RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 TIMM9Q9Y5J7 89 aa1.91□□□□□ -2.1
LSM6P2-201ENST00000552208 V9GYQ6 96 aa1.91□□□□□ -2.1
LSM6P2-201ENST00000552208 SDK2Q58EX2 2172 aa1.91□□□□□ -2.1
LSM6P2-201ENST00000552208 SLX4Q8IY92 1834 aa1.9□□□□□ -2.11
LSM6P2-201ENST00000552208 TMSB15BA0A087X1C1 80 aa1.9□□□□□ -2.11
LSM6P2-201ENST00000552208 CLDN25C9JDP6 229 aa1.9□□□□□ -2.11
LSM6P2-201ENST00000552208 MFSD11O43934 449 aa1.9□□□□□ -2.11
LSM6P2-201ENST00000552208 CIAO1O76071 339 aa1.9□□□□□ -2.11
LSM6P2-201ENST00000552208 PPBPP02775 128 aa1.9□□□□□ -2.11
LSM6P2-201ENST00000552208 CLPSP04118 112 aa1.9□□□□□ -2.11
LSM6P2-201ENST00000552208 RPSAP08865 295 aaKnown RBP1.9□□□□□ -2.11
LSM6P2-201ENST00000552208 RPS4Y1P22090 263 aaKnown RBP1.9□□□□□ -2.11
LSM6P2-201ENST00000552208 LINC01554Q52M75 96 aa1.9□□□□□ -2.11
LSM6P2-201ENST00000552208 FAM27BQ5VT28 67 aa1.9□□□□□ -2.11
LSM6P2-201ENST00000552208 TRIQKQ629K1 86 aa1.9□□□□□ -2.11
LSM6P2-201ENST00000552208 LCA10Q71F78 164 aa1.9□□□□□ -2.11
LSM6P2-201ENST00000552208 SH3BGRL3Q9H299 93 aa1.9□□□□□ -2.11
LSM6P2-201ENST00000552208 TMEM133Q9H2Q1 129 aa1.9□□□□□ -2.11
LSM6P2-201ENST00000552208 TOPBP1Q92547 1522 aa1.9□□□□□ -2.11
LSM6P2-201ENST00000552208 SCAF11Q99590 1463 aaKnown RBP1.89□□□□□ -2.11
LSM6P2-201ENST00000552208 MYO16Q9Y6X6 1858 aa1.89□□□□□ -2.11
LSM6P2-201ENST00000552208 A0A0G2JQZ4 141 aa1.89□□□□□ -2.11
LSM6P2-201ENST00000552208 TRBV10-2A0A0K0K1G8 114 aa1.89□□□□□ -2.11
LSM6P2-201ENST00000552208 A0A1B0GVG6 124 aa1.89□□□□□ -2.11
LSM6P2-201ENST00000552208 J3QRK9 145 aa1.89□□□□□ -2.11
LSM6P2-201ENST00000552208 SLC22A1O15245 554 aa1.89□□□□□ -2.11
LSM6P2-201ENST00000552208 PLXNB1O43157 2135 aa1.89□□□□□ -2.11
LSM6P2-201ENST00000552208 NFYAP23511 347 aaPredicted RBP1.89□□□□□ -2.11
LSM6P2-201ENST00000552208 PIGPP57054 158 aa1.89□□□□□ -2.11
LSM6P2-201ENST00000552208 NCALDP61601 193 aa1.89□□□□□ -2.11
LSM6P2-201ENST00000552208 ZNF181Q2M3W8 571 aa1.89□□□□□ -2.11
LSM6P2-201ENST00000552208 MIR17HGQ75NE6 70 aa1.89□□□□□ -2.11
LSM6P2-201ENST00000552208 EXOC3-AS1Q8N2X6 119 aa1.89□□□□□ -2.11
LSM6P2-201ENST00000552208 OR13C6PQ8NH95 151 aa1.89□□□□□ -2.11
LSM6P2-201ENST00000552208 MRPS24Q96EL2 167 aaKnown RBP1.89□□□□□ -2.11
LSM6P2-201ENST00000552208 SCGB3A1Q96QR1 104 aa1.89□□□□□ -2.11
LSM6P2-201ENST00000552208 PCBD2Q9H0N5 130 aa1.89□□□□□ -2.11
LSM6P2-201ENST00000552208 CENPHQ9H3R5 247 aa1.89□□□□□ -2.11
LSM6P2-201ENST00000552208 LYRM2Q9NU23 88 aaPredicted RBP1.89□□□□□ -2.11
LSM6P2-201ENST00000552208 NDUFB11Q9NX14 153 aa1.89□□□□□ -2.11
LSM6P2-201ENST00000552208 MED29Q9NX70 200 aa1.89□□□□□ -2.11
LSM6P2-201ENST00000552208 ERGIC3Q9Y282 383 aa1.89□□□□□ -2.11
LSM6P2-201ENST00000552208 AMMECR1Q9Y4X0 333 aaPredicted RBP1.89□□□□□ -2.11
LSM6P2-201ENST00000552208 FMN1Q68DA7 1419 aa1.89□□□□□ -2.11
LSM6P2-201ENST00000552208 ADAMTS7Q9UKP4 1686 aa1.89□□□□□ -2.11
LSM6P2-201ENST00000552208 KDM5BQ9UGL1 1544 aa1.88□□□□□ -2.11
LSM6P2-201ENST00000552208 IGKV1-9A0A0C4DH69 117 aa1.88□□□□□ -2.11
LSM6P2-201ENST00000552208 A0A0D9SEW6 157 aa1.88□□□□□ -2.11
LSM6P2-201ENST00000552208 OR51F1A6NGY5 319 aa1.88□□□□□ -2.11
LSM6P2-201ENST00000552208 RFPL4AA6NLU0 287 aa1.88□□□□□ -2.11
LSM6P2-201ENST00000552208 FNDC10F2Z333 226 aa1.88□□□□□ -2.11
LSM6P2-201ENST00000552208 RFPL4AL1F8VTS6 287 aa1.88□□□□□ -2.11
LSM6P2-201ENST00000552208 IGKV4-1P06312 121 aa1.88□□□□□ -2.11
LSM6P2-201ENST00000552208 CBR1P16152 277 aa1.88□□□□□ -2.11
LSM6P2-201ENST00000552208 CASP1P29466 404 aa1.88□□□□□ -2.11
LSM6P2-201ENST00000552208 FXYD2P54710 66 aa1.88□□□□□ -2.11
LSM6P2-201ENST00000552208 KRTAP10-1P60331 282 aa1.88□□□□□ -2.11
LSM6P2-201ENST00000552208 GNG5P63218 68 aa1.88□□□□□ -2.11
LSM6P2-201ENST00000552208 C3orf33Q6P1S2 294 aa1.88□□□□□ -2.11
LSM6P2-201ENST00000552208 Q6ZTI0 123 aa1.88□□□□□ -2.11
LSM6P2-201ENST00000552208 KTN1-AS1Q86SY8 53 aa1.88□□□□□ -2.11
LSM6P2-201ENST00000552208 CLVS1Q8IUQ0 354 aaPredicted RBP1.88□□□□□ -2.11
LSM6P2-201ENST00000552208 ADAT3Q96EY9 351 aaPredicted RBP1.88□□□□□ -2.11
LSM6P2-201ENST00000552208 BIN3Q9NQY0 253 aa1.88□□□□□ -2.11
LSM6P2-201ENST00000552208 LTBP2Q14767 1821 aa1.88□□□□□ -2.11
LSM6P2-201ENST00000552208 CUL9Q8IWT3 2517 aa1.88□□□□□ -2.11
LSM6P2-201ENST00000552208 COL4A2P08572 1712 aa1.88□□□□□ -2.11
LSM6P2-201ENST00000552208 DOCK5Q9H7D0 1870 aa1.88□□□□□ -2.11
LSM6P2-201ENST00000552208 SCN9AQ15858 1988 aa1.87□□□□□ -2.11
LSM6P2-201ENST00000552208 ZNF705FA8MVS1 300 aaPredicted RBP1.87□□□□□ -2.11
LSM6P2-201ENST00000552208 LY6LH3BQJ8 138 aa1.87□□□□□ -2.11
LSM6P2-201ENST00000552208 SYNMO15061 1565 aa1.87□□□□□ -2.11
LSM6P2-201ENST00000552208 SERPINB1P30740 379 aa1.87□□□□□ -2.11
LSM6P2-201ENST00000552208 PHBP35232 272 aa1.87□□□□□ -2.11
LSM6P2-201ENST00000552208 HINT1P49773 126 aaPredicted RBP1.87□□□□□ -2.11
LSM6P2-201ENST00000552208 RHOBP62745 196 aa1.87□□□□□ -2.11
LSM6P2-201ENST00000552208 GRINAQ7Z429 371 aa1.87□□□□□ -2.11
LSM6P2-201ENST00000552208 BPIFA4PQ86YQ2 179 aa1.87□□□□□ -2.11
LSM6P2-201ENST00000552208 DOCK3Q8IZD9 2030 aa1.87□□□□□ -2.11
LSM6P2-201ENST00000552208 OR4X2Q8NGF9 303 aa1.87□□□□□ -2.11
LSM6P2-201ENST00000552208 C11orf40Q8WZ69 217 aa1.87□□□□□ -2.11
LSM6P2-201ENST00000552208 SLC39A9Q9NUM3 307 aa1.87□□□□□ -2.11
LSM6P2-201ENST00000552208 SLC35A3Q9Y2D2 325 aa1.87□□□□□ -2.11
LSM6P2-201ENST00000552208 MAST2Q6P0Q8 1798 aa1.87□□□□□ -2.11
LSM6P2-201ENST00000552208 TRGV4A0A0C4DH28 118 aa1.86□□□□□ -2.11
LSM6P2-201ENST00000552208 ARRDC5A6NEK1 342 aa1.86□□□□□ -2.11
LSM6P2-201ENST00000552208 ZNF860A6NHJ4 632 aa1.86□□□□□ -2.11
LSM6P2-201ENST00000552208 PPP5D1E7EU14 171 aa1.86□□□□□ -2.11
LSM6P2-201ENST00000552208 G3V2T6 193 aa1.86□□□□□ -2.11
LSM6P2-201ENST00000552208 H0YJX3 145 aa1.86□□□□□ -2.11
LSM6P2-201ENST00000552208 NAPSAO96009 420 aa1.86□□□□□ -2.11
LSM6P2-201ENST00000552208 IFNA7P01567 189 aa1.86□□□□□ -2.11
LSM6P2-201ENST00000552208 IFI30P13284 250 aa1.86□□□□□ -2.11
LSM6P2-201ENST00000552208 PEBP1P30086 187 aaKnown RBP1.86□□□□□ -2.11
LSM6P2-201ENST00000552208 TCTAP57738 103 aa1.86□□□□□ -2.11
LSM6P2-201ENST00000552208 YPEL3P61236 119 aaPredicted RBP1.86□□□□□ -2.11
LSM6P2-201ENST00000552208 SNCBQ16143 134 aa1.86□□□□□ -2.11
LSM6P2-201ENST00000552208 RRN3P1Q2M238 152 aa1.86□□□□□ -2.11
LSM6P2-201ENST00000552208 KRTAP6-3Q3LI67 103 aa1.86□□□□□ -2.11
LSM6P2-201ENST00000552208 AKR1C8PQ5T2L2 129 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms