RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 RPL15P61313 204 aaKnown RBP13.63□□□□□ -0.23
NUP50-203ENST00000407019 HLA-DRB5Q30154 266 aa13.63□□□□□ -0.23
NUP50-203ENST00000407019 ZNF503Q96F45 646 aa13.63□□□□□ -0.23
NUP50-203ENST00000407019 LAMA5O15230 3695 aa13.63□□□□□ -0.23
NUP50-203ENST00000407019 CD3EP07766 207 aa13.62□□□□□ -0.23
NUP50-203ENST00000407019 VMA21Q3ZAQ7 101 aa13.62□□□□□ -0.23
NUP50-203ENST00000407019 SCNM1Q9BWG6 230 aa13.62□□□□□ -0.23
NUP50-203ENST00000407019 ZNF430Q9H8G1 570 aaPredicted RBP13.62□□□□□ -0.23
NUP50-203ENST00000407019 CGB1A6NKQ9 187 aa13.62□□□□□ -0.23
NUP50-203ENST00000407019 B9A039 149 aa13.62□□□□□ -0.23
NUP50-203ENST00000407019 K7EN84 100 aa13.62□□□□□ -0.23
NUP50-203ENST00000407019 AMBPP02760 352 aa13.62□□□□□ -0.23
NUP50-203ENST00000407019 HIST1H1BP16401 226 aaKnown RBP13.62□□□□□ -0.23
NUP50-203ENST00000407019 MC5RP33032 325 aa13.62□□□□□ -0.23
NUP50-203ENST00000407019 C10orf55Q5SWW7 151 aa13.62□□□□□ -0.23
NUP50-203ENST00000407019 OR2T6Q8NHC8 308 aa13.62□□□□□ -0.23
NUP50-203ENST00000407019 RNASEH2CQ8TDP1 164 aaKnown RBP13.62□□□□□ -0.23
NUP50-203ENST00000407019 EAF1Q96JC9 268 aaPredicted RBP13.62□□□□□ -0.23
NUP50-203ENST00000407019 MRPL32Q9BYC8 188 aaKnown RBP13.62□□□□□ -0.23
NUP50-203ENST00000407019 TRAPPC1Q9Y5R8 145 aa13.62□□□□□ -0.23
NUP50-203ENST00000407019 C8orf88P0DMB2 117 aa13.61□□□□□ -0.23
NUP50-203ENST00000407019 SUB1P53999 127 aaKnown RBP eCLIP13.61□□□□□ -0.23
NUP50-203ENST00000407019 WT1-ASQ06250 92 aa13.61□□□□□ -0.23
NUP50-203ENST00000407019 RNF2Q99496 336 aa13.61□□□□□ -0.23
NUP50-203ENST00000407019 TRBV23-1A0A0A0MS06 115 aa13.6□□□□□ -0.23
NUP50-203ENST00000407019 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.6□□□□□ -0.23
NUP50-203ENST00000407019 FAM87AP0C7U9 286 aa13.6□□□□□ -0.23
NUP50-203ENST00000407019 TMEM133Q9H2Q1 129 aa13.6□□□□□ -0.23
NUP50-203ENST00000407019 ANKRD11Q6UB99 2663 aaPredicted RBP13.6□□□□□ -0.23
NUP50-203ENST00000407019 BSNQ9UPA5 3926 aa13.6□□□□□ -0.23
NUP50-203ENST00000407019 SLC25A17O43808 307 aa13.6□□□□□ -0.23
NUP50-203ENST00000407019 RD3LP0DJH9 198 aa13.6□□□□□ -0.23
NUP50-203ENST00000407019 CRYBB3P26998 211 aa13.6□□□□□ -0.23
NUP50-203ENST00000407019 CNN1P51911 297 aaKnown RBP13.6□□□□□ -0.23
NUP50-203ENST00000407019 SLC25A33Q9BSK2 321 aa13.6□□□□□ -0.23
NUP50-203ENST00000407019 IL36BQ9NZH7 164 aa13.6□□□□□ -0.23
NUP50-203ENST00000407019 CEP250Q9BV73 2442 aa13.6□□□□□ -0.23
NUP50-203ENST00000407019 GVINP1Q7Z2Y8 2422 aa13.59□□□□□ -0.23
NUP50-203ENST00000407019 TRAV9-1A0A075B6T8 112 aa13.59□□□□□ -0.23
NUP50-203ENST00000407019 TRAV20A0A0B4J274 112 aa13.59□□□□□ -0.23
NUP50-203ENST00000407019 PSMB11A5LHX3 300 aa13.59□□□□□ -0.23
NUP50-203ENST00000407019 OR10J4P0C629 311 aa13.59□□□□□ -0.23
NUP50-203ENST00000407019 PRDM13Q9H4Q3 707 aa13.59□□□□□ -0.23
NUP50-203ENST00000407019 FNDC4Q9H6D8 234 aaPredicted RBP13.59□□□□□ -0.23
NUP50-203ENST00000407019 TNCP24821 2201 aa13.59□□□□□ -0.23
NUP50-203ENST00000407019 HELTA6NFD8 242 aa13.59□□□□□ -0.23
NUP50-203ENST00000407019 LGALS7P47929 136 aa13.59□□□□□ -0.23
NUP50-203ENST00000407019 GNG4P50150 75 aa13.59□□□□□ -0.23
NUP50-203ENST00000407019 PPOXP50336 477 aa13.59□□□□□ -0.23
NUP50-203ENST00000407019 ZNF90Q03938 601 aa13.59□□□□□ -0.23
NUP50-203ENST00000407019 PRSS8Q16651 343 aa13.59□□□□□ -0.23
NUP50-203ENST00000407019 CENPWQ5EE01 88 aa13.59□□□□□ -0.23
NUP50-203ENST00000407019 C11orf42Q8N5U0 333 aa13.59□□□□□ -0.23
NUP50-203ENST00000407019 TPSG1Q9NRR2 321 aa13.59□□□□□ -0.23
NUP50-203ENST00000407019 A0A1W2PRE2 83 aa13.58□□□□□ -0.24
NUP50-203ENST00000407019 GGTLC3B5MD39 225 aa13.58□□□□□ -0.24
NUP50-203ENST00000407019 ENSAO43768 121 aaKnown RBP13.58□□□□□ -0.24
NUP50-203ENST00000407019 SSBP2P81877 361 aaPredicted RBP13.58□□□□□ -0.24
NUP50-203ENST00000407019 OR5R1Q8NH85 324 aa13.58□□□□□ -0.24
NUP50-203ENST00000407019 TNFRSF14Q92956 283 aa13.58□□□□□ -0.24
NUP50-203ENST00000407019 DNAJC4Q9NNZ3 241 aa13.58□□□□□ -0.24
NUP50-203ENST00000407019 A0A1W2PPI3 338 aa13.57□□□□□ -0.24
NUP50-203ENST00000407019 SLC17A3O00476 420 aa13.57□□□□□ -0.24
NUP50-203ENST00000407019 COX7A2P2O60397 106 aa13.57□□□□□ -0.24
NUP50-203ENST00000407019 PLAUP00749 431 aa13.57□□□□□ -0.24
NUP50-203ENST00000407019 CASP6P55212 293 aa13.57□□□□□ -0.24
NUP50-203ENST00000407019 JOSD1Q15040 202 aaPredicted RBP13.57□□□□□ -0.24
NUP50-203ENST00000407019 NPIPB3Q92617 1050 aa13.57□□□□□ -0.24
NUP50-203ENST00000407019 RITA1Q96K30 269 aa13.57□□□□□ -0.24
NUP50-203ENST00000407019 SLC25A2Q9BXI2 301 aa13.57□□□□□ -0.24
NUP50-203ENST00000407019 RALYQ9UKM9 306 aaKnown RBP13.57□□□□□ -0.24
NUP50-203ENST00000407019 ACACAQ13085 2346 aa13.57□□□□□ -0.24
NUP50-203ENST00000407019 IGHV3-72A0A0B4J1Y9 119 aa13.57□□□□□ -0.24
NUP50-203ENST00000407019 TCRBV4S1A1TA0A5B7 111 aa13.57□□□□□ -0.24
NUP50-203ENST00000407019 ERVFC1-1P60608 527 aa13.57□□□□□ -0.24
NUP50-203ENST00000407019 YPEL3P61236 119 aaPredicted RBP13.57□□□□□ -0.24
NUP50-203ENST00000407019 UBE2L3P68036 154 aaKnown RBP13.57□□□□□ -0.24
NUP50-203ENST00000407019 OR1L4Q8NGR5 311 aa13.57□□□□□ -0.24
NUP50-203ENST00000407019 FAM167A-AS1Q96KT0 104 aa13.57□□□□□ -0.24
NUP50-203ENST00000407019 ATMQ13315 3056 aa13.56□□□□□ -0.24
NUP50-203ENST00000407019 IGHV2-26A0A0B4J1V2 119 aa13.56□□□□□ -0.24
NUP50-203ENST00000407019 SUMO1P63165 101 aaKnown RBP13.56□□□□□ -0.24
NUP50-203ENST00000407019 OR5I1Q13606 314 aa13.56□□□□□ -0.24
NUP50-203ENST00000407019 MRGPRG-AS1Q2M3A8 158 aa13.56□□□□□ -0.24
NUP50-203ENST00000407019 MORN5Q5VZ52 161 aa13.56□□□□□ -0.24
NUP50-203ENST00000407019 MRPL41Q8IXM3 137 aaKnown RBP13.56□□□□□ -0.24
NUP50-203ENST00000407019 TEX45Q8NA69 505 aa13.56□□□□□ -0.24
NUP50-203ENST00000407019 THAP8Q8NA92 274 aa13.56□□□□□ -0.24
NUP50-203ENST00000407019 LINC01560Q8TB33 94 aa13.56□□□□□ -0.24
NUP50-203ENST00000407019 TMEM18Q96B42 140 aa13.56□□□□□ -0.24
NUP50-203ENST00000407019 APC2O95996 2303 aa13.56□□□□□ -0.24
NUP50-203ENST00000407019 TRAV5A0A0B4J249 113 aa13.55□□□□□ -0.24
NUP50-203ENST00000407019 FAM90A27PA6NNH2 459 aa13.55□□□□□ -0.24
NUP50-203ENST00000407019 PRRX1P54821 245 aa13.55□□□□□ -0.24
NUP50-203ENST00000407019 BPIFB3P59826 476 aa13.55□□□□□ -0.24
NUP50-203ENST00000407019 RPEL1Q2QD12 228 aa13.55□□□□□ -0.24
NUP50-203ENST00000407019 C9orf152Q5JTZ5 239 aa13.55□□□□□ -0.24
NUP50-203ENST00000407019 OR5AU1Q8NGC0 362 aa13.55□□□□□ -0.24
NUP50-203ENST00000407019 V9GYV3 84 aa13.55□□□□□ -0.24
NUP50-203ENST00000407019 MUC6Q6W4X9 2439 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms