RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 BUB1B-PAK6H3BSN5 160 aa1.48□□□□□ -2.17
PRKDC-205ENST00000535375 OR2J2O76002 312 aa1.48□□□□□ -2.17
PRKDC-205ENST00000535375 CST2P09228 141 aa1.48□□□□□ -2.17
PRKDC-205ENST00000535375 RPS4Y1P22090 263 aaKnown RBP1.48□□□□□ -2.17
PRKDC-205ENST00000535375 TMEM155Q4W5P6 130 aa1.48□□□□□ -2.17
PRKDC-205ENST00000535375 SPANXN3Q5MJ09 141 aa1.48□□□□□ -2.17
PRKDC-205ENST00000535375 OOSP2Q86WS3 158 aa1.48□□□□□ -2.17
PRKDC-205ENST00000535375 GDPD1Q8N9F7 314 aa1.48□□□□□ -2.17
PRKDC-205ENST00000535375 C11orf40Q8WZ69 217 aa1.48□□□□□ -2.17
PRKDC-205ENST00000535375 ZNF625Q96I27 306 aaPredicted RBP1.48□□□□□ -2.17
PRKDC-205ENST00000535375 LHFPL6Q9Y693 200 aa1.48□□□□□ -2.17
PRKDC-205ENST00000535375 CUL9Q8IWT3 2517 aa1.48□□□□□ -2.17
PRKDC-205ENST00000535375 CPAMD8Q8IZJ3 1885 aa1.48□□□□□ -2.17
PRKDC-205ENST00000535375 GBF1Q92538 1859 aa1.48□□□□□ -2.17
PRKDC-205ENST00000535375 TRAV9-1A0A075B6T8 112 aa1.47□□□□□ -2.17
PRKDC-205ENST00000535375 PDE6DO43924 150 aa1.47□□□□□ -2.17
PRKDC-205ENST00000535375 OR7C1O76099 320 aaPredicted RBP1.47□□□□□ -2.17
PRKDC-205ENST00000535375 CRYZL1O95825 349 aa1.47□□□□□ -2.17
PRKDC-205ENST00000535375 IFNA10P01566 189 aa1.47□□□□□ -2.17
PRKDC-205ENST00000535375 DEFA1P59665 94 aa1.47□□□□□ -2.17
PRKDC-205ENST00000535375 MOGQ16653 247 aa1.47□□□□□ -2.17
PRKDC-205ENST00000535375 Q6ZSA8 131 aa1.47□□□□□ -2.17
PRKDC-205ENST00000535375 SLC36A1Q7Z2H8 476 aa1.47□□□□□ -2.17
PRKDC-205ENST00000535375 DHFR2Q86XF0 187 aa1.47□□□□□ -2.17
PRKDC-205ENST00000535375 TMEM86AQ8N2M4 240 aa1.47□□□□□ -2.17
PRKDC-205ENST00000535375 OR51A2Q8NGJ7 313 aa1.47□□□□□ -2.17
PRKDC-205ENST00000535375 MCFD2Q8NI22 146 aa1.47□□□□□ -2.17
PRKDC-205ENST00000535375 PSTPIP2Q9H939 334 aa1.47□□□□□ -2.17
PRKDC-205ENST00000535375 UQCC1Q9NVA1 299 aa1.47□□□□□ -2.17
PRKDC-205ENST00000535375 BAIAP2Q9UQB8 552 aa1.47□□□□□ -2.17
PRKDC-205ENST00000535375 HECW1Q76N89 1606 aa1.47□□□□□ -2.17
PRKDC-205ENST00000535375 C19orf84I3L1E1 186 aa1.46□□□□□ -2.18
PRKDC-205ENST00000535375 PIRO00625 290 aa1.46□□□□□ -2.18
PRKDC-205ENST00000535375 SERPINE1P05121 402 aa1.46□□□□□ -2.18
PRKDC-205ENST00000535375 RBP1P09455 135 aa1.46□□□□□ -2.18
PRKDC-205ENST00000535375 TRGC1P0CF51 173 aa1.46□□□□□ -2.18
PRKDC-205ENST00000535375 ZNF705BP0CI00 300 aaPredicted RBP1.46□□□□□ -2.18
PRKDC-205ENST00000535375 CDC42P60953 191 aa1.46□□□□□ -2.18
PRKDC-205ENST00000535375 SPA17Q15506 151 aa1.46□□□□□ -2.18
PRKDC-205ENST00000535375 TEX36Q5VZQ5 186 aa1.46□□□□□ -2.18
PRKDC-205ENST00000535375 COA5Q86WW8 74 aa1.46□□□□□ -2.18
PRKDC-205ENST00000535375 ZNF439Q8NDP4 499 aa1.46□□□□□ -2.18
PRKDC-205ENST00000535375 SIGMAR1Q99720 223 aa1.46□□□□□ -2.18
PRKDC-205ENST00000535375 RNF122Q9H9V4 155 aa1.46□□□□□ -2.18
PRKDC-205ENST00000535375 TOPBP1Q92547 1522 aa1.45□□□□□ -2.18
PRKDC-205ENST00000535375 TTC21AQ8NDW8 1320 aa1.45□□□□□ -2.18
PRKDC-205ENST00000535375 NUMA1Q14980 2115 aa1.45□□□□□ -2.18
PRKDC-205ENST00000535375 IGKV2-29A2NJV5 120 aaPredicted RBP1.45□□□□□ -2.18
PRKDC-205ENST00000535375 FAM159BA6NKW6 160 aa1.45□□□□□ -2.18
PRKDC-205ENST00000535375 ARF6P62330 175 aa1.45□□□□□ -2.18
PRKDC-205ENST00000535375 MRPS25P82663 173 aaKnown RBP1.45□□□□□ -2.18
PRKDC-205ENST00000535375 ZNF345Q14585 488 aa1.45□□□□□ -2.18
PRKDC-205ENST00000535375 Q1T7F1 81 aa1.45□□□□□ -2.18
PRKDC-205ENST00000535375 ARHGAP11BQ3KRB8 267 aa1.45□□□□□ -2.18
PRKDC-205ENST00000535375 C7orf65Q6ZTY9 151 aa1.45□□□□□ -2.18
PRKDC-205ENST00000535375 OR8B3Q8NGG8 313 aa1.45□□□□□ -2.18
PRKDC-205ENST00000535375 DGCR14Q96DF8 476 aaKnown RBP1.45□□□□□ -2.18
PRKDC-205ENST00000535375 NMNAT1Q9HAN9 279 aaPredicted RBP1.45□□□□□ -2.18
PRKDC-205ENST00000535375 PARVBQ9HBI1 364 aa1.45□□□□□ -2.18
PRKDC-205ENST00000535375 ARL2BPQ9Y2Y0 163 aa1.45□□□□□ -2.18
PRKDC-205ENST00000535375 RGS12O14924 1447 aa1.45□□□□□ -2.18
PRKDC-205ENST00000535375 TONSLQ96HA7 1378 aa1.45□□□□□ -2.18
PRKDC-205ENST00000535375 FN1P02751 2386 aaKnown RBP1.44□□□□□ -2.18
PRKDC-205ENST00000535375 GREB1Q4ZG55 1949 aa1.44□□□□□ -2.18
PRKDC-205ENST00000535375 MEIKINA0A087WXM9 373 aa1.44□□□□□ -2.18
PRKDC-205ENST00000535375 TRAPPC13A5PLN9 417 aa1.44□□□□□ -2.18
PRKDC-205ENST00000535375 SERPINA1P01009 418 aa1.44□□□□□ -2.18
PRKDC-205ENST00000535375 GPX1P07203 203 aa1.44□□□□□ -2.18
PRKDC-205ENST00000535375 C8GP07360 202 aa1.44□□□□□ -2.18
PRKDC-205ENST00000535375 METTL15P1P0C7V9 234 aa1.44□□□□□ -2.18
PRKDC-205ENST00000535375 GPX2P18283 190 aa1.44□□□□□ -2.18
PRKDC-205ENST00000535375 NDUFA5Q16718 116 aa1.44□□□□□ -2.18
PRKDC-205ENST00000535375 LIN52Q52LA3 116 aa1.44□□□□□ -2.18
PRKDC-205ENST00000535375 FAM173BQ6P4H8 233 aa1.44□□□□□ -2.18
PRKDC-205ENST00000535375 MIR17HGQ75NE6 70 aa1.44□□□□□ -2.18
PRKDC-205ENST00000535375 OR10X1Q8NGY0 326 aa1.44□□□□□ -2.18
PRKDC-205ENST00000535375 TMEM106AQ96A25 262 aa1.44□□□□□ -2.18
PRKDC-205ENST00000535375 C2orf50Q96LR7 162 aa1.44□□□□□ -2.18
PRKDC-205ENST00000535375 SCGB3A1Q96QR1 104 aa1.44□□□□□ -2.18
PRKDC-205ENST00000535375 CYSLTR1Q9Y271 337 aa1.44□□□□□ -2.18
PRKDC-205ENST00000535375 PTPRBP23467 1997 aa1.44□□□□□ -2.18
PRKDC-205ENST00000535375 HELZ2Q9BYK8 2649 aaKnown RBP1.44□□□□□ -2.18
PRKDC-205ENST00000535375 ZFHX2Q9C0A1 2572 aaPredicted RBP1.44□□□□□ -2.18
PRKDC-205ENST00000535375 DOCK10Q96BY6 2186 aa1.43□□□□□ -2.18
PRKDC-205ENST00000535375 hCG_1818297A0A087WSY0 165 aa1.43□□□□□ -2.18
PRKDC-205ENST00000535375 A8MT66 165 aa1.43□□□□□ -2.18
PRKDC-205ENST00000535375 ORC5O43913 435 aa1.43□□□□□ -2.18
PRKDC-205ENST00000535375 OR2B3O76000 313 aa1.43□□□□□ -2.18
PRKDC-205ENST00000535375 SHBGP04278 402 aa1.43□□□□□ -2.18
PRKDC-205ENST00000535375 PPIBP23284 216 aaKnown RBP1.43□□□□□ -2.18
PRKDC-205ENST00000535375 NNATQ16517 81 aa1.43□□□□□ -2.18
PRKDC-205ENST00000535375 Q6Q795 121 aa1.43□□□□□ -2.18
PRKDC-205ENST00000535375 LCN15Q6UWW0 184 aa1.43□□□□□ -2.18
PRKDC-205ENST00000535375 Q6ZQT0 140 aa1.43□□□□□ -2.18
PRKDC-205ENST00000535375 DEFB128Q7Z7B8 93 aa1.43□□□□□ -2.18
PRKDC-205ENST00000535375 OR11H6Q8NGC7 330 aa1.43□□□□□ -2.18
PRKDC-205ENST00000535375 OR52R1Q8NGF1 315 aa1.43□□□□□ -2.18
PRKDC-205ENST00000535375 MBD3L1Q8WWY6 194 aa1.43□□□□□ -2.18
PRKDC-205ENST00000535375 BTF3L4Q96K17 158 aa1.43□□□□□ -2.18
PRKDC-205ENST00000535375 CCDC90BQ9GZT6 254 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms