RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 FXYD3Q14802 87 aa11.38□□□□□ -0.59
RTFDC1-201ENST00000023939 FAM78BQ5VT40 261 aa11.38□□□□□ -0.59
RTFDC1-201ENST00000023939 SPATA31B1PQ5VZV4 182 aa11.38□□□□□ -0.59
RTFDC1-201ENST00000023939 CTRB2Q6GPI1 263 aa11.38□□□□□ -0.59
RTFDC1-201ENST00000023939 IQCF2Q8IXL9 164 aa11.38□□□□□ -0.59
RTFDC1-201ENST00000023939 OR4F5Q8NH21 305 aa11.38□□□□□ -0.59
RTFDC1-201ENST00000023939 MISP3Q96FF7 219 aa11.38□□□□□ -0.59
RTFDC1-201ENST00000023939 OR4F4Q96R69 305 aa11.38□□□□□ -0.59
RTFDC1-201ENST00000023939 SDF2L1Q9HCN8 221 aa11.38□□□□□ -0.59
RTFDC1-201ENST00000023939 TECRQ9NZ01 308 aaKnown RBP11.38□□□□□ -0.59
RTFDC1-201ENST00000023939 MRPL36Q9P0J6 103 aaKnown RBP11.38□□□□□ -0.59
RTFDC1-201ENST00000023939 DMRT1Q9Y5R6 373 aa11.38□□□□□ -0.59
RTFDC1-201ENST00000023939 ZNF727A8MUV8 499 aa11.37□□□□□ -0.59
RTFDC1-201ENST00000023939 F6UZH7 168 aa11.37□□□□□ -0.59
RTFDC1-201ENST00000023939 NPFFO15130 113 aa11.37□□□□□ -0.59
RTFDC1-201ENST00000023939 BRS3P32247 399 aa11.37□□□□□ -0.59
RTFDC1-201ENST00000023939 SAA4P35542 130 aa11.37□□□□□ -0.59
RTFDC1-201ENST00000023939 AKR1C3P42330 323 aa11.37□□□□□ -0.59
RTFDC1-201ENST00000023939 TAS2R45P59539 299 aa11.37□□□□□ -0.59
RTFDC1-201ENST00000023939 AKIRIN2Q53H80 203 aa11.37□□□□□ -0.59
RTFDC1-201ENST00000023939 FBLN7Q53RD9 439 aa11.37□□□□□ -0.59
RTFDC1-201ENST00000023939 PQLC2Q6ZP29 291 aa11.37□□□□□ -0.59
RTFDC1-201ENST00000023939 SLC25A33Q9BSK2 321 aa11.37□□□□□ -0.59
RTFDC1-201ENST00000023939 NAT8Q9UHE5 227 aa11.37□□□□□ -0.59
RTFDC1-201ENST00000023939 I3L2K1 104 aa11.36□□□□□ -0.59
RTFDC1-201ENST00000023939 GATA2P23769 480 aaPredicted RBP11.36□□□□□ -0.59
RTFDC1-201ENST00000023939 CD24P25063 80 aa11.36□□□□□ -0.59
RTFDC1-201ENST00000023939 MIR17HGQ75NE6 70 aa11.36□□□□□ -0.59
RTFDC1-201ENST00000023939 OR1L4Q8NGR5 311 aa11.36□□□□□ -0.59
RTFDC1-201ENST00000023939 TMEM37Q8WXS4 190 aa11.36□□□□□ -0.59
RTFDC1-201ENST00000023939 PFDN5Q99471 154 aa11.36□□□□□ -0.59
RTFDC1-201ENST00000023939 DNAJC4Q9NNZ3 241 aa11.36□□□□□ -0.59
RTFDC1-201ENST00000023939 TMEM167BQ9NRX6 74 aa11.36□□□□□ -0.59
RTFDC1-201ENST00000023939 C1RLQ9NZP8 487 aa11.36□□□□□ -0.59
RTFDC1-201ENST00000023939 LRBAP50851 2863 aa11.36□□□□□ -0.59
RTFDC1-201ENST00000023939 IGHV4-30-2A0A087WSY4 118 aa11.35□□□□□ -0.59
RTFDC1-201ENST00000023939 CENPVL3A0A0U1RRI6 287 aa11.35□□□□□ -0.59
RTFDC1-201ENST00000023939 CXorf65A6NEN9 183 aa11.35□□□□□ -0.59
RTFDC1-201ENST00000023939 NPIPB5A8MRT5 1133 aa11.35□□□□□ -0.59
RTFDC1-201ENST00000023939 TMEM11P17152 192 aa11.35□□□□□ -0.59
RTFDC1-201ENST00000023939 CX3CL1P78423 397 aa11.35□□□□□ -0.59
RTFDC1-201ENST00000023939 SMIM7Q9BQ49 75 aa11.35□□□□□ -0.59
RTFDC1-201ENST00000023939 WNT10AQ9GZT5 417 aa11.35□□□□□ -0.59
RTFDC1-201ENST00000023939 PARLQ9H300 379 aa11.35□□□□□ -0.59
RTFDC1-201ENST00000023939 TNFRSF19Q9NS68 423 aa11.35□□□□□ -0.59
RTFDC1-201ENST00000023939 TMEM242Q9NWH2 141 aa11.35□□□□□ -0.59
RTFDC1-201ENST00000023939 MT-ND4LP03901 98 aa11.35□□□□□ -0.59
RTFDC1-201ENST00000023939 C8orf88P0DMB2 117 aa11.35□□□□□ -0.59
RTFDC1-201ENST00000023939 BPIFB3P59826 476 aa11.35□□□□□ -0.59
RTFDC1-201ENST00000023939 TMEM241Q24JQ0 296 aa11.35□□□□□ -0.59
RTFDC1-201ENST00000023939 OR4X1Q8NH49 305 aa11.35□□□□□ -0.59
RTFDC1-201ENST00000023939 YPEL4Q96NS1 127 aa11.35□□□□□ -0.59
RTFDC1-201ENST00000023939 NAV3Q8IVL0 2385 aa11.34□□□□□ -0.59
RTFDC1-201ENST00000023939 PLXNB1O43157 2135 aa11.34□□□□□ -0.59
RTFDC1-201ENST00000023939 DCHS2Q6V1P9 2916 aa11.34□□□□□ -0.59
RTFDC1-201ENST00000023939 ELOA3CA0A087WX78 387 aaPredicted RBP11.34□□□□□ -0.59
RTFDC1-201ENST00000023939 LOC105371267A0A1B0GV96 52 aa11.34□□□□□ -0.59
RTFDC1-201ENST00000023939 FOLR2P14207 255 aa11.34□□□□□ -0.59
RTFDC1-201ENST00000023939 ATF4P18848 351 aaPredicted RBP11.34□□□□□ -0.59
RTFDC1-201ENST00000023939 NPPCP23582 126 aa11.34□□□□□ -0.59
RTFDC1-201ENST00000023939 ATP5G3P48201 142 aa11.34□□□□□ -0.59
RTFDC1-201ENST00000023939 PLP1P60201 277 aa11.34□□□□□ -0.59
RTFDC1-201ENST00000023939 ZNF90Q03938 601 aa11.34□□□□□ -0.59
RTFDC1-201ENST00000023939 CST9LP1Q5W188 147 aa11.34□□□□□ -0.59
RTFDC1-201ENST00000023939 C19orf35Q6ZS72 473 aa11.34□□□□□ -0.59
RTFDC1-201ENST00000023939 TTC9CQ8N5M4 171 aa11.34□□□□□ -0.59
RTFDC1-201ENST00000023939 Q8N9W7 124 aa11.34□□□□□ -0.59
RTFDC1-201ENST00000023939 ARPC1AQ92747 370 aa11.34□□□□□ -0.59
RTFDC1-201ENST00000023939 ZNF503Q96F45 646 aa11.34□□□□□ -0.59
RTFDC1-201ENST00000023939 DOK5Q9P104 306 aa11.34□□□□□ -0.59
RTFDC1-201ENST00000023939 PRELID1Q9Y255 219 aa11.34□□□□□ -0.59
RTFDC1-201ENST00000023939 USP9XQ93008 2570 aaPredicted RBP11.33□□□□□ -0.6
RTFDC1-201ENST00000023939 IGHV1-69DA0A0B4J2H0 117 aa11.33□□□□□ -0.6
RTFDC1-201ENST00000023939 COX7A2P2O60397 106 aa11.33□□□□□ -0.6
RTFDC1-201ENST00000023939 IGHV1-69P01742 117 aa11.33□□□□□ -0.6
RTFDC1-201ENST00000023939 IGHV3-48P01763 117 aa11.33□□□□□ -0.6
RTFDC1-201ENST00000023939 HLA-DRB1P01911 266 aa11.33□□□□□ -0.6
RTFDC1-201ENST00000023939 APELAP0DMC3 54 aa11.33□□□□□ -0.6
RTFDC1-201ENST00000023939 UBE2G2P60604 165 aa11.33□□□□□ -0.6
RTFDC1-201ENST00000023939 RNF212Q495C1 297 aa11.33□□□□□ -0.6
RTFDC1-201ENST00000023939 RUSC1-AS1Q66K80 236 aa11.33□□□□□ -0.6
RTFDC1-201ENST00000023939 HIST1H2BAQ96A08 127 aa11.33□□□□□ -0.6
RTFDC1-201ENST00000023939 C11orf52Q96A22 123 aa11.33□□□□□ -0.6
RTFDC1-201ENST00000023939 RPUSD4Q96CM3 377 aaKnown RBP11.33□□□□□ -0.6
RTFDC1-201ENST00000023939 PERPQ96FX8 193 aa11.33□□□□□ -0.6
RTFDC1-201ENST00000023939 FAM167A-AS1Q96KT0 104 aa11.33□□□□□ -0.6
RTFDC1-201ENST00000023939 YTHDF2Q9Y5A9 579 aaKnown RBP11.33□□□□□ -0.6
RTFDC1-201ENST00000023939 NCBP2LA6PVI3 153 aaKnown RBP11.32□□□□□ -0.6
RTFDC1-201ENST00000023939 K7EIM0 57 aa11.32□□□□□ -0.6
RTFDC1-201ENST00000023939 OR2C1O95371 312 aa11.32□□□□□ -0.6
RTFDC1-201ENST00000023939 SLC25A16P16260 332 aa11.32□□□□□ -0.6
RTFDC1-201ENST00000023939 ASPHD1Q5U4P2 390 aa11.32□□□□□ -0.6
RTFDC1-201ENST00000023939 C10orf113Q5VZT2 155 aa11.32□□□□□ -0.6
RTFDC1-201ENST00000023939 PATE2Q6UY27 113 aa11.32□□□□□ -0.6
RTFDC1-201ENST00000023939 CTDSP1Q9GZU7 261 aa11.32□□□□□ -0.6
RTFDC1-201ENST00000023939 MSMBP08118 114 aa11.32□□□□□ -0.6
RTFDC1-201ENST00000023939 IGLC1P0CG04 106 aa11.32□□□□□ -0.6
RTFDC1-201ENST00000023939 KLK9Q2XQG4 91 aa11.32□□□□□ -0.6
RTFDC1-201ENST00000023939 FAM120AOSQ5T036 256 aa11.32□□□□□ -0.6
RTFDC1-201ENST00000023939 ZNF48Q96MX3 618 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms