RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 UHRF2Q96PU4 802 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 PFDN5Q99471 154 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 RARRES2Q99969 163 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 SRSF8Q9BRL6 282 aaKnown RBP5.61□□□□□ -1.51
USP39-219ENST00000496047 GGTLC1Q9BX51 225 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 MRPL32Q9BYC8 188 aaKnown RBP5.61□□□□□ -1.51
USP39-219ENST00000496047 SETD2Q9BYW2 2564 aaPredicted RBP5.61□□□□□ -1.51
USP39-219ENST00000496047 VSIRQ9H7M9 311 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 TUBA4BQ9H853 241 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 DPM3Q9P2X0 92 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 SLC45A2Q9UMX9 530 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 ARL2-SNX15V9GYD0 113 aa5.61□□□□□ -1.51
USP39-219ENST00000496047 ABCA4P78363 2273 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 C7orf77A4D0Y5 90 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 FAM74A7A6NL05 159 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 ZNF727A8MUV8 499 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 C1orf196B1AJZ1 125 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 PRSS46E5RG02 174 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 H3BQ15 152 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 HMGB3O15347 200 aaKnown RBP5.6□□□□□ -1.51
USP39-219ENST00000496047 PAX4O43316 350 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 TGOLN2O43493 480 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 FOXH1O75593 365 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 IGLV1-47P01700 117 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 FABP1P07148 127 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 SOD3P08294 240 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 FBP1P09467 338 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 RNASE2P10153 161 aaKnown RBP5.6□□□□□ -1.51
USP39-219ENST00000496047 MDKP21741 143 aaPredicted RBP5.6□□□□□ -1.51
USP39-219ENST00000496047 S100PP25815 95 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 SELENOTP62341 195 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 TPTE2P1Q5T6R2 138 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 MINOS1Q5TGZ0 78 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 C1orf122Q6ZSJ8 110 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 S100A7AQ86SG5 101 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 CBLN2Q8IUK8 224 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 RPP25LQ8N5L8 163 aaKnown RBP5.6□□□□□ -1.51
USP39-219ENST00000496047 STPG3Q8N7X2 389 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 LY6G5BQ8NDX9 201 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 OR4P4Q8NGL7 312 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 OR4F5Q8NH21 305 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 ABHD5Q8WTS1 349 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 BTF3L4Q96K17 158 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 OR4F4Q96R69 305 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 MGST2Q99735 147 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 SMIM7Q9BQ49 75 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 PIMREGQ9BSJ6 248 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 ZNF430Q9H8G1 570 aaPredicted RBP5.6□□□□□ -1.51
USP39-219ENST00000496047 NDUFA4L2Q9NRX3 87 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 TMEM167BQ9NRX6 74 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 METTL1Q9UBP6 276 aaKnown RBP5.6□□□□□ -1.51
USP39-219ENST00000496047 NAT8Q9UHE5 227 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 RFNGQ9Y644 331 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 MINOS1-NBL1R4GNA1 71 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 DOPEY2Q9Y3R5 2298 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 ARHGAP32A7KAX9 2087 aa5.6□□□□□ -1.51
USP39-219ENST00000496047 SPTBN1Q01082 2364 aaKnown RBP5.59□□□□□ -1.51
USP39-219ENST00000496047 WNK2Q9Y3S1 2297 aa5.59□□□□□ -1.51
USP39-219ENST00000496047 CXorf65A6NEN9 183 aa5.59□□□□□ -1.51
USP39-219ENST00000496047 C11orf94C9JXX5 98 aa5.59□□□□□ -1.51
USP39-219ENST00000496047 CLN5O75503 358 aa5.59□□□□□ -1.51
USP39-219ENST00000496047 OR2C1O95371 312 aa5.59□□□□□ -1.51
USP39-219ENST00000496047 MT-ND4LP03901 98 aa5.59□□□□□ -1.51
USP39-219ENST00000496047 OPN1MWP04001 364 aa5.59□□□□□ -1.51
USP39-219ENST00000496047 OPN1MW2P0DN77 364 aa5.59□□□□□ -1.51
USP39-219ENST00000496047 OPN1MW3P0DN78 364 aa5.59□□□□□ -1.51
USP39-219ENST00000496047 PRTN3P24158 256 aa5.59□□□□□ -1.51
USP39-219ENST00000496047 ADMP35318 185 aa5.59□□□□□ -1.51
USP39-219ENST00000496047 CDKN1AP38936 164 aa5.59□□□□□ -1.51
USP39-219ENST00000496047 UQCRFS1P47985 274 aa5.59□□□□□ -1.51
USP39-219ENST00000496047 ARF6P62330 175 aa5.59□□□□□ -1.51
USP39-219ENST00000496047 CCL20P78556 96 aa5.59□□□□□ -1.51
USP39-219ENST00000496047 CDSNQ15517 529 aa5.59□□□□□ -1.51
USP39-219ENST00000496047 MMDQ15546 238 aa5.59□□□□□ -1.51
USP39-219ENST00000496047 ZNF726P1Q15940 193 aa5.59□□□□□ -1.51
USP39-219ENST00000496047 SSX2Q16385 188 aa5.59□□□□□ -1.51
USP39-219ENST00000496047 BSXQ3C1V8 233 aa5.59□□□□□ -1.51
USP39-219ENST00000496047 RNF212Q495C1 297 aa5.59□□□□□ -1.51
USP39-219ENST00000496047 MIC13Q5XKP0 118 aa5.59□□□□□ -1.51
USP39-219ENST00000496047 PQLC2Q6ZP29 291 aa5.59□□□□□ -1.51
USP39-219ENST00000496047 ZNF114Q8NC26 417 aa5.59□□□□□ -1.51
USP39-219ENST00000496047 OR11H6Q8NGC7 330 aa5.59□□□□□ -1.51
USP39-219ENST00000496047 OR2T10Q8NGZ9 312 aa5.59□□□□□ -1.51
USP39-219ENST00000496047 SSMEM1Q8WWF3 244 aa5.59□□□□□ -1.51
USP39-219ENST00000496047 OR5B12Q96R08 314 aa5.59□□□□□ -1.51
USP39-219ENST00000496047 C20orf24Q9BUV8 137 aa5.59□□□□□ -1.51
USP39-219ENST00000496047 SCRT1Q9BWW7 348 aa5.59□□□□□ -1.51
USP39-219ENST00000496047 CTDSP1Q9GZU7 261 aa5.59□□□□□ -1.51
USP39-219ENST00000496047 TECRQ9NZ01 308 aaKnown RBP5.59□□□□□ -1.51
USP39-219ENST00000496047 ZNRD1Q9P1U0 126 aa5.59□□□□□ -1.51
USP39-219ENST00000496047 TBL2Q9Y4P3 447 aaKnown RBP5.59□□□□□ -1.51
USP39-219ENST00000496047 LSM4Q9Y4Z0 139 aaKnown RBP5.59□□□□□ -1.51
USP39-219ENST00000496047 PRRC2CQ9Y520 2896 aaKnown RBP5.59□□□□□ -1.51
USP39-219ENST00000496047 PLXNB1O43157 2135 aa5.59□□□□□ -1.52
USP39-219ENST00000496047 LRRK2Q5S007 2527 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 NAV3Q8IVL0 2385 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 SRRM4A7MD48 611 aaKnown RBP5.58□□□□□ -1.52
USP39-219ENST00000496047 C9JQL5 133 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 CLDN34H7C241 214 aa5.58□□□□□ -1.52
USP39-219ENST00000496047 NDUFS8O00217 210 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms