RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 FOLR2P14207 255 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 MESP2Q0VG99 397 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 OR10J3Q5JRS4 329 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 SMIM8Q96KF7 97 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 MARVELD1Q9BSK0 173 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 TLNRD1Q9H1K6 362 aa2.31□□□□□ -2.04
CHD9-202ENST00000398510 MRPL16Q9NX20 251 aaKnown RBP2.31□□□□□ -2.04
CHD9-202ENST00000398510 TCRBV5S1A1TA0A578 114 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 A6NNC1 897 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 TSPAN13O95857 204 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 CD160O95971 181 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 CA1P00915 261 aaPredicted RBP2.3□□□□□ -2.04
CHD9-202ENST00000398510 PRCDQ00LT1 54 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 ZNF585BQ52M93 769 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 MEIG1Q5JSS6 88 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 C1orf194Q5T5A4 169 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 HOGA1Q86XE5 327 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 RNF185Q96GF1 192 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 LIN28AQ9H9Z2 209 aaKnown RBP2.3□□□□□ -2.04
CHD9-202ENST00000398510 NCOR2Q9Y618 2525 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 PROB1E7EW31 1015 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 ZNF205O95201 554 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 OR9G9P0C7N8 305 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 RPL32P62910 135 aaKnown RBP2.3□□□□□ -2.04
CHD9-202ENST00000398510 FXYD3Q14802 87 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 PLAC9Q5JTB6 97 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 TMEM91Q6ZNR0 172 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 ORMDL3Q8N138 153 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 CTHRC1Q96CG8 243 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 RNF167Q9H6Y7 350 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 PARD6AQ9NPB6 346 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 C17orf100A8MU93 164 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 A8MWV9 139 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 DEFB108AA8MXU0 73 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 EIF3GO75821 320 aaKnown RBP eCLIP2.3□□□□□ -2.04
CHD9-202ENST00000398510 HLA-DRB1P01911 266 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 LMO1P25800 156 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 LOXL1Q08397 574 aaPredicted RBP2.3□□□□□ -2.04
CHD9-202ENST00000398510 OR10S1Q8NGN2 331 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 PATE1Q8WXA2 126 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 MARVELD3Q96A59 401 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 SHISA4Q96DD7 197 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 TINAGQ9UJW2 476 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 CHTOPQ9Y3Y2 248 aaKnown RBP2.3□□□□□ -2.04
CHD9-202ENST00000398510 TSSC4Q9Y5U2 329 aaPredicted RBP2.3□□□□□ -2.04
CHD9-202ENST00000398510 EVI2AP22794 236 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 FBLN7Q53RD9 439 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 NKAPP1Q8N9T2 125 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 Q8NFD4 153 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 TEX37Q96LM6 180 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 SLC25A39Q9BZJ4 359 aaPredicted RBP2.3□□□□□ -2.04
CHD9-202ENST00000398510 IGKV3D-15A0A087WSY6 115 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 ZNF561-AS1K7EIQ3 104 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 PSPNO60542 156 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 LGALS1P09382 135 aaKnown RBP2.3□□□□□ -2.04
CHD9-202ENST00000398510 MRPL52Q86TS9 123 aaKnown RBP2.3□□□□□ -2.04
CHD9-202ENST00000398510 HILPDAQ9Y5L2 63 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 A0A1B0GVG6 124 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 OR2W5A6NFC9 320 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 HTN1P15515 57 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 CAMPP49913 170 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 EGR4Q05215 589 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 C11orf42Q8N5U0 333 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 MRPL18Q9H0U6 180 aaKnown RBP2.3□□□□□ -2.04
CHD9-202ENST00000398510 TRBV7-9A0A0J9YWB2 115 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 TSPAN2O60636 221 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 SAP30O75446 220 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 TMEM50AO95807 157 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 ARL14EPLP0DKL9 152 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 TMEM50BP56557 158 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 RNF125Q96EQ8 232 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 TBX15Q96SF7 602 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 RARRES2Q99969 163 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 TRBV20OR9-2A0A075B6H5 130 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 SPAARA0A1B0GVQ0 90 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 ZNF672Q499Z4 452 aaPredicted RBP2.3□□□□□ -2.04
CHD9-202ENST00000398510 BIVMQ86UB2 503 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 CCL4L1Q8NHW4 92 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 RGP1Q92546 391 aaPredicted RBP2.3□□□□□ -2.04
CHD9-202ENST00000398510 DKK4Q9UBT3 224 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 RFNGQ9Y644 331 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 TRAV41A0A0B4J266 112 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 TRGV4A0A0C4DH28 118 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 NPIPB9F8W1W9 429 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 NPIPB7O75200 414 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 IGKV1D-33P01593 117 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 IGKV1-33P01594 117 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 LINC00271P0C7V0 271 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 TDGF1P13385 188 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 PAX8Q06710 450 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 PPP1R1AQ13522 171 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 OR2B11Q5JQS5 317 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 BHLHA9Q7RTU4 235 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 OR4D5Q8NGN0 318 aa2.3□□□□□ -2.04
CHD9-202ENST00000398510 RCC2Q9P258 522 aaKnown RBP2.3□□□□□ -2.04
CHD9-202ENST00000398510 A6NIN4 97 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 SLURP2P0DP57 97 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 IAPPP10997 89 aa2.29□□□□□ -2.04
CHD9-202ENST00000398510 RCC1P18754 421 aaPredicted RBP2.29□□□□□ -2.04
CHD9-202ENST00000398510 C9orf66Q5T8R8 295 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms