RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 FAAHO00519 579 aa0.01□□□□□ -2.41
SRP54-214ENST00000630962 PFDN6O15212 129 aa0.01□□□□□ -2.41
SRP54-214ENST00000630962 C8orf88P0DMB2 117 aa0.01□□□□□ -2.41
SRP54-214ENST00000630962 PSG9Q00887 426 aa0.01□□□□□ -2.41
SRP54-214ENST00000630962 MED21Q13503 144 aa0.01□□□□□ -2.41
SRP54-214ENST00000630962 CIRBPQ14011 172 aaKnown RBP0.01□□□□□ -2.41
SRP54-214ENST00000630962 KHDC3LQ587J8 217 aa0.01□□□□□ -2.41
SRP54-214ENST00000630962 SPINK9Q5DT21 86 aa0.01□□□□□ -2.41
SRP54-214ENST00000630962 C1orf137Q5JT78 98 aa0.01□□□□□ -2.41
SRP54-214ENST00000630962 LPCAT4Q643R3 524 aa0.01□□□□□ -2.41
SRP54-214ENST00000630962 PLEKHG7Q6ZR37 379 aa0.01□□□□□ -2.41
SRP54-214ENST00000630962 MIR17HGQ75NE6 70 aa0.01□□□□□ -2.41
SRP54-214ENST00000630962 COMMD7Q86VX2 200 aa0.01□□□□□ -2.41
SRP54-214ENST00000630962 LRRC25Q8N386 305 aaPredicted RBP0.01□□□□□ -2.41
SRP54-214ENST00000630962 OR13C4Q8NGS5 318 aa0.01□□□□□ -2.41
SRP54-214ENST00000630962 MRPL30Q8TCC3 161 aaKnown RBP0.01□□□□□ -2.41
SRP54-214ENST00000630962 CMTM5Q96DZ9 223 aa0.01□□□□□ -2.41
SRP54-214ENST00000630962 TMEM147Q9BVK8 224 aa0.01□□□□□ -2.41
SRP54-214ENST00000630962 MAP1LC3AQ9H492 121 aa0.01□□□□□ -2.41
SRP54-214ENST00000630962 C3orf18Q9UK00 162 aa0.01□□□□□ -2.41
SRP54-214ENST00000630962 HS3ST2Q9Y278 367 aa0.01□□□□□ -2.41
SRP54-214ENST00000630962 E9PCH4 1651 aa0.01□□□□□ -2.41
SRP54-214ENST00000630962 SNRNP200O75643 2136 aaKnown RBP0.01□□□□□ -2.41
SRP54-214ENST00000630962 A0A0J9YY10 115 aa0□□□□□ -2.41
SRP54-214ENST00000630962 A0A1B0GX78 115 aa0□□□□□ -2.41
SRP54-214ENST00000630962 ZNF736B4DX44 427 aaPredicted RBP0□□□□□ -2.41
SRP54-214ENST00000630962 F5H768 121 aa0□□□□□ -2.41
SRP54-214ENST00000630962 SULT1B1O43704 296 aa0□□□□□ -2.41
SRP54-214ENST00000630962 MCM3APO60318 1980 aa0□□□□□ -2.41
SRP54-214ENST00000630962 ZNF25P17030 456 aaPredicted RBP0□□□□□ -2.41
SRP54-214ENST00000630962 SSR2P43308 183 aa0□□□□□ -2.41
SRP54-214ENST00000630962 EFNA4P52798 201 aa0□□□□□ -2.41
SRP54-214ENST00000630962 CNBPP62633 177 aaKnown RBP0□□□□□ -2.41
SRP54-214ENST00000630962 RSU1Q15404 277 aa0□□□□□ -2.41
SRP54-214ENST00000630962 LINC00575Q6W349 94 aa0□□□□□ -2.41
SRP54-214ENST00000630962 Q6ZS49 121 aa0□□□□□ -2.41
SRP54-214ENST00000630962 FUNDC1Q8IVP5 155 aa0□□□□□ -2.41
SRP54-214ENST00000630962 SYNE1Q8NF91 8797 aaKnown RBP0□□□□□ -2.41
SRP54-214ENST00000630962 WDR61Q9GZS3 305 aaKnown RBP0□□□□□ -2.41
SRP54-214ENST00000630962 XPNPEP1Q9NQW7 623 aa0□□□□□ -2.41
SRP54-214ENST00000630962 CDC42SE1Q9NRR8 79 aa0□□□□□ -2.41
SRP54-214ENST00000630962 DENND4CQ5VZ89 1909 aa-0.01□□□□□ -2.41
SRP54-214ENST00000630962 RALGAPA2Q2PPJ7 1873 aa-0.01□□□□□ -2.41
SRP54-214ENST00000630962 COL1A1P02452 1464 aaPredicted RBP-0.01□□□□□ -2.41
SRP54-214ENST00000630962 TRAV1-1A0A0B4J248 108 aa-0.01□□□□□ -2.41
SRP54-214ENST00000630962 IFNA10P01566 189 aa-0.01□□□□□ -2.41
SRP54-214ENST00000630962 TYMSP04818 313 aa-0.01□□□□□ -2.41
SRP54-214ENST00000630962 REG1AP05451 166 aa-0.01□□□□□ -2.41
SRP54-214ENST00000630962 PSMB6P28072 239 aa-0.01□□□□□ -2.41
SRP54-214ENST00000630962 RPL12P30050 165 aaKnown RBP-0.01□□□□□ -2.41
SRP54-214ENST00000630962 MAP2K4P45985 399 aa-0.01□□□□□ -2.41
SRP54-214ENST00000630962 KISS1Q15726 138 aa-0.01□□□□□ -2.41
SRP54-214ENST00000630962 PLPP5Q8NEB5 264 aa-0.01□□□□□ -2.41
SRP54-214ENST00000630962 OR5A1Q8NGJ0 315 aa-0.01□□□□□ -2.41
SRP54-214ENST00000630962 TEX47Q8TBZ9 253 aa-0.01□□□□□ -2.41
SRP54-214ENST00000630962 SPRR2GQ9BYE4 73 aa-0.01□□□□□ -2.41
SRP54-214ENST00000630962 PIK3R4Q99570 1358 aa-0.02□□□□□ -2.41
SRP54-214ENST00000630962 CEP192Q8TEP8 1941 aa-0.02□□□□□ -2.41
SRP54-214ENST00000630962 INMT-MINDY4F8WBC2 141 aa-0.02□□□□□ -2.41
SRP54-214ENST00000630962 LYZL6O75951 148 aa-0.02□□□□□ -2.41
SRP54-214ENST00000630962 CRYGAP11844 174 aa-0.02□□□□□ -2.41
SRP54-214ENST00000630962 FAM74A1Q5RGS3 127 aa-0.02□□□□□ -2.41
SRP54-214ENST00000630962 CLVS2Q5SYC1 327 aa-0.02□□□□□ -2.41
SRP54-214ENST00000630962 TEX261Q6UWH6 196 aa-0.02□□□□□ -2.41
SRP54-214ENST00000630962 OR10J5Q8NHC4 309 aa-0.02□□□□□ -2.41
SRP54-214ENST00000630962 PIGXQ8TBF5 258 aa-0.02□□□□□ -2.41
SRP54-214ENST00000630962 TSKUQ8WUA8 353 aa-0.02□□□□□ -2.41
SRP54-214ENST00000630962 C7orf50Q9BRJ6 194 aaKnown RBP-0.02□□□□□ -2.41
SRP54-214ENST00000630962 SLC35A3Q9Y2D2 325 aa-0.02□□□□□ -2.41
SRP54-214ENST00000630962 U3KQ87 197 aa-0.02□□□□□ -2.41
SRP54-214ENST00000630962 KIF13BQ9NQT8 1826 aa-0.02□□□□□ -2.41
SRP54-214ENST00000630962 CCDC88AQ3V6T2 1871 aa-0.03□□□□□ -2.41
SRP54-214ENST00000630962 FABP12A6NFH5 140 aa-0.03□□□□□ -2.41
SRP54-214ENST00000630962 IGLV3-1P01715 115 aa-0.03□□□□□ -2.41
SRP54-214ENST00000630962 SPINK7P58062 85 aa-0.03□□□□□ -2.41
SRP54-214ENST00000630962 GUK1Q16774 197 aa-0.03□□□□□ -2.41
SRP54-214ENST00000630962 OGFRL1Q5TC84 451 aaPredicted RBP-0.03□□□□□ -2.41
SRP54-214ENST00000630962 C1orf195Q5TG92 126 aa-0.03□□□□□ -2.41
SRP54-214ENST00000630962 LPCAT3Q6P1A2 487 aa-0.03□□□□□ -2.41
SRP54-214ENST00000630962 LRRN1Q6UXK5 716 aa-0.03□□□□□ -2.41
SRP54-214ENST00000630962 LINC00322Q6ZN03 302 aaPredicted RBP-0.03□□□□□ -2.41
SRP54-214ENST00000630962 EXOC3-AS1Q8N2X6 119 aa-0.03□□□□□ -2.41
SRP54-214ENST00000630962 C3orf56Q8N813 242 aa-0.03□□□□□ -2.41
SRP54-214ENST00000630962 OR11H6Q8NGC7 330 aa-0.03□□□□□ -2.41
SRP54-214ENST00000630962 PLEKHJ1Q9NW61 149 aa-0.03□□□□□ -2.41
SRP54-214ENST00000630962 TMEM14CQ9P0S9 112 aa-0.03□□□□□ -2.41
SRP54-214ENST00000630962 ALPK3Q96L96 1907 aa-0.04□□□□□ -2.42
SRP54-214ENST00000630962 CCDC160A6NGH7 325 aa-0.04□□□□□ -2.42
SRP54-214ENST00000630962 OR2T8A6NH00 312 aa-0.04□□□□□ -2.42
SRP54-214ENST00000630962 GOLGA8KD6RF30 607 aa-0.04□□□□□ -2.42
SRP54-214ENST00000630962 HOXA6P31267 233 aa-0.04□□□□□ -2.42
SRP54-214ENST00000630962 RAB5BP61020 215 aa-0.04□□□□□ -2.42
SRP54-214ENST00000630962 NAA20P61599 178 aa-0.04□□□□□ -2.42
SRP54-214ENST00000630962 LCA10Q71F78 164 aa-0.04□□□□□ -2.42
SRP54-214ENST00000630962 BPIFA4PQ86YQ2 179 aa-0.04□□□□□ -2.42
SRP54-214ENST00000630962 FAM9CQ8IZT9 166 aa-0.04□□□□□ -2.42
SRP54-214ENST00000630962 HIST3H2BBQ8N257 126 aa-0.04□□□□□ -2.42
SRP54-214ENST00000630962 SIGLECL1Q8N7X8 197 aa-0.04□□□□□ -2.42
SRP54-214ENST00000630962 DNAJB3Q8WWF6 145 aa-0.04□□□□□ -2.42
SRP54-214ENST00000630962 SLC39A9Q9NUM3 307 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms