RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 FAM25EA8MYX2 175 aa7.16□□□□□ -1.26
PDGFC-202ENST00000422544 CYB5BO43169 146 aa7.16□□□□□ -1.26
PDGFC-202ENST00000422544 PRAF2O60831 178 aa7.16□□□□□ -1.26
PDGFC-202ENST00000422544 TRBV12-3P01733 135 aa7.16□□□□□ -1.26
PDGFC-202ENST00000422544 PF4P02776 101 aa7.16□□□□□ -1.26
PDGFC-202ENST00000422544 RNASE2P10153 161 aaKnown RBP7.16□□□□□ -1.26
PDGFC-202ENST00000422544 MYCNOSP40205 109 aa7.16□□□□□ -1.26
PDGFC-202ENST00000422544 RUNX1Q01196 453 aa7.16□□□□□ -1.26
PDGFC-202ENST00000422544 EXOSC2Q13868 293 aaKnown RBP7.16□□□□□ -1.26
PDGFC-202ENST00000422544 RGS21Q2M5E4 152 aa7.16□□□□□ -1.26
PDGFC-202ENST00000422544 IAH1Q2TAA2 248 aaPredicted RBP7.16□□□□□ -1.26
PDGFC-202ENST00000422544 ZNF343Q6P1L6 599 aa7.16□□□□□ -1.26
PDGFC-202ENST00000422544 ZNF114Q8NC26 417 aa7.16□□□□□ -1.26
PDGFC-202ENST00000422544 OR1L6Q8NGR2 347 aa7.16□□□□□ -1.26
PDGFC-202ENST00000422544 MISP3Q96FF7 219 aa7.16□□□□□ -1.26
PDGFC-202ENST00000422544 MAGT1Q9H0U3 335 aa7.16□□□□□ -1.26
PDGFC-202ENST00000422544 HIPK2Q9H2X6 1198 aa7.16□□□□□ -1.26
PDGFC-202ENST00000422544 THYN1Q9P016 225 aa7.16□□□□□ -1.26
PDGFC-202ENST00000422544 GSKIPQ9P0R6 139 aa7.16□□□□□ -1.26
PDGFC-202ENST00000422544 EPPK1P58107 5090 aaKnown RBP7.15□□□□□ -1.26
PDGFC-202ENST00000422544 IGHV4OR15-8A0A075B7B6 117 aa7.15□□□□□ -1.26
PDGFC-202ENST00000422544 A0A087WW49 117 aa7.15□□□□□ -1.26
PDGFC-202ENST00000422544 C5orf51A6NDU8 294 aa7.15□□□□□ -1.26
PDGFC-202ENST00000422544 MFSD2BA6NFX1 497 aa7.15□□□□□ -1.26
PDGFC-202ENST00000422544 FAM90A26D6RGX4 464 aa7.15□□□□□ -1.26
PDGFC-202ENST00000422544 HSPB1P04792 205 aaKnown RBP7.15□□□□□ -1.26
PDGFC-202ENST00000422544 IAPPP10997 89 aa7.15□□□□□ -1.26
PDGFC-202ENST00000422544 SUB1P53999 127 aaKnown RBP eCLIP7.15□□□□□ -1.26
PDGFC-202ENST00000422544 ID3Q02535 119 aa7.15□□□□□ -1.26
PDGFC-202ENST00000422544 ZNF616Q08AN1 781 aa7.15□□□□□ -1.26
PDGFC-202ENST00000422544 TATDN3Q17R31 274 aa7.15□□□□□ -1.26
PDGFC-202ENST00000422544 C4orf48Q5BLP8 95 aa7.15□□□□□ -1.26
PDGFC-202ENST00000422544 TREML4Q6UXN2 200 aa7.15□□□□□ -1.26
PDGFC-202ENST00000422544 ZBTB8BQ8NAP8 495 aaPredicted RBP7.15□□□□□ -1.26
PDGFC-202ENST00000422544 OR4D5Q8NGN0 318 aa7.15□□□□□ -1.26
PDGFC-202ENST00000422544 DTD1Q8TEA8 209 aa7.15□□□□□ -1.26
PDGFC-202ENST00000422544 DPF1Q92782 380 aa7.15□□□□□ -1.26
PDGFC-202ENST00000422544 EEF1AKMT3Q96AZ1 226 aa7.15□□□□□ -1.26
PDGFC-202ENST00000422544 PINX1Q96BK5 328 aaKnown RBP7.15□□□□□ -1.26
PDGFC-202ENST00000422544 RANGRFQ9HD47 186 aaPredicted RBP7.15□□□□□ -1.26
PDGFC-202ENST00000422544 PEF1Q9UBV8 284 aaKnown RBP7.15□□□□□ -1.26
PDGFC-202ENST00000422544 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.14□□□□□ -1.27
PDGFC-202ENST00000422544 LINC01619G3V211 115 aa7.14□□□□□ -1.27
PDGFC-202ENST00000422544 I3L2K1 104 aa7.14□□□□□ -1.27
PDGFC-202ENST00000422544 K7EIM0 57 aa7.14□□□□□ -1.27
PDGFC-202ENST00000422544 WRBO00258 174 aa7.14□□□□□ -1.27
PDGFC-202ENST00000422544 SYNGR2O43760 224 aa7.14□□□□□ -1.27
PDGFC-202ENST00000422544 MED6O75586 246 aa7.14□□□□□ -1.27
PDGFC-202ENST00000422544 SCGB1D2O95969 90 aa7.14□□□□□ -1.27
PDGFC-202ENST00000422544 MT-CO2P00403 227 aa7.14□□□□□ -1.27
PDGFC-202ENST00000422544 IFNA10P01566 189 aa7.14□□□□□ -1.27
PDGFC-202ENST00000422544 IGHV3-48P01763 117 aa7.14□□□□□ -1.27
PDGFC-202ENST00000422544 CLEC3BP05452 202 aa7.14□□□□□ -1.27
PDGFC-202ENST00000422544 HTR2BP41595 481 aa7.14□□□□□ -1.27
PDGFC-202ENST00000422544 NKX2-1P43699 371 aaPredicted RBP7.14□□□□□ -1.27
PDGFC-202ENST00000422544 SLURP1P55000 103 aa7.14□□□□□ -1.27
PDGFC-202ENST00000422544 POLR2GP62487 172 aaKnown RBP eCLIP7.14□□□□□ -1.27
PDGFC-202ENST00000422544 FHL3Q13643 280 aa7.14□□□□□ -1.27
PDGFC-202ENST00000422544 MLANAQ16655 118 aa7.14□□□□□ -1.27
PDGFC-202ENST00000422544 BSXQ3C1V8 233 aa7.14□□□□□ -1.27
PDGFC-202ENST00000422544 PVRIGQ6DKI7 326 aa7.14□□□□□ -1.27
PDGFC-202ENST00000422544 CLEC19AQ6UXS0 136 aa7.14□□□□□ -1.27
PDGFC-202ENST00000422544 LINC00482Q8N8I6 264 aa7.14□□□□□ -1.27
PDGFC-202ENST00000422544 SLC24A4Q8NFF2 622 aa7.14□□□□□ -1.27
PDGFC-202ENST00000422544 VN1R17PQ8TDU5 208 aa7.14□□□□□ -1.27
PDGFC-202ENST00000422544 SCARB1Q8WTV0 552 aa7.14□□□□□ -1.27
PDGFC-202ENST00000422544 TMEM170AQ8WVE7 144 aa7.14□□□□□ -1.27
PDGFC-202ENST00000422544 CXorf58Q96LI9 332 aa7.14□□□□□ -1.27
PDGFC-202ENST00000422544 CCDC140Q96MF4 163 aa7.14□□□□□ -1.27
PDGFC-202ENST00000422544 ALG5Q9Y673 324 aa7.14□□□□□ -1.27
PDGFC-202ENST00000422544 U3KQ87 197 aa7.14□□□□□ -1.27
PDGFC-202ENST00000422544 TRBV7-1A0A0A6YYK4 115 aa7.13□□□□□ -1.27
PDGFC-202ENST00000422544 PPP5D1E7EU14 171 aa7.13□□□□□ -1.27
PDGFC-202ENST00000422544 GOSR2O14653 212 aa7.13□□□□□ -1.27
PDGFC-202ENST00000422544 SSNA1O43805 119 aa7.13□□□□□ -1.27
PDGFC-202ENST00000422544 SIX6O95475 246 aa7.13□□□□□ -1.27
PDGFC-202ENST00000422544 MBPP02686 304 aaPredicted RBP7.13□□□□□ -1.27
PDGFC-202ENST00000422544 OR8U8P0C7N1 319 aa7.13□□□□□ -1.27
PDGFC-202ENST00000422544 CD33P20138 364 aa7.13□□□□□ -1.27
PDGFC-202ENST00000422544 NPY1RP25929 384 aa7.13□□□□□ -1.27
PDGFC-202ENST00000422544 OXA1LQ15070 435 aa7.13□□□□□ -1.27
PDGFC-202ENST00000422544 C2orf83Q53S99 150 aa7.13□□□□□ -1.27
PDGFC-202ENST00000422544 GSG1LQ6UXU4 331 aa7.13□□□□□ -1.27
PDGFC-202ENST00000422544 WFDC9Q8NEX5 89 aa7.13□□□□□ -1.27
PDGFC-202ENST00000422544 ZNF502Q8TBZ5 544 aa7.13□□□□□ -1.27
PDGFC-202ENST00000422544 DCUN1D4Q92564 292 aa7.13□□□□□ -1.27
PDGFC-202ENST00000422544 C2orf50Q96LR7 162 aa7.13□□□□□ -1.27
PDGFC-202ENST00000422544 ZC4H2Q9NQZ6 224 aa7.13□□□□□ -1.27
PDGFC-202ENST00000422544 C21orf62Q9NYP8 219 aa7.13□□□□□ -1.27
PDGFC-202ENST00000422544 NOTCH3Q9UM47 2321 aa7.13□□□□□ -1.27
PDGFC-202ENST00000422544 C7orf66A4D0T2 115 aa7.12□□□□□ -1.27
PDGFC-202ENST00000422544 CORTO00230 105 aa7.12□□□□□ -1.27
PDGFC-202ENST00000422544 BMPR1BO00238 502 aa7.12□□□□□ -1.27
PDGFC-202ENST00000422544 SSSCA1O60232 199 aa7.12□□□□□ -1.27
PDGFC-202ENST00000422544 OR2C1O95371 312 aa7.12□□□□□ -1.27
PDGFC-202ENST00000422544 IFNA4P05014 189 aa7.12□□□□□ -1.27
PDGFC-202ENST00000422544 HOXD3P31249 432 aaPredicted RBP7.12□□□□□ -1.27
PDGFC-202ENST00000422544 GPR183P32249 361 aa7.12□□□□□ -1.27
PDGFC-202ENST00000422544 ARL3P36405 182 aa7.12□□□□□ -1.27
PDGFC-202ENST00000422544 OPRK1P41145 380 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms