RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 AMBPP02760 352 aa7.59□□□□□ -1.2
LIMCH1-202ENST00000381753 CDX1P47902 265 aaPredicted RBP7.59□□□□□ -1.2
LIMCH1-202ENST00000381753 C5orf64Q2M2E5 130 aa7.59□□□□□ -1.2
LIMCH1-202ENST00000381753 PPP1R1CQ8WVI7 109 aa7.59□□□□□ -1.2
LIMCH1-202ENST00000381753 TCTEX1D4Q5JR98 221 aa7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 ZNF324BQ6AW86 544 aaPredicted RBP7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 CD300LDQ6UXZ3 194 aa7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 FAM169BQ8N8A8 192 aa7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 ZNF502Q8TBZ5 544 aa7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 DAZ1Q9NQZ3 744 aaKnown RBP7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 BDP1A6H8Y1 2624 aa7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 ELOA3CA0A087WX78 387 aaPredicted RBP7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 IGHV2-5P01817 119 aa7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 KLF17Q5JT82 389 aaPredicted RBP7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 SLC25A38Q96DW6 304 aa7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 C11orf68Q9H3H3 251 aaKnown RBP7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 Q9HAA7 133 aa7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 MANBALQ9NQG1 85 aa7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 KLHDC2Q9Y2U9 406 aa7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 DOPEY2Q9Y3R5 2298 aa7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 DNAJC9-AS1A6NH13 148 aa7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 C15orf61A6NNL5 157 aa7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 HLA-DRB1P01911 266 aa7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 SAA1P0DJI8 122 aaPredicted RBP7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 GPX4P36969 197 aaPredicted RBP7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 PKIAP61925 76 aa7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 LRRC75AQ8NAA5 344 aa7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 HS3ST6Q96QI5 342 aa7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 PIKFYVEQ9Y2I7 2098 aa7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 PI4KAP42356 2102 aa7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 SRSF10O75494 262 aaKnown RBP7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 FCN3O75636 299 aa7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 FGF8P55075 233 aaPredicted RBP7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 ICAM4Q14773 271 aa7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 MZB1Q8WU39 189 aa7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 C12orf57Q99622 126 aa7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 RHPN1-AS1Q9BWJ2 59 aa7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 MAP1LC3CQ9BXW4 147 aa7.58□□□□□ -1.2
LIMCH1-202ENST00000381753 MIA3Q5JRA6 1907 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 NPIPB13A6NJU9 1138 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 NPIPB4C9JG80 1138 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 BCL2L11O43521 198 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 COX6CP09669 75 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 NAA50Q9GZZ1 169 aaKnown RBP7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 IFT22Q9H7X7 185 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 PCNX1Q96RV3 2341 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 ZNF561-AS1K7EIQ3 104 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 NDPQ00604 133 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 TIAL1Q01085 375 aaKnown RBP eCLIP7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 COX19Q49B96 90 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 FAM71F2Q6NXP2 309 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 LINC00305Q7Z4B0 112 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 RAB24Q969Q5 203 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 RAB37Q96AX2 223 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 RCC1LQ96I51 464 aaKnown RBP7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 SPTAN1Q13813 2472 aaKnown RBP7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 NPIPB8E9PQR5 432 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 NPIPB9F8W1W9 429 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 NPIPB7O75200 414 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 SELLP14151 372 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 MYCNOSP40205 109 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 NMUP48645 174 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 RPL36AP83881 106 aaKnown RBP7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 SAPCD1Q5SSQ6 148 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 TEX261Q6UWH6 196 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 FGFRL1Q8N441 504 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 RPL36ALQ969Q0 106 aaKnown RBP7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 TMEM191AQ9H0A3 160 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 RBKSQ9H477 322 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 LOC389332A0A1B0GUA5 103 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 M0R2Z0 102 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 CKS1BP61024 79 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 LOXL1Q08397 574 aaPredicted RBP7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 SPATA25Q9BR10 227 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 LIME1Q9H400 295 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 RNF167Q9H6Y7 350 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 H3BVH4 76 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 TCL1AP56279 114 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 SCAND1P57086 179 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 HILS1P60008 231 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 SURF2Q15527 256 aaPredicted RBP7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 TMEM255AQ5JRV8 349 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 PRR31Q5SQ13 230 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 LINC00469Q8N7U9 141 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 SLC35B3Q9H1N7 401 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 GPR132Q9UNW8 380 aa7.57□□□□□ -1.2
LIMCH1-202ENST00000381753 PTHLHP12272 177 aa7.56□□□□□ -1.2
LIMCH1-202ENST00000381753 P2RY1P47900 373 aa7.56□□□□□ -1.2
LIMCH1-202ENST00000381753 VWC2Q2TAL6 325 aa7.56□□□□□ -1.2
LIMCH1-202ENST00000381753 GOLT1AQ6ZVE7 132 aa7.56□□□□□ -1.2
LIMCH1-202ENST00000381753 REC114Q7Z4M0 266 aa7.56□□□□□ -1.2
LIMCH1-202ENST00000381753 RCC2Q9P258 522 aaKnown RBP7.56□□□□□ -1.2
LIMCH1-202ENST00000381753 MTCL1Q9Y4B5 1905 aaKnown RBP7.56□□□□□ -1.2
LIMCH1-202ENST00000381753 HEPN1Q6WQI6 88 aa7.56□□□□□ -1.2
LIMCH1-202ENST00000381753 IGKV1D-42A0A075B6H8 117 aa7.56□□□□□ -1.2
LIMCH1-202ENST00000381753 IGKV2D-24A0A075B6R9 120 aa7.56□□□□□ -1.2
LIMCH1-202ENST00000381753 A0A0G2JK05 382 aa7.56□□□□□ -1.2
LIMCH1-202ENST00000381753 APOMO95445 188 aa7.56□□□□□ -1.2
LIMCH1-202ENST00000381753 ZNF250P15622 560 aa7.56□□□□□ -1.2
LIMCH1-202ENST00000381753 PAX9P55771 341 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms