RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 C3orf62Q6ZUJ4 267 aa3.26□□□□□ -1.89
RFC1-217ENST00000639695 OR51T1Q8NGJ9 327 aa3.26□□□□□ -1.89
RFC1-217ENST00000639695 H1FXQ92522 213 aaKnown RBP3.26□□□□□ -1.89
RFC1-217ENST00000639695 OR8D2Q9GZM6 311 aa3.26□□□□□ -1.89
RFC1-217ENST00000639695 NDUFB11Q9NX14 153 aa3.26□□□□□ -1.89
RFC1-217ENST00000639695 TVP23BQ9NYZ1 205 aa3.26□□□□□ -1.89
RFC1-217ENST00000639695 NEO1Q92859 1461 aa3.26□□□□□ -1.89
RFC1-217ENST00000639695 NYNRINQ9P2P1 1898 aaKnown RBP3.26□□□□□ -1.89
RFC1-217ENST00000639695 TRAV38-1A0A0B4J264 116 aa3.25□□□□□ -1.89
RFC1-217ENST00000639695 J3QRK9 145 aa3.25□□□□□ -1.89
RFC1-217ENST00000639695 SLC22A1O15245 554 aa3.25□□□□□ -1.89
RFC1-217ENST00000639695 LGALS1P09382 135 aaKnown RBP3.25□□□□□ -1.89
RFC1-217ENST00000639695 SMIM17P0DL12 118 aa3.25□□□□□ -1.89
RFC1-217ENST00000639695 CCL5P13501 91 aa3.25□□□□□ -1.89
RFC1-217ENST00000639695 NFYAP23511 347 aaPredicted RBP3.25□□□□□ -1.89
RFC1-217ENST00000639695 RPL28P46779 137 aaKnown RBP3.25□□□□□ -1.89
RFC1-217ENST00000639695 ZNF90Q03938 601 aa3.25□□□□□ -1.89
RFC1-217ENST00000639695 OR13C6PQ8NH95 151 aa3.25□□□□□ -1.89
RFC1-217ENST00000639695 TRABDQ9H4I3 376 aa3.25□□□□□ -1.89
RFC1-217ENST00000639695 KIF13BQ9NQT8 1826 aa3.25□□□□□ -1.89
RFC1-217ENST00000639695 UACAQ9BZF9 1416 aa3.25□□□□□ -1.89
RFC1-217ENST00000639695 ANKRD30AQ9BXX3 1397 aa3.25□□□□□ -1.89
RFC1-217ENST00000639695 DOCK6Q96HP0 2047 aa3.24□□□□□ -1.89
RFC1-217ENST00000639695 FYCO1Q9BQS8 1478 aa3.24□□□□□ -1.89
RFC1-217ENST00000639695 IGKV1D-43A0A0B4J1Z2 117 aa3.24□□□□□ -1.89
RFC1-217ENST00000639695 TRAPPC13A5PLN9 417 aa3.24□□□□□ -1.89
RFC1-217ENST00000639695 H3BQV1 296 aa3.24□□□□□ -1.89
RFC1-217ENST00000639695 PLXNB1O43157 2135 aa3.24□□□□□ -1.89
RFC1-217ENST00000639695 HMGN1P05114 100 aa3.24□□□□□ -1.89
RFC1-217ENST00000639695 FABP1P07148 127 aa3.24□□□□□ -1.89
RFC1-217ENST00000639695 CBR1P16152 277 aa3.24□□□□□ -1.89
RFC1-217ENST00000639695 PHBP35232 272 aa3.24□□□□□ -1.89
RFC1-217ENST00000639695 AKAP14Q86UN6 197 aa3.24□□□□□ -1.89
RFC1-217ENST00000639695 DYNAPQ8N1N2 210 aa3.24□□□□□ -1.89
RFC1-217ENST00000639695 C2orf50Q96LR7 162 aa3.24□□□□□ -1.89
RFC1-217ENST00000639695 HOPXQ9BPY8 73 aaPredicted RBP3.24□□□□□ -1.89
RFC1-217ENST00000639695 CCL26Q9Y258 94 aa3.24□□□□□ -1.89
RFC1-217ENST00000639695 CYSLTR1Q9Y271 337 aa3.24□□□□□ -1.89
RFC1-217ENST00000639695 UTP11Q9Y3A2 253 aaKnown RBP3.24□□□□□ -1.89
RFC1-217ENST00000639695 RB1CC1Q8TDY2 1594 aa3.24□□□□□ -1.89
RFC1-217ENST00000639695 KIF21AQ7Z4S6 1674 aa3.24□□□□□ -1.89
RFC1-217ENST00000639695 SLX4Q8IY92 1834 aa3.23□□□□□ -1.89
RFC1-217ENST00000639695 TCOF1Q13428 1488 aaKnown RBP3.23□□□□□ -1.89
RFC1-217ENST00000639695 TRAV7A0A075B6U4 112 aa3.23□□□□□ -1.89
RFC1-217ENST00000639695 TRAV41A0A0B4J266 112 aa3.23□□□□□ -1.89
RFC1-217ENST00000639695 SDHAF1A6NFY7 115 aa3.23□□□□□ -1.89
RFC1-217ENST00000639695 FNDC10F2Z333 226 aa3.23□□□□□ -1.89
RFC1-217ENST00000639695 S100A4P26447 101 aaKnown RBP3.23□□□□□ -1.89
RFC1-217ENST00000639695 Q6Q795 121 aa3.23□□□□□ -1.89
RFC1-217ENST00000639695 C12orf45Q8N5I9 185 aaPredicted RBP3.23□□□□□ -1.89
RFC1-217ENST00000639695 SLC25A40Q8TBP6 338 aa3.23□□□□□ -1.89
RFC1-217ENST00000639695 RASSF5Q8WWW0 418 aa3.23□□□□□ -1.89
RFC1-217ENST00000639695 C6orf62Q9GZU0 229 aaPredicted RBP3.23□□□□□ -1.89
RFC1-217ENST00000639695 SLC39A9Q9NUM3 307 aa3.23□□□□□ -1.89
RFC1-217ENST00000639695 TP73-AS1Q9UF72 201 aa3.23□□□□□ -1.89
RFC1-217ENST00000639695 MAPKBP1O60336 1514 aa3.23□□□□□ -1.89
RFC1-217ENST00000639695 FAM135AQ9P2D6 1515 aa3.23□□□□□ -1.89
RFC1-217ENST00000639695 IFT140Q96RY7 1462 aa3.22□□□□□ -1.89
RFC1-217ENST00000639695 SDK2Q58EX2 2172 aa3.22□□□□□ -1.89
RFC1-217ENST00000639695 CPSF1Q10570 1443 aaKnown RBP3.22□□□□□ -1.89
RFC1-217ENST00000639695 MUC21A0A0G2JKD1 596 aa3.22□□□□□ -1.89
RFC1-217ENST00000639695 MUC21A0A140T8X8 626 aa3.22□□□□□ -1.89
RFC1-217ENST00000639695 LOC105371267A0A1B0GV96 52 aa3.22□□□□□ -1.89
RFC1-217ENST00000639695 G3V2T6 193 aa3.22□□□□□ -1.89
RFC1-217ENST00000639695 H7C2G1 150 aa3.22□□□□□ -1.89
RFC1-217ENST00000639695 PGRMC1O00264 195 aaKnown RBP3.22□□□□□ -1.89
RFC1-217ENST00000639695 S1PR2O95136 353 aa3.22□□□□□ -1.89
RFC1-217ENST00000639695 PPBPP02775 128 aa3.22□□□□□ -1.89
RFC1-217ENST00000639695 OR4E1P0C645 316 aa3.22□□□□□ -1.89
RFC1-217ENST00000639695 CASP1P29466 404 aa3.22□□□□□ -1.89
RFC1-217ENST00000639695 ERHP84090 104 aaKnown RBP3.22□□□□□ -1.89
RFC1-217ENST00000639695 TNFRSF9Q07011 255 aa3.22□□□□□ -1.89
RFC1-217ENST00000639695 LYRM7Q5U5X0 104 aa3.22□□□□□ -1.89
RFC1-217ENST00000639695 RPP25LQ8N5L8 163 aaKnown RBP3.22□□□□□ -1.89
RFC1-217ENST00000639695 SCGB3A1Q96QR1 104 aa3.22□□□□□ -1.89
RFC1-217ENST00000639695 Q9BRP9 147 aa3.22□□□□□ -1.89
RFC1-217ENST00000639695 TAS2R7Q9NYW3 318 aa3.22□□□□□ -1.89
RFC1-217ENST00000639695 MAP3K1Q13233 1512 aa3.22□□□□□ -1.89
RFC1-217ENST00000639695 HECW1Q76N89 1606 aa3.22□□□□□ -1.89
RFC1-217ENST00000639695 MYO16Q9Y6X6 1858 aa3.22□□□□□ -1.89
RFC1-217ENST00000639695 RTEL1-TNFRSF6BF6WH68 1400 aa3.21□□□□□ -1.9
RFC1-217ENST00000639695 SLIT2O94813 1529 aa3.21□□□□□ -1.9
RFC1-217ENST00000639695 TOP2AP11388 1531 aaKnown RBP3.21□□□□□ -1.9
RFC1-217ENST00000639695 IGHV3-64A0A075B6Q5 118 aa3.21□□□□□ -1.9
RFC1-217ENST00000639695 MIF4GDA9UHW6 222 aaKnown RBP3.21□□□□□ -1.9
RFC1-217ENST00000639695 IFNA14P01570 189 aa3.21□□□□□ -1.9
RFC1-217ENST00000639695 RPS4Y1P22090 263 aaKnown RBP3.21□□□□□ -1.9
RFC1-217ENST00000639695 EVX1P49640 407 aa3.21□□□□□ -1.9
RFC1-217ENST00000639695 EIF2B2P49770 351 aaKnown RBP3.21□□□□□ -1.9
RFC1-217ENST00000639695 TCTAP57738 103 aa3.21□□□□□ -1.9
RFC1-217ENST00000639695 TAS2R41P59536 307 aa3.21□□□□□ -1.9
RFC1-217ENST00000639695 TMEM258P61165 79 aa3.21□□□□□ -1.9
RFC1-217ENST00000639695 GNG3P63215 75 aa3.21□□□□□ -1.9
RFC1-217ENST00000639695 FOXF1Q12946 379 aa3.21□□□□□ -1.9
RFC1-217ENST00000639695 CCDC58Q4VC31 144 aa3.21□□□□□ -1.9
RFC1-217ENST00000639695 IFT20Q8IY31 132 aa3.21□□□□□ -1.9
RFC1-217ENST00000639695 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.21□□□□□ -1.9
RFC1-217ENST00000639695 OR4X2Q8NGF9 303 aa3.21□□□□□ -1.9
RFC1-217ENST00000639695 TEX47Q8TBZ9 253 aa3.21□□□□□ -1.9
RFC1-217ENST00000639695 DNAJC9Q8WXX5 260 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms