RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 ZFYVE26Q68DK2 2539 aa11.54□□□□□ -0.56
PRKAB1-201ENST00000229328 CXorf65A6NEN9 183 aa11.54□□□□□ -0.56
PRKAB1-201ENST00000229328 C5orf52A6NGY3 159 aa11.54□□□□□ -0.56
PRKAB1-201ENST00000229328 VENTXO95231 258 aa11.54□□□□□ -0.56
PRKAB1-201ENST00000229328 PRTN3P24158 256 aa11.54□□□□□ -0.56
PRKAB1-201ENST00000229328 TMEM37Q8WXS4 190 aa11.54□□□□□ -0.56
PRKAB1-201ENST00000229328 FUT9Q9Y231 359 aa11.54□□□□□ -0.56
PRKAB1-201ENST00000229328 MED13LQ71F56 2210 aa11.53□□□□□ -0.56
PRKAB1-201ENST00000229328 IGKV1D-37A0A075B6S9 117 aa11.53□□□□□ -0.56
PRKAB1-201ENST00000229328 ODF3BA8MYP8 253 aa11.53□□□□□ -0.56
PRKAB1-201ENST00000229328 NDUFB4O95168 129 aa11.53□□□□□ -0.56
PRKAB1-201ENST00000229328 FLNCQ14315 2725 aa11.53□□□□□ -0.56
PRKAB1-201ENST00000229328 TMEM8BA6NDV4 472 aa11.53□□□□□ -0.56
PRKAB1-201ENST00000229328 TEX22C9J3V5 150 aa11.53□□□□□ -0.56
PRKAB1-201ENST00000229328 PDE6DO43924 150 aa11.53□□□□□ -0.56
PRKAB1-201ENST00000229328 ZNF90Q03938 601 aa11.53□□□□□ -0.56
PRKAB1-201ENST00000229328 CFHR4Q92496 578 aa11.53□□□□□ -0.56
PRKAB1-201ENST00000229328 MALSU1Q96EH3 234 aa11.53□□□□□ -0.56
PRKAB1-201ENST00000229328 ZNF503Q96F45 646 aa11.53□□□□□ -0.56
PRKAB1-201ENST00000229328 MISP3Q96FF7 219 aa11.53□□□□□ -0.56
PRKAB1-201ENST00000229328 RD3LP0DJH9 198 aa11.52□□□□□ -0.57
PRKAB1-201ENST00000229328 EFNA4P52798 201 aa11.52□□□□□ -0.57
PRKAB1-201ENST00000229328 MORN5Q5VZ52 161 aa11.52□□□□□ -0.57
PRKAB1-201ENST00000229328 VMO1Q7Z5L0 202 aa11.52□□□□□ -0.57
PRKAB1-201ENST00000229328 IGHV3-21A0A0B4J1V1 117 aa11.52□□□□□ -0.57
PRKAB1-201ENST00000229328 SCO2A0A1W2PP80 73 aa11.52□□□□□ -0.57
PRKAB1-201ENST00000229328 PSMB11A5LHX3 300 aa11.52□□□□□ -0.57
PRKAB1-201ENST00000229328 CLDN34H7C241 214 aa11.52□□□□□ -0.57
PRKAB1-201ENST00000229328 LCN2P80188 198 aa11.52□□□□□ -0.57
PRKAB1-201ENST00000229328 C9orf152Q5JTZ5 239 aa11.52□□□□□ -0.57
PRKAB1-201ENST00000229328 PVRIGQ6DKI7 326 aa11.52□□□□□ -0.57
PRKAB1-201ENST00000229328 PFDN5Q99471 154 aa11.52□□□□□ -0.57
PRKAB1-201ENST00000229328 TMEM242Q9NWH2 141 aa11.52□□□□□ -0.57
PRKAB1-201ENST00000229328 AURKAIP1Q9NWT8 199 aaPredicted RBP11.52□□□□□ -0.57
PRKAB1-201ENST00000229328 DMRT1Q9Y5R6 373 aa11.52□□□□□ -0.57
PRKAB1-201ENST00000229328 IGHV2-5P01817 119 aa11.51□□□□□ -0.57
PRKAB1-201ENST00000229328 OR5G3P0C626 314 aa11.51□□□□□ -0.57
PRKAB1-201ENST00000229328 RPS10P46783 165 aaKnown RBP11.51□□□□□ -0.57
PRKAB1-201ENST00000229328 RND2P52198 227 aa11.51□□□□□ -0.57
PRKAB1-201ENST00000229328 C16orf82Q7Z2V1 217 aa11.51□□□□□ -0.57
PRKAB1-201ENST00000229328 DYNAPQ8N1N2 210 aa11.51□□□□□ -0.57
PRKAB1-201ENST00000229328 OR5T1Q8NG75 326 aa11.51□□□□□ -0.57
PRKAB1-201ENST00000229328 SLC25A33Q9BSK2 321 aa11.51□□□□□ -0.57
PRKAB1-201ENST00000229328 DOK5Q9P104 306 aa11.51□□□□□ -0.57
PRKAB1-201ENST00000229328 PGPEP1LA6NFU8 196 aa11.51□□□□□ -0.57
PRKAB1-201ENST00000229328 PLGLAQ15195 96 aa11.51□□□□□ -0.57
PRKAB1-201ENST00000229328 MMDQ15546 238 aa11.51□□□□□ -0.57
PRKAB1-201ENST00000229328 ZNF114Q8NC26 417 aa11.51□□□□□ -0.57
PRKAB1-201ENST00000229328 TRAV5A0A0B4J249 113 aa11.5□□□□□ -0.57
PRKAB1-201ENST00000229328 DEFA6Q01524 100 aa11.5□□□□□ -0.57
PRKAB1-201ENST00000229328 SSX2Q16385 188 aa11.5□□□□□ -0.57
PRKAB1-201ENST00000229328 THAP8Q8NA92 274 aa11.5□□□□□ -0.57
PRKAB1-201ENST00000229328 SRSF12Q8WXF0 261 aaKnown RBP11.5□□□□□ -0.57
PRKAB1-201ENST00000229328 TRBV20OR9-2A0A075B6H5 130 aa11.5□□□□□ -0.57
PRKAB1-201ENST00000229328 TCRBV4S1A1TA0A5B7 111 aa11.5□□□□□ -0.57
PRKAB1-201ENST00000229328 F6UZH7 168 aa11.5□□□□□ -0.57
PRKAB1-201ENST00000229328 CLN5O75503 358 aa11.5□□□□□ -0.57
PRKAB1-201ENST00000229328 CRYGCP07315 174 aa11.5□□□□□ -0.57
PRKAB1-201ENST00000229328 PAX2Q02962 417 aa11.5□□□□□ -0.57
PRKAB1-201ENST00000229328 RNF5Q99942 180 aa11.5□□□□□ -0.57
PRKAB1-201ENST00000229328 BPESC1Q9GZL8 116 aa11.5□□□□□ -0.57
PRKAB1-201ENST00000229328 TECRQ9NZ01 308 aaKnown RBP11.5□□□□□ -0.57
PRKAB1-201ENST00000229328 A0A1B0GV90 55 aa11.49□□□□□ -0.57
PRKAB1-201ENST00000229328 MT-CO2P00403 227 aa11.49□□□□□ -0.57
PRKAB1-201ENST00000229328 OR10J4P0C629 311 aa11.49□□□□□ -0.57
PRKAB1-201ENST00000229328 HOXB4P17483 251 aaPredicted RBP11.49□□□□□ -0.57
PRKAB1-201ENST00000229328 CEACAM3P40198 252 aa11.49□□□□□ -0.57
PRKAB1-201ENST00000229328 FABP9Q0Z7S8 132 aa11.49□□□□□ -0.57
PRKAB1-201ENST00000229328 PATE2Q6UY27 113 aa11.49□□□□□ -0.57
PRKAB1-201ENST00000229328 NECAP1Q8NC96 275 aa11.49□□□□□ -0.57
PRKAB1-201ENST00000229328 CTDSP1Q9GZU7 261 aa11.49□□□□□ -0.57
PRKAB1-201ENST00000229328 WNK2Q9Y3S1 2297 aa11.49□□□□□ -0.57
PRKAB1-201ENST00000229328 OR7C2O60412 319 aa11.49□□□□□ -0.57
PRKAB1-201ENST00000229328 MOSP00540 346 aa11.49□□□□□ -0.57
PRKAB1-201ENST00000229328 C1orf122Q6ZSJ8 110 aa11.49□□□□□ -0.57
PRKAB1-201ENST00000229328 LINC01551Q86U37 167 aa11.49□□□□□ -0.57
PRKAB1-201ENST00000229328 OR1P1Q8NH06 330 aa11.49□□□□□ -0.57
PRKAB1-201ENST00000229328 F11RQ9Y624 299 aaKnown RBP11.49□□□□□ -0.57
PRKAB1-201ENST00000229328 OVOL3O00110 214 aa11.48□□□□□ -0.57
PRKAB1-201ENST00000229328 C1QL4Q86Z23 238 aa11.48□□□□□ -0.57
PRKAB1-201ENST00000229328 EAF1Q96JC9 268 aaPredicted RBP11.48□□□□□ -0.57
PRKAB1-201ENST00000229328 FAM167A-AS1Q96KT0 104 aa11.48□□□□□ -0.57
PRKAB1-201ENST00000229328 UHRF2Q96PU4 802 aa11.48□□□□□ -0.57
PRKAB1-201ENST00000229328 TXNDC17Q9BRA2 123 aa11.48□□□□□ -0.57
PRKAB1-201ENST00000229328 C19orf24Q9BVV8 132 aa11.48□□□□□ -0.57
PRKAB1-201ENST00000229328 DNAJC4Q9NNZ3 241 aa11.48□□□□□ -0.57
PRKAB1-201ENST00000229328 NBR2O15453 112 aa11.48□□□□□ -0.57
PRKAB1-201ENST00000229328 LMO4P61968 165 aa11.48□□□□□ -0.57
PRKAB1-201ENST00000229328 HES1Q14469 280 aa11.48□□□□□ -0.57
PRKAB1-201ENST00000229328 MRPL41Q8IXM3 137 aaKnown RBP11.48□□□□□ -0.57
PRKAB1-201ENST00000229328 KIR3DL3Q8N743 410 aa11.48□□□□□ -0.57
PRKAB1-201ENST00000229328 ELOVL1Q9BW60 279 aa11.48□□□□□ -0.57
PRKAB1-201ENST00000229328 SLC25A2Q9BXI2 301 aa11.48□□□□□ -0.57
PRKAB1-201ENST00000229328 SIRPDQ9H106 197 aa11.48□□□□□ -0.57
PRKAB1-201ENST00000229328 GSX1Q9H4S2 264 aaPredicted RBP11.48□□□□□ -0.57
PRKAB1-201ENST00000229328 USP24Q9UPU5 2620 aa11.48□□□□□ -0.57
PRKAB1-201ENST00000229328 USP9XQ93008 2570 aaPredicted RBP11.47□□□□□ -0.57
PRKAB1-201ENST00000229328 C8orf88P0DMB2 117 aa11.47□□□□□ -0.57
PRKAB1-201ENST00000229328 OR4X1Q8NH49 305 aa11.47□□□□□ -0.57
PRKAB1-201ENST00000229328 FAM210BQ96KR6 192 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms