RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Sf3b5Q923D4 86 aaKnown RBP12.22□□□□□ -0.45
Col3a1-201ENSMUST00000087883 2900055J20RikQ9D6G3 140 aa12.22□□□□□ -0.45
Col3a1-201ENSMUST00000087883 Gm14408E9Q6B9 136 aa12.21□□□□□ -0.45
Col3a1-201ENSMUST00000087883 Hoxa6P09092 232 aa12.21□□□□□ -0.45
Col3a1-201ENSMUST00000087883 RpeQ8VEE0 228 aa12.21□□□□□ -0.45
Col3a1-201ENSMUST00000087883 Espl1P60330 2118 aa12.21□□□□□ -0.45
Col3a1-201ENSMUST00000087883 Col22a1E9Q7P1 1613 aa12.21□□□□□ -0.45
Col3a1-201ENSMUST00000087883 Gm6993A0A1W2P738 69 aa12.21□□□□□ -0.45
Col3a1-201ENSMUST00000087883 Gm20696H3BJN7 74 aa12.21□□□□□ -0.45
Col3a1-201ENSMUST00000087883 Gm20830J3KML6 227 aa12.21□□□□□ -0.45
Col3a1-201ENSMUST00000087883 Tnfaip6O08859 275 aa12.21□□□□□ -0.45
Col3a1-201ENSMUST00000087883 Lrfn4Q80XU8 636 aa12.21□□□□□ -0.45
Col3a1-201ENSMUST00000087883 Rab37Q9JKM7 223 aa12.21□□□□□ -0.45
Col3a1-201ENSMUST00000087883 BlnkQ9QUN3 457 aa12.21□□□□□ -0.45
Col3a1-201ENSMUST00000087883 Gabrg3P27681 467 aa12.21□□□□□ -0.45
Col3a1-201ENSMUST00000087883 Lrrc3bQ8VCH9 259 aa12.21□□□□□ -0.45
Col3a1-201ENSMUST00000087883 Wfdc18P62810 74 aa12.21□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Bsph2Q0Q236 131 aa12.21□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Zfp92Q62396 488 aa12.21□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Olfr1204Q7TR10 309 aa12.21□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Olfr1026Q7TR90 307 aa12.21□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Olfr823Q7TRH2 315 aa12.21□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Sirt7Q8BKJ9 402 aa12.21□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Cbln4Q8BME9 198 aa12.21□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Tmem97Q8VD00 176 aa12.21□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Ndufaf3Q9JKL4 185 aa12.21□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Gpr34Q9R1K6 375 aa12.21□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Fcgr4A0A0B4J1G0 249 aa12.21□□□□□ -0.46
Col3a1-201ENSMUST00000087883 C1ql1O88992 258 aa12.21□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Tff1Q08423 87 aa12.21□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Zfp874bQ7M6X2 447 aa12.21□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Depp1Q8K2F3 205 aa12.21□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Lrrc26Q91W20 331 aa12.21□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Dph7Q9CYU6 477 aa12.21□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Cxcl2P10889 100 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Hoxb1P17919 297 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Rnf122Q8BP31 155 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Defb8Q91V82 60 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Ca15Q99N23 324 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Atg101Q9D8Z6 218 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Josd1Q9DBJ6 202 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Esp23A8R0V5 104 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Vmn1r149E9PWL6 307 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Vmn1r101E9Q365 307 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Vmn1r158G3UY92 307 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Trappc1Q5NCF2 145 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Coq2Q66JT7 374 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Prrg4Q8BGN6 226 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Tmem108Q8BHE4 574 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Vstm2aQ8R0A6 236 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Cadm4Q8R464 388 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Olfr1404Q8VGE1 313 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Znf106O88466 1888 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Gm17430F6RSK3 157 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 GferP56213 198 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Smad4P97471 551 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Btf3Q64152 204 aaKnown RBP12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Rbm14Q8C2Q3 669 aaKnown RBP12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Sulf2Q8CFG0 875 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Scnm1Q8K136 229 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 MrgprgQ91ZB5 289 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Dcbld1Q9D4J3 503 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Ap5s1Q9D742 170 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Mmp16Q9WTR0 607 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Aifm1Q9Z0X1 612 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Olfr147Q60886 317 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Olfr1009Q8VFK1 314 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Olfr1038Q8VGS1 319 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Kcne4Q9WTW3 170 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Ltbp1Q8CG19 1712 aa12.2□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Gm9376G3UW68 176 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Smim9Q3V0X1 137 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Ubald1Q6P3B2 176 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Mtch2Q791V5 303 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Olfr876Q7TRE4 310 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Slamf7Q8BHK6 333 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Rgp1Q8BHT7 391 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Rln3Q8CHK2 141 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Gp2Q9D733 531 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Q9DAL9 119 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Foxj2Q9ES18 565 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Fscn3Q9QXW4 498 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Serf2P84102 59 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 NotoQ5TIS6 240 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Dmrta1Q8CFG4 490 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Trpm6Q8CIR4 2028 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Olfr1328B1ARV2 313 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 LalbaP29752 143 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Olfr1535Q7TQU0 326 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 SowahbQ8BZW2 760 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Olfr1441Q8VFV3 318 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Ccdc198Q9CPZ1 294 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Lamtor1Q9CQ22 161 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Q9DAA3 117 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 HcstQ9QUJ0 79 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Arfgef1G3X9K3 1846 aaKnown RBP12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 P06323 132 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Ccl4P14097 92 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Vax1Q2NKI2 338 aa12.19□□□□□ -0.46
Col3a1-201ENSMUST00000087883 Gm1673Q3UR78 90 aa12.19□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 63.9 ms