RNA–Protein interactions for RNA: ENST00000550375.1

BRF1-217, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-217ENST00000550375 PINX1Q96BK5 328 aaKnown RBP13.3□□□□□ -0.28
BRF1-217ENST00000550375 IGHV4OR15-8A0A075B7B6 117 aa13.29□□□□□ -0.28
BRF1-217ENST00000550375 A0A087WW49 117 aa13.29□□□□□ -0.28
BRF1-217ENST00000550375 GOSR2O14653 212 aa13.29□□□□□ -0.28
BRF1-217ENST00000550375 MED6O75586 246 aa13.29□□□□□ -0.28
BRF1-217ENST00000550375 TRBV12-3P01733 135 aa13.29□□□□□ -0.28
BRF1-217ENST00000550375 MYCNOSP40205 109 aa13.29□□□□□ -0.28
BRF1-217ENST00000550375 NKX2-1P43699 371 aaPredicted RBP13.29□□□□□ -0.28
BRF1-217ENST00000550375 PRR31Q5SQ13 230 aa13.29□□□□□ -0.28
BRF1-217ENST00000550375 GSG1LQ6UXU4 331 aa13.29□□□□□ -0.28
BRF1-217ENST00000550375 EEF1AKMT3Q96AZ1 226 aa13.29□□□□□ -0.28
BRF1-217ENST00000550375 PEF1Q9UBV8 284 aaKnown RBP13.29□□□□□ -0.28
BRF1-217ENST00000550375 ALG5Q9Y673 324 aa13.29□□□□□ -0.28
BRF1-217ENST00000550375 PKD1L1Q8TDX9 2849 aa13.28□□□□□ -0.28
BRF1-217ENST00000550375 LINC01619G3V211 115 aa13.28□□□□□ -0.28
BRF1-217ENST00000550375 WRBO00258 174 aa13.28□□□□□ -0.28
BRF1-217ENST00000550375 SYNGR2O43760 224 aa13.28□□□□□ -0.28
BRF1-217ENST00000550375 SIX6O95475 246 aa13.28□□□□□ -0.28
BRF1-217ENST00000550375 IFNA10P01566 189 aa13.28□□□□□ -0.28
BRF1-217ENST00000550375 HSPB1P04792 205 aaKnown RBP13.28□□□□□ -0.28
BRF1-217ENST00000550375 HTR2BP41595 481 aa13.28□□□□□ -0.28
BRF1-217ENST00000550375 ID3Q02535 119 aa13.28□□□□□ -0.28
BRF1-217ENST00000550375 ZNF616Q08AN1 781 aa13.28□□□□□ -0.28
BRF1-217ENST00000550375 SLC24A4Q8NFF2 622 aa13.28□□□□□ -0.28
BRF1-217ENST00000550375 CXorf58Q96LI9 332 aa13.28□□□□□ -0.28
BRF1-217ENST00000550375 C7orf66A4D0T2 115 aa13.27□□□□□ -0.29
BRF1-217ENST00000550375 K7EIM0 57 aa13.27□□□□□ -0.29
BRF1-217ENST00000550375 IGHV3-48P01763 117 aa13.27□□□□□ -0.29
BRF1-217ENST00000550375 SLURP1P55000 103 aa13.27□□□□□ -0.29
BRF1-217ENST00000550375 POLR2GP62487 172 aaKnown RBP eCLIP13.27□□□□□ -0.29
BRF1-217ENST00000550375 OXA1LQ15070 435 aa13.27□□□□□ -0.29
BRF1-217ENST00000550375 BSXQ3C1V8 233 aa13.27□□□□□ -0.29
BRF1-217ENST00000550375 TREML4Q6UXN2 200 aa13.27□□□□□ -0.29
BRF1-217ENST00000550375 CLEC19AQ6UXS0 136 aa13.27□□□□□ -0.29
BRF1-217ENST00000550375 SCARB1Q8WTV0 552 aa13.27□□□□□ -0.29
BRF1-217ENST00000550375 C2orf50Q96LR7 162 aa13.27□□□□□ -0.29
BRF1-217ENST00000550375 CCDC140Q96MF4 163 aa13.27□□□□□ -0.29
BRF1-217ENST00000550375 RANGRFQ9HD47 186 aaPredicted RBP13.27□□□□□ -0.29
BRF1-217ENST00000550375 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.26□□□□□ -0.29
BRF1-217ENST00000550375 PPP5D1E7EU14 171 aa13.26□□□□□ -0.29
BRF1-217ENST00000550375 SSSCA1O60232 199 aa13.26□□□□□ -0.29
BRF1-217ENST00000550375 MT-CO2P00403 227 aa13.26□□□□□ -0.29
BRF1-217ENST00000550375 NPY1RP25929 384 aa13.26□□□□□ -0.29
BRF1-217ENST00000550375 FHL3Q13643 280 aa13.26□□□□□ -0.29
BRF1-217ENST00000550375 C2orf83Q53S99 150 aa13.26□□□□□ -0.29
BRF1-217ENST00000550375 LINC00482Q8N8I6 264 aa13.26□□□□□ -0.29
BRF1-217ENST00000550375 ZNF502Q8TBZ5 544 aa13.26□□□□□ -0.29
BRF1-217ENST00000550375 VN1R17PQ8TDU5 208 aa13.26□□□□□ -0.29
BRF1-217ENST00000550375 TMEM170AQ8WVE7 144 aa13.26□□□□□ -0.29
BRF1-217ENST00000550375 ZC4H2Q9NQZ6 224 aa13.26□□□□□ -0.29
BRF1-217ENST00000550375 PAIP2BQ9ULR5 123 aaKnown RBP13.26□□□□□ -0.29
BRF1-217ENST00000550375 U3KQ87 197 aa13.26□□□□□ -0.29
BRF1-217ENST00000550375 TRBV7-1A0A0A6YYK4 115 aa13.25□□□□□ -0.29
BRF1-217ENST00000550375 I3L2K1 104 aa13.25□□□□□ -0.29
BRF1-217ENST00000550375 MBPP02686 304 aaPredicted RBP13.25□□□□□ -0.29
BRF1-217ENST00000550375 PVRIGQ6DKI7 326 aa13.25□□□□□ -0.29
BRF1-217ENST00000550375 UBAC2Q8NBM4 344 aa13.25□□□□□ -0.29
BRF1-217ENST00000550375 CIB3Q96Q77 187 aaPredicted RBP13.25□□□□□ -0.29
BRF1-217ENST00000550375 C21orf62Q9NYP8 219 aa13.25□□□□□ -0.29
BRF1-217ENST00000550375 LSM5Q9Y4Y9 91 aaKnown RBP13.25□□□□□ -0.29
BRF1-217ENST00000550375 CORTO00230 105 aa13.24□□□□□ -0.29
BRF1-217ENST00000550375 CLEC3BP05452 202 aa13.24□□□□□ -0.29
BRF1-217ENST00000550375 OR8U8P0C7N1 319 aa13.24□□□□□ -0.29
BRF1-217ENST00000550375 CD33P20138 364 aa13.24□□□□□ -0.29
BRF1-217ENST00000550375 HOXD3P31249 432 aaPredicted RBP13.24□□□□□ -0.29
BRF1-217ENST00000550375 GPR183P32249 361 aa13.24□□□□□ -0.29
BRF1-217ENST00000550375 OPRK1P41145 380 aa13.24□□□□□ -0.29
BRF1-217ENST00000550375 MLANAQ16655 118 aa13.24□□□□□ -0.29
BRF1-217ENST00000550375 Q56UQ5 140 aa13.24□□□□□ -0.29
BRF1-217ENST00000550375 CMYA5Q8N3K9 4069 aa13.24□□□□□ -0.29
BRF1-217ENST00000550375 MGAT4CQ9UBM8 478 aa13.24□□□□□ -0.29
BRF1-217ENST00000550375 OR2T8A6NH00 312 aa13.23□□□□□ -0.29
BRF1-217ENST00000550375 H3BP45 60 aa13.23□□□□□ -0.29
BRF1-217ENST00000550375 BMPR1BO00238 502 aa13.23□□□□□ -0.29
BRF1-217ENST00000550375 ARL3P36405 182 aa13.23□□□□□ -0.29
BRF1-217ENST00000550375 S100A10P60903 97 aa13.23□□□□□ -0.29
BRF1-217ENST00000550375 SPANXN5Q5MJ07 72 aa13.23□□□□□ -0.29
BRF1-217ENST00000550375 NOXA1Q86UR1 476 aa13.23□□□□□ -0.29
BRF1-217ENST00000550375 DCUN1D4Q92564 292 aa13.23□□□□□ -0.29
BRF1-217ENST00000550375 OR4C12Q96R67 309 aa13.23□□□□□ -0.29
BRF1-217ENST00000550375 PSENENQ9NZ42 101 aa13.23□□□□□ -0.29
BRF1-217ENST00000550375 RCL1Q9Y2P8 373 aaKnown RBP13.23□□□□□ -0.29
BRF1-217ENST00000550375 C15orf62A8K5M9 175 aa13.22□□□□□ -0.29
BRF1-217ENST00000550375 IFNA4P05014 189 aa13.22□□□□□ -0.29
BRF1-217ENST00000550375 ZP3P21754 424 aa13.22□□□□□ -0.29
BRF1-217ENST00000550375 MFAP4P55083 255 aa13.22□□□□□ -0.29
BRF1-217ENST00000550375 RPEL1Q2QD12 228 aa13.22□□□□□ -0.29
BRF1-217ENST00000550375 FAM209BQ5JX69 171 aa13.22□□□□□ -0.29
BRF1-217ENST00000550375 ACSM6Q6P461 480 aa13.22□□□□□ -0.29
BRF1-217ENST00000550375 DLX4Q92988 240 aaPredicted RBP13.22□□□□□ -0.29
BRF1-217ENST00000550375 FNDC4Q9H6D8 234 aaPredicted RBP13.22□□□□□ -0.29
BRF1-217ENST00000550375 MGAM2Q2M2H8 2515 aa13.22□□□□□ -0.29
BRF1-217ENST00000550375 NOTCH3Q9UM47 2321 aa13.22□□□□□ -0.29
BRF1-217ENST00000550375 F8W735 103 aaPredicted RBP13.21□□□□□ -0.29
BRF1-217ENST00000550375 K7EPK0 472 aa13.21□□□□□ -0.29
BRF1-217ENST00000550375 OR2C1O95371 312 aa13.21□□□□□ -0.29
BRF1-217ENST00000550375 TMEM50AO95807 157 aa13.21□□□□□ -0.29
BRF1-217ENST00000550375 H2BFSP57053 126 aa13.21□□□□□ -0.29
BRF1-217ENST00000550375 RAB11AP62491 216 aa13.21□□□□□ -0.29
BRF1-217ENST00000550375 RPP30P78346 268 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms