TMEM116Q8NCL8 245 aa18.55■□□□□ 0.56
MSX2-201ENST00000239243 DNAJC4Q9NNZ3 241 aa18.55■□□□□ 0.56
MSX2-201ENST00000239243 CLDN34H7C241 214 aa18.55■□□□□ 0.56
MSX2-201ENST00000239243 PIMREGQ9BSJ6 248 aa18.55■□□□□ 0.56
MSX2-201ENST00000239243 CFAP46Q8IYW2 2715 aa18.55■□□□□ 0.56
MSX2-201ENST00000239243 IGKV1D-37A0A075B6S9 117 aa18.54■□□□□ 0.56
MSX2-201ENST00000239243 C1orf196B1AJZ1 125 aa18.54■□□□□ 0.56
MSX2-201ENST00000239243 C8orf88P0DMB2 117 aa18.54■□□□□ 0.56
MSX2-201ENST00000239243 C5orf64Q2M2E5 130 aa18.54■□□□□ 0.56
MSX2-201ENST00000239243 OR1L6Q8NGR2 347 aa18.54■□□□□ 0.56
MSX2-201ENST00000239243 MALSU1Q96EH3 234 aa18.54■□□□□ 0.56
MSX2-201ENST00000239243 SLC25A33Q9BSK2 321 aa18.54■□□□□ 0.56
MSX2-201ENST00000239243 DOK5Q9P104 306 aa18.54■□□□□ 0.56
MSX2-201ENST00000239243 POLR3KQ9Y2Y1 108 aaPredicted RBP18.54■□□□□ 0.56
MSX2-201ENST00000239243 PSMB11A5LHX3 300 aa18.54■□□□□ 0.56
MSX2-201ENST00000239243 COX7A2P2O60397 106 aa18.54■□□□□ 0.56
MSX2-201ENST00000239243 APELAP0DMC3 54 aa18.54■□□□□ 0.56
MSX2-201ENST00000239243 RPL23P62829 140 aaKnown RBP18.54■□□□□ 0.56
MSX2-201ENST00000239243 EBI3Q14213 229 aa18.54■□□□□ 0.56
MSX2-201ENST00000239243 TMEM37Q8WXS4 190 aa18.54■□□□□ 0.56
MSX2-201ENST00000239243 TRGV9Q99603 122 aa18.54■□□□□ 0.56
MSX2-201ENST00000239243 LPAR2Q9HBW0 351 aa18.54■□□□□ 0.56
MSX2-201ENST00000239243 NDUFS8O00217 210 aa18.53■□□□□ 0.56
MSX2-201ENST00000239243 PLXNB1O43157 2135 aa18.53■□□□□ 0.56
MSX2-201ENST00000239243 UHRF2Q96PU4 802 aa18.53■□□□□ 0.56
MSX2-201ENST00000239243 TBX15Q96SF7 602 aa18.53■□□□□ 0.56
MSX2-201ENST00000239243 TNFRSF19Q9NS68 423 aa18.53■□□□□ 0.56
MSX2-201ENST00000239243 NPPCP23582 126 aa18.53■□□□□ 0.56
MSX2-201ENST00000239243 OR51G1Q8NGK1 321 aa18.53■□□□□ 0.56
MSX2-201ENST00000239243 FAM168AQ92567 244 aa18.53■□□□□ 0.56
MSX2-201ENST00000239243 MRPL36Q9P0J6 103 aaKnown RBP18.53■□□□□ 0.56
MSX2-201ENST00000239243 YTHDF2Q9Y5A9 579 aaKnown RBP18.53■□□□□ 0.56
MSX2-201ENST00000239243 OR7C2O60412 319 aa18.52■□□□□ 0.56
MSX2-201ENST00000239243 IGHV3-48P01763 117 aa18.52■□□□□ 0.56
MSX2-201ENST00000239243 ELOBQ15370 118 aa18.52■□□□□ 0.56
MSX2-201ENST00000239243 NDUFB4O95168 129 aa18.51■□□□□ 0.55
MSX2-201ENST00000239243 ZNF90Q03938 601 aa18.51■□□□□ 0.55
MSX2-201ENST00000239243 KIAA0141Q14154 515 aaPredicted RBP18.51■□□□□ 0.55
MSX2-201ENST00000239243 FXYD3Q14802 87 aa18.51■□□□□ 0.55
MSX2-201ENST00000239243 C10orf113Q5VZT2 155 aa18.51■□□□□ 0.55
MSX2-201ENST00000239243 ELOA3CA0A087WX78 387 aaPredicted RBP18.51■□□□□ 0.55
MSX2-201ENST00000239243 CD24P25063 80 aa18.51■□□□□ 0.55
MSX2-201ENST00000239243 DYNAPQ8N1N2 210 aa18.51■□□□□ 0.55
MSX2-201ENST00000239243 Q8N6K4 173 aa18.51■□□□□ 0.55
MSX2-201ENST00000239243 OR4X1Q8NH49 305 aa18.51■□□□□ 0.55
MSX2-201ENST00000239243 CTRB1P17538 263 aa18.5■□□□□ 0.55
MSX2-201ENST00000239243 CTRB2Q6GPI1 263 aa18.5■□□□□ 0.55
MSX2-201ENST00000239243 WNT10AQ9GZT5 417 aa18.5■□□□□ 0.55
MSX2-201ENST00000239243 DOPEY1Q5JWR5 2465 aa18.49■□□□□ 0.55
MSX2-201ENST00000239243 ZNF562Q6V9R5 426 aa18.49■□□□□ 0.55
MSX2-201ENST00000239243 Q8WTZ3 238 aa18.49■□□□□ 0.55
MSX2-201ENST00000239243 C11orf52Q96A22 123 aa18.49■□□□□ 0.55
MSX2-201ENST00000239243 FAM106CPP0CH98 169 aa18.49■□□□□ 0.55
MSX2-201ENST00000239243 TMEM11P17152 192 aa18.49■□□□□ 0.55
MSX2-201ENST00000239243 BRS3P32247 399 aa18.49■□□□□ 0.55
MSX2-201ENST00000239243 CLEC2AQ6UVW9 174 aa18.49■□□□□ 0.55
MSX2-201ENST00000239243 C19orf35Q6ZS72 473 aa18.49■□□□□ 0.55
MSX2-201ENST00000239243 ANAPC16Q96DE5 110 aa18.49■□□□□ 0.55
MSX2-201ENST00000239243 ZNF503Q96F45 646 aa18.49■□□□□ 0.55
MSX2-201ENST00000239243 URGCP-MRPS24S4R325 110 aa18.49■□□□□ 0.55
MSX2-201ENST00000239243 CACNA1BQ00975 2339 aa18.48■□□□□ 0.55
MSX2-201ENST00000239243 NCBP2LA6PVI3 153 aaKnown RBP18.48■□□□□ 0.55
MSX2-201ENST00000239243 ZNF343Q6P1L6 599 aa18.48■□□□□ 0.55
MSX2-201ENST00000239243 C10orf105Q8TEF2 133 aa18.48■□□□□ 0.55
MSX2-201ENST00000239243 BIN3Q9NQY0 253 aa18.48■□□□□ 0.55
MSX2-201ENST00000239243 C1RLQ9NZP8 487 aa18.48■□□□□ 0.55
MSX2-201ENST00000239243 DMRT1Q9Y5R6 373 aa18.48■□□□□ 0.55
MSX2-201ENST00000239243 SCO2A0A1W2PP80 73 aa18.47■□□□□ 0.55
MSX2-201ENST00000239243 RNF224P0DH78 156 aa18.47■□□□□ 0.55
MSX2-201ENST00000239243 C1QL4Q86Z23 238 aa18.47■□□□□ 0.55
MSX2-201ENST00000239243 I3L2K1 104 aa18.47■□□□□ 0.55
MSX2-201ENST00000239243 ARPC1AQ92747 370 aa18.47■□□□□ 0.55
MSX2-201ENST00000239243 FAM167A-AS1Q96KT0 104 aa18.47■□□□□ 0.55
MSX2-201ENST00000239243 SLC25A2Q9BXI2 301 aa18.47■□□□□ 0.55
MSX2-201ENST00000239243 USP24Q9UPU5 2620 aa18.47■□□□□ 0.55
MSX2-201ENST00000239243 A0A1W2PRE2 83 aa18.46■□□□□ 0.55
MSX2-201ENST00000239243 PRB1P04280 392 aa18.46■□□□□ 0.55
MSX2-201ENST00000239243 ATP5J2P56134 94 aa18.46■□□□□ 0.55
MSX2-201ENST00000239243 OR5AU1Q8NGC0 362 aa18.46■□□□□ 0.55
MSX2-201ENST00000239243 PERPQ96FX8 193 aa18.46■□□□□ 0.55
MSX2-201ENST00000239243 ZNF355PQ9NSJ1 428 aa18.46■□□□□ 0.55
MSX2-201ENST00000239243 H7BYZ3 331 aa18.46■□□□□ 0.55
MSX2-201ENST00000239243 SAA4P35542 130 aa18.46■□□□□ 0.55
MSX2-201ENST00000239243 PATE2Q6UY27 113 aa18.46■□□□□ 0.55
MSX2-201ENST00000239243 C16orf82Q7Z2V1 217 aa18.46■□□□□ 0.55
MSX2-201ENST00000239243 LINC01551Q86U37 167 aa18.46■□□□□ 0.55
MSX2-201ENST00000239243 ZFP82Q8N141 532 aa18.46■□□□□ 0.55
MSX2-201ENST00000239243 STXBP6Q8NFX7 210 aa18.46■□□□□ 0.55
MSX2-201ENST00000239243 DERL1Q9BUN8 251 aa18.46■□□□□ 0.55
MSX2-201ENST00000239243 VWC2LB2RUY7 222 aa18.45■□□□□ 0.54
MSX2-201ENST00000239243 UBE2L3P68036 154 aaKnown RBP18.45■□□□□ 0.54
MSX2-201ENST00000239243 CX3CL1P78423 397 aa18.45■□□□□ 0.54
MSX2-201ENST00000239243 BBC3Q96PG8 261 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms