RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 CENPWQ5EE01 88 aa14.55□□□□□ -0.08
CCHCR1-228ENST00000509552 ZNF503Q96F45 646 aa14.55□□□□□ -0.08
CCHCR1-228ENST00000509552 C14orf144Q96I85 54 aa14.55□□□□□ -0.08
CCHCR1-228ENST00000509552 CEP250Q9BV73 2442 aa14.55□□□□□ -0.08
CCHCR1-228ENST00000509552 CUL9Q8IWT3 2517 aa14.55□□□□□ -0.08
CCHCR1-228ENST00000509552 TIGITQ495A1 244 aa14.55□□□□□ -0.08
CCHCR1-228ENST00000509552 LINC00311Q8N616 119 aa14.55□□□□□ -0.08
CCHCR1-228ENST00000509552 C8orf31Q8N9H6 132 aa14.55□□□□□ -0.08
CCHCR1-228ENST00000509552 SLC25A33Q9BSK2 321 aa14.55□□□□□ -0.08
CCHCR1-228ENST00000509552 A0A1W2PRE2 83 aa14.54□□□□□ -0.08
CCHCR1-228ENST00000509552 OR10J4P0C629 311 aa14.54□□□□□ -0.08
CCHCR1-228ENST00000509552 SUB1P53999 127 aaKnown RBP eCLIP14.54□□□□□ -0.08
CCHCR1-228ENST00000509552 RPL19P84098 196 aaKnown RBP14.54□□□□□ -0.08
CCHCR1-228ENST00000509552 REC114Q7Z4M0 266 aa14.54□□□□□ -0.08
CCHCR1-228ENST00000509552 OR2T6Q8NHC8 308 aa14.54□□□□□ -0.08
CCHCR1-228ENST00000509552 JKAMPQ9P055 326 aa14.54□□□□□ -0.08
CCHCR1-228ENST00000509552 ZNF292O60281 2723 aa14.54□□□□□ -0.08
CCHCR1-228ENST00000509552 FCN3O75636 299 aa14.54□□□□□ -0.08
CCHCR1-228ENST00000509552 OR5I1Q13606 314 aa14.54□□□□□ -0.08
CCHCR1-228ENST00000509552 IQCJQ1A5X6 159 aa14.54□□□□□ -0.08
CCHCR1-228ENST00000509552 LYPD2Q6UXB3 125 aa14.54□□□□□ -0.08
CCHCR1-228ENST00000509552 MMD2Q8IY49 270 aa14.54□□□□□ -0.08
CCHCR1-228ENST00000509552 NOL4LQ96MY1 436 aaPredicted RBP14.54□□□□□ -0.08
CCHCR1-228ENST00000509552 WASHC3Q9Y3C0 194 aa14.54□□□□□ -0.08
CCHCR1-228ENST00000509552 LGALS4P56470 323 aa14.53□□□□□ -0.08
CCHCR1-228ENST00000509552 SUMO1P63165 101 aaKnown RBP14.53□□□□□ -0.08
CCHCR1-228ENST00000509552 ZNF596Q8TC21 504 aa14.53□□□□□ -0.08
CCHCR1-228ENST00000509552 DNAJC4Q9NNZ3 241 aa14.53□□□□□ -0.08
CCHCR1-228ENST00000509552 DYNLRB1Q9NP97 96 aa14.53□□□□□ -0.08
CCHCR1-228ENST00000509552 NGBQ9NPG2 151 aa14.53□□□□□ -0.08
CCHCR1-228ENST00000509552 V9GYV3 84 aa14.53□□□□□ -0.08
CCHCR1-228ENST00000509552 CBLN1P23435 193 aa14.53□□□□□ -0.08
CCHCR1-228ENST00000509552 TMEM256Q8N2U0 113 aa14.53□□□□□ -0.08
CCHCR1-228ENST00000509552 OR1L6Q8NGR2 347 aa14.53□□□□□ -0.08
CCHCR1-228ENST00000509552 RNASE6Q93091 150 aaKnown RBP14.53□□□□□ -0.08
CCHCR1-228ENST00000509552 MRPL18Q9H0U6 180 aaKnown RBP14.53□□□□□ -0.08
CCHCR1-228ENST00000509552 MAP1BP46821 2468 aaKnown RBP14.53□□□□□ -0.08
CCHCR1-228ENST00000509552 LAMA5O15230 3695 aa14.53□□□□□ -0.08
CCHCR1-228ENST00000509552 MGAQ8IWI9 3026 aa14.52□□□□□ -0.08
CCHCR1-228ENST00000509552 GGTLC3B5MD39 225 aa14.52□□□□□ -0.08
CCHCR1-228ENST00000509552 E7EUB6 86 aa14.52□□□□□ -0.08
CCHCR1-228ENST00000509552 TNFRSF13BO14836 293 aaPredicted RBP14.52□□□□□ -0.08
CCHCR1-228ENST00000509552 SELENOTP62341 195 aa14.52□□□□□ -0.08
CCHCR1-228ENST00000509552 TGIF2LXQ8IUE1 241 aa14.52□□□□□ -0.08
CCHCR1-228ENST00000509552 ZNF664Q8N3J9 261 aa14.52□□□□□ -0.08
CCHCR1-228ENST00000509552 PAX1P15863 534 aa14.52□□□□□ -0.09
CCHCR1-228ENST00000509552 DIAPH2-AS1Q14236 149 aa14.52□□□□□ -0.09
CCHCR1-228ENST00000509552 VMA21Q3ZAQ7 101 aa14.52□□□□□ -0.09
CCHCR1-228ENST00000509552 WFIKKN1Q96NZ8 548 aa14.52□□□□□ -0.09
CCHCR1-228ENST00000509552 FCN1O00602 326 aa14.51□□□□□ -0.09
CCHCR1-228ENST00000509552 COX7A2P2O60397 106 aa14.51□□□□□ -0.09
CCHCR1-228ENST00000509552 MC5RP33032 325 aa14.51□□□□□ -0.09
CCHCR1-228ENST00000509552 UBE2L3P68036 154 aaKnown RBP14.51□□□□□ -0.09
CCHCR1-228ENST00000509552 WT1-ASQ06250 92 aa14.51□□□□□ -0.09
CCHCR1-228ENST00000509552 OR1L4Q8NGR5 311 aa14.51□□□□□ -0.09
CCHCR1-228ENST00000509552 CMTM2Q8TAZ6 248 aa14.51□□□□□ -0.09
CCHCR1-228ENST00000509552 ST6GALNAC6Q969X2 333 aa14.51□□□□□ -0.09
CCHCR1-228ENST00000509552 ZNF430Q9H8G1 570 aaPredicted RBP14.51□□□□□ -0.09
CCHCR1-228ENST00000509552 OSTCQ9NRP0 149 aa14.51□□□□□ -0.09
CCHCR1-228ENST00000509552 TRBV9A0A0B4J1U6 114 aa14.5□□□□□ -0.09
CCHCR1-228ENST00000509552 CRISP2P16562 243 aa14.5□□□□□ -0.09
CCHCR1-228ENST00000509552 LOXP28300 417 aaPredicted RBP14.5□□□□□ -0.09
CCHCR1-228ENST00000509552 SSX2Q16385 188 aa14.5□□□□□ -0.09
CCHCR1-228ENST00000509552 OR8I2Q8N0Y5 310 aa14.5□□□□□ -0.09
CCHCR1-228ENST00000509552 SLC25A2Q9BXI2 301 aa14.5□□□□□ -0.09
CCHCR1-228ENST00000509552 KAAG1Q9UBP8 84 aa14.5□□□□□ -0.09
CCHCR1-228ENST00000509552 CTSZQ9UBR2 303 aa14.5□□□□□ -0.09
CCHCR1-228ENST00000509552 A0A1B0GUS0 222 aa14.5□□□□□ -0.09
CCHCR1-228ENST00000509552 GRIFINA4D1Z8 144 aa14.5□□□□□ -0.09
CCHCR1-228ENST00000509552 PSMB11A5LHX3 300 aa14.5□□□□□ -0.09
CCHCR1-228ENST00000509552 SCGB1D1O95968 90 aa14.5□□□□□ -0.09
CCHCR1-228ENST00000509552 IGLV2-23P01705 113 aa14.5□□□□□ -0.09
CCHCR1-228ENST00000509552 IER3P46695 156 aa14.5□□□□□ -0.09
CCHCR1-228ENST00000509552 ZNF137PP52743 207 aa14.5□□□□□ -0.09
CCHCR1-228ENST00000509552 BPIFB3P59826 476 aa14.5□□□□□ -0.09
CCHCR1-228ENST00000509552 Q8NA96 180 aa14.5□□□□□ -0.09
CCHCR1-228ENST00000509552 OR5AU1Q8NGC0 362 aa14.5□□□□□ -0.09
CCHCR1-228ENST00000509552 A8MWP6 167 aa14.49□□□□□ -0.09
CCHCR1-228ENST00000509552 PPOXP50336 477 aa14.49□□□□□ -0.09
CCHCR1-228ENST00000509552 C10orf55Q5SWW7 151 aa14.49□□□□□ -0.09
CCHCR1-228ENST00000509552 C10orf113Q5VZT2 155 aa14.49□□□□□ -0.09
CCHCR1-228ENST00000509552 ZGRF1Q86YA3 2104 aa14.49□□□□□ -0.09
CCHCR1-228ENST00000509552 PRSS33Q8NF86 280 aa14.49□□□□□ -0.09
CCHCR1-228ENST00000509552 NPIPB3Q92617 1050 aa14.49□□□□□ -0.09
CCHCR1-228ENST00000509552 FAM167A-AS1Q96KT0 104 aa14.49□□□□□ -0.09
CCHCR1-228ENST00000509552 MS4A10Q96PG2 267 aa14.49□□□□□ -0.09
CCHCR1-228ENST00000509552 ZNF835Q9Y2P0 537 aa14.49□□□□□ -0.09
CCHCR1-228ENST00000509552 TRAV5A0A0B4J249 113 aa14.49□□□□□ -0.09
CCHCR1-228ENST00000509552 TCRBV4S1A1TA0A5B7 111 aa14.49□□□□□ -0.09
CCHCR1-228ENST00000509552 CGB1A6NKQ9 187 aa14.49□□□□□ -0.09
CCHCR1-228ENST00000509552 SNURFLB1AK76 121 aa14.49□□□□□ -0.09
CCHCR1-228ENST00000509552 ISLRO14498 428 aa14.49□□□□□ -0.09
CCHCR1-228ENST00000509552 SLC25A17O43808 307 aa14.49□□□□□ -0.09
CCHCR1-228ENST00000509552 TMEM155Q4W5P6 130 aa14.49□□□□□ -0.09
CCHCR1-228ENST00000509552 UNQ6494/PRO21346Q6UXR6 183 aa14.49□□□□□ -0.09
CCHCR1-228ENST00000509552 LINC00469Q8N7U9 141 aa14.49□□□□□ -0.09
CCHCR1-228ENST00000509552 GNB1LQ9BYB4 327 aa14.49□□□□□ -0.09
CCHCR1-228ENST00000509552 RNASE7Q9H1E1 156 aaKnown RBP14.49□□□□□ -0.09
CCHCR1-228ENST00000509552 FNDC4Q9H6D8 234 aaPredicted RBP14.49□□□□□ -0.09
CCHCR1-228ENST00000509552 RIF1Q5UIP0 2472 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms