RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 C9JCJ5 164 aa13.49□□□□□ -0.25
HNRNPU-228ENST00000640306 IRF2P14316 349 aa13.49□□□□□ -0.25
HNRNPU-228ENST00000640306 CHRNB4P30926 498 aa13.49□□□□□ -0.25
HNRNPU-228ENST00000640306 TDGF1P3P51864 188 aa13.49□□□□□ -0.25
HNRNPU-228ENST00000640306 CCL8P80075 99 aa13.49□□□□□ -0.25
HNRNPU-228ENST00000640306 TNFAIP6P98066 277 aaPredicted RBP13.49□□□□□ -0.25
HNRNPU-228ENST00000640306 TIGITQ495A1 244 aa13.49□□□□□ -0.25
HNRNPU-228ENST00000640306 LHBP01229 141 aa13.49□□□□□ -0.25
HNRNPU-228ENST00000640306 SAA1P0DJI8 122 aaPredicted RBP13.49□□□□□ -0.25
HNRNPU-228ENST00000640306 AREGP15514 252 aa13.49□□□□□ -0.25
HNRNPU-228ENST00000640306 SGK494Q96LW2 274 aa13.49□□□□□ -0.25
HNRNPU-228ENST00000640306 ASCL3Q9NQ33 180 aa13.49□□□□□ -0.25
HNRNPU-228ENST00000640306 DSCAML1Q8TD84 2053 aa13.49□□□□□ -0.25
HNRNPU-228ENST00000640306 E7EUB6 86 aa13.48□□□□□ -0.25
HNRNPU-228ENST00000640306 PLAUP00749 431 aa13.48□□□□□ -0.25
HNRNPU-228ENST00000640306 AMTP48728 403 aa13.48□□□□□ -0.25
HNRNPU-228ENST00000640306 C10orf55Q5SWW7 151 aa13.48□□□□□ -0.25
HNRNPU-228ENST00000640306 FAM19A2Q8N3H0 131 aa13.48□□□□□ -0.25
HNRNPU-228ENST00000640306 SIGLECL1Q8N7X8 197 aa13.48□□□□□ -0.25
HNRNPU-228ENST00000640306 FAM168AQ92567 244 aa13.48□□□□□ -0.25
HNRNPU-228ENST00000640306 VAMP8Q9BV40 100 aa13.48□□□□□ -0.25
HNRNPU-228ENST00000640306 TECRQ9NZ01 308 aaKnown RBP13.48□□□□□ -0.25
HNRNPU-228ENST00000640306 RNF7Q9UBF6 113 aa13.48□□□□□ -0.25
HNRNPU-228ENST00000640306 TRAV34A0A0B4J273 112 aa13.48□□□□□ -0.25
HNRNPU-228ENST00000640306 UPK2O00526 184 aa13.48□□□□□ -0.25
HNRNPU-228ENST00000640306 PYYP10082 97 aa13.48□□□□□ -0.25
HNRNPU-228ENST00000640306 PAFAH1B2P68402 229 aa13.48□□□□□ -0.25
HNRNPU-228ENST00000640306 ASCL5Q7RTU5 278 aa13.48□□□□□ -0.25
HNRNPU-228ENST00000640306 GAFA1Q96PS6 74 aa13.48□□□□□ -0.25
HNRNPU-228ENST00000640306 PRNDQ9UKY0 176 aa13.48□□□□□ -0.25
HNRNPU-228ENST00000640306 RAB4AP20338 218 aa13.47□□□□□ -0.25
HNRNPU-228ENST00000640306 SRIP30626 198 aa13.47□□□□□ -0.25
HNRNPU-228ENST00000640306 NBL1P41271 181 aa13.47□□□□□ -0.25
HNRNPU-228ENST00000640306 RANP62826 216 aaKnown RBP13.47□□□□□ -0.25
HNRNPU-228ENST00000640306 PRCDQ00LT1 54 aa13.47□□□□□ -0.25
HNRNPU-228ENST00000640306 FAM27E3Q08E93 113 aa13.47□□□□□ -0.25
HNRNPU-228ENST00000640306 TUBG2Q9NRH3 451 aa13.47□□□□□ -0.25
HNRNPU-228ENST00000640306 TMEM167BQ9NRX6 74 aa13.47□□□□□ -0.25
HNRNPU-228ENST00000640306 TBL2Q9Y4P3 447 aaKnown RBP13.47□□□□□ -0.25
HNRNPU-228ENST00000640306 ZNF253O75346 499 aa13.47□□□□□ -0.25
HNRNPU-228ENST00000640306 CCL3L1P16619 93 aa13.47□□□□□ -0.25
HNRNPU-228ENST00000640306 IBA57Q5T440 356 aaKnown RBP13.47□□□□□ -0.25
HNRNPU-228ENST00000640306 PRR27Q6MZM9 219 aa13.47□□□□□ -0.25
HNRNPU-228ENST00000640306 ZNF439Q8NDP4 499 aa13.47□□□□□ -0.25
HNRNPU-228ENST00000640306 A0A1B0GWJ7 208 aa13.46□□□□□ -0.25
HNRNPU-228ENST00000640306 IGHV1-46P01743 117 aa13.46□□□□□ -0.25
HNRNPU-228ENST00000640306 GLRXP35754 106 aa13.46□□□□□ -0.25
HNRNPU-228ENST00000640306 CFHR2P36980 270 aa13.46□□□□□ -0.25
HNRNPU-228ENST00000640306 MRPL20Q9BYC9 149 aaKnown RBP13.46□□□□□ -0.25
HNRNPU-228ENST00000640306 RAI1Q7Z5J4 1906 aaPredicted RBP13.46□□□□□ -0.25
HNRNPU-228ENST00000640306 NTF3P20783 257 aa13.46□□□□□ -0.25
HNRNPU-228ENST00000640306 UBE2L3P68036 154 aaKnown RBP13.46□□□□□ -0.25
HNRNPU-228ENST00000640306 RTL8BQ17RB0 113 aa13.46□□□□□ -0.25
HNRNPU-228ENST00000640306 CORO2AQ92828 525 aa13.46□□□□□ -0.25
HNRNPU-228ENST00000640306 DIAPH2-AS1Q14236 149 aa13.46□□□□□ -0.26
HNRNPU-228ENST00000640306 HARBI1Q96MB7 349 aa13.46□□□□□ -0.26
HNRNPU-228ENST00000640306 APELAP0DMC3 54 aa13.45□□□□□ -0.26
HNRNPU-228ENST00000640306 RNASE2P10153 161 aaKnown RBP13.45□□□□□ -0.26
HNRNPU-228ENST00000640306 COMPP49747 757 aaPredicted RBP13.45□□□□□ -0.26
HNRNPU-228ENST00000640306 CX3CL1P78423 397 aa13.45□□□□□ -0.26
HNRNPU-228ENST00000640306 TMEM183BQ1AE95 376 aa13.45□□□□□ -0.26
HNRNPU-228ENST00000640306 STUMQ69YW2 141 aa13.45□□□□□ -0.26
HNRNPU-228ENST00000640306 TEX43Q6ZNM6 134 aa13.45□□□□□ -0.26
HNRNPU-228ENST00000640306 TMEM136Q6ZRR5 245 aa13.45□□□□□ -0.26
HNRNPU-228ENST00000640306 ATOH7Q8N100 152 aa13.45□□□□□ -0.26
HNRNPU-228ENST00000640306 PPIAL4AQ9Y536 164 aa13.45□□□□□ -0.26
HNRNPU-228ENST00000640306 TANC2Q9HCD6 1990 aa13.45□□□□□ -0.26
HNRNPU-228ENST00000640306 IGLV2-8P01709 118 aa13.45□□□□□ -0.26
HNRNPU-228ENST00000640306 REG1AP05451 166 aa13.45□□□□□ -0.26
HNRNPU-228ENST00000640306 TFPI2P48307 235 aa13.45□□□□□ -0.26
HNRNPU-228ENST00000640306 DIRC3C9JPN6 131 aa13.44□□□□□ -0.26
HNRNPU-228ENST00000640306 GPX1P07203 203 aa13.44□□□□□ -0.26
HNRNPU-228ENST00000640306 SLC25A33Q9BSK2 321 aa13.44□□□□□ -0.26
HNRNPU-228ENST00000640306 SFXN3Q9BWM7 321 aa13.44□□□□□ -0.26
HNRNPU-228ENST00000640306 GNB1LQ9BYB4 327 aa13.44□□□□□ -0.26
HNRNPU-228ENST00000640306 COMMD5Q9GZQ3 224 aa13.44□□□□□ -0.26
HNRNPU-228ENST00000640306 NRN1Q9NPD7 142 aa13.44□□□□□ -0.26
HNRNPU-228ENST00000640306 ZNF355PQ9NSJ1 428 aa13.44□□□□□ -0.26
HNRNPU-228ENST00000640306 SLC25A10Q9UBX3 287 aaPredicted RBP13.44□□□□□ -0.26
HNRNPU-228ENST00000640306 DYSFO75923 2080 aa13.44□□□□□ -0.26
HNRNPU-228ENST00000640306 ADTRPQ96IZ2 230 aa13.44□□□□□ -0.26
HNRNPU-228ENST00000640306 WNT10AQ9GZT5 417 aa13.44□□□□□ -0.26
HNRNPU-228ENST00000640306 RPUSD1Q9UJJ7 312 aaKnown RBP13.44□□□□□ -0.26
HNRNPU-228ENST00000640306 RPH3ALQ9UNE2 315 aa13.44□□□□□ -0.26
HNRNPU-228ENST00000640306 BMPR1BO00238 502 aa13.43□□□□□ -0.26
HNRNPU-228ENST00000640306 C8orf88P0DMB2 117 aa13.43□□□□□ -0.26
HNRNPU-228ENST00000640306 BRS3P32247 399 aa13.43□□□□□ -0.26
HNRNPU-228ENST00000640306 PRB3Q04118 309 aaPredicted RBP13.43□□□□□ -0.26
HNRNPU-228ENST00000640306 TIMM23BQ5SRD1 257 aa13.43□□□□□ -0.26
HNRNPU-228ENST00000640306 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.43□□□□□ -0.26
HNRNPU-228ENST00000640306 MIEN1Q9BRT3 115 aa13.43□□□□□ -0.26
HNRNPU-228ENST00000640306 FAM215AQ9Y5M1 114 aa13.43□□□□□ -0.26
HNRNPU-228ENST00000640306 TM4SF5O14894 197 aa13.43□□□□□ -0.26
HNRNPU-228ENST00000640306 TAS2R45P59539 299 aa13.43□□□□□ -0.26
HNRNPU-228ENST00000640306 SLC25A48Q6ZT89 311 aaKnown RBP13.43□□□□□ -0.26
HNRNPU-228ENST00000640306 CHODLQ9H9P2 273 aa13.43□□□□□ -0.26
HNRNPU-228ENST00000640306 ZNF586Q9NXT0 402 aa13.43□□□□□ -0.26
HNRNPU-228ENST00000640306 CDC42EP3Q9UKI2 254 aa13.43□□□□□ -0.26
HNRNPU-228ENST00000640306 TRAV9-1A0A075B6T8 112 aa13.43□□□□□ -0.26
HNRNPU-228ENST00000640306 A0A1W2PS18 150 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms