RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 JPT1Q9UK76 154 aa-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 TP53TG1Q9Y2A0 90 aa-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 SCN10AQ9Y5Y9 1956 aa-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 CACNA1AO00555 2505 aa-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 CACNA1CQ13936 2221 aa-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 KDM6BO15054 1643 aa-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 TOPBP1Q92547 1522 aa-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 BCL9O00512 1426 aa-0.38□□□□□ -2.47
SNHG3-203ENST00000447507 ZDBF2Q9HCK1 2354 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 IGHV1-58A0A0C4DH39 117 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 IGHV1-69-2A0A0G2JMI3 117 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 TRBV30A0A0K0K1B3 111 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 TEX50A0A1B0GTY4 177 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 TINCRA0A1B0GVN0 87 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 PQLC2LA1A4F0 135 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 OR4C45A6NMZ5 311 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 EVPLLA8MZ36 301 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 INMT-MINDY4F8WBC2 141 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 KRT75O95678 551 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 HLA-DRAP01903 254 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 C1QAP02745 245 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 CD2P06729 351 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 CD14P08571 375 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 CALRP27797 417 aaKnown RBP-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 CD151P48509 253 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 CARD18P57730 90 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 PPP1R1AQ13522 171 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 RHEBQ15382 184 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 CLEC12BQ2HXU8 276 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 LINC01554Q52M75 96 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 KHDC3LQ587J8 217 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 SPANXN5Q5MJ07 72 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 FAM74A1Q5RGS3 127 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 C10orf99Q6UWK7 81 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 DEFB128Q7Z7B8 93 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 LYG2Q86SG7 212 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 Q86TA4 180 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 ST13P4Q8IZP2 240 aaPredicted RBP-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 ATOH7Q8N100 152 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 ATP6V1C2Q8NEY4 427 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 PXT1Q8NFP0 134 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 OR5AK3PQ8NH89 298 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 OR10J5Q8NHC4 309 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 TERB2Q8NHR7 220 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 DNAJC9Q8WXX5 260 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 IMP4Q96G21 291 aaKnown RBP-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 SCGB3A1Q96QR1 104 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 RBP7Q96R05 134 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 CYTH2Q99418 400 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 HDHD2Q9H0R4 259 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 WFDC10AQ9H1F0 79 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 OR51V1Q9H2C8 321 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 MIXL1Q9H2W2 232 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 NCOR1P1Q9H4R4 102 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 UBAP1Q9NZ09 502 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 RSL24D1Q9UHA3 163 aaKnown RBP-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 CFAP45Q9UL16 551 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 CHCHD2Q9Y6H1 151 aaPredicted RBP-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 FANCMQ8IYD8 2048 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 RIC1Q4ADV7 1423 aa-0.39□□□□□ -2.47
SNHG3-203ENST00000447507 CECR2Q9BXF3 1484 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 TRBV20OR9-2A0A075B6H5 130 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 TRAV9-1A0A075B6T8 112 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 B4DSR2 109 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 GOLGA6L19H0YKK7 550 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 BUB1B-PAK6H3BSN5 160 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 CCRL2O00421 344 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 FAAHO00519 579 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 NUPR1O60356 82 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 NDUFS6O75380 124 aaKnown RBP-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 FADS2O95864 444 aaKnown RBP-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 BAALC-AS2P0C853 105 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 KDELR2P33947 212 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 DEFA1P59665 94 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 POLR2GP62487 172 aaKnown RBP eCLIP-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 CCL20P78556 96 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 EBPQ15125 230 aaKnown RBP-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 RSU1Q15404 277 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 KRTAP19-7Q3SYF9 63 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 FAM78BQ5VT40 261 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 C5orf46Q6UWT4 87 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 DPPA3Q6W0C5 159 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 PLEKHG7Q6ZR37 379 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 HIST2H3AQ71DI3 136 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 MIR17HGQ75NE6 70 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 PRR15Q8IV56 129 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 Q8IYB0 196 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 SIGLECL1Q8N7X8 197 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 LINC00301Q8NCQ3 95 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 TMEM161BQ8NDZ6 487 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 OR5L1Q8NGL2 311 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 OR8D4Q8NGM9 314 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 PSMF1Q92530 271 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 LINC00052Q96N35 136 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 COMMD5Q9GZQ3 224 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 WDR61Q9GZS3 305 aaKnown RBP-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 C14orf105Q9NVL8 296 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 C1orf109Q9NX04 203 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 CMTM6Q9NX76 183 aa-0.4□□□□□ -2.47
SNHG3-203ENST00000447507 AK3Q9UIJ7 227 aa-0.4□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms