RNA–Protein interactions for RNA: ENST00000378980.7

CNTFR-202, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-202ENST00000378980 HIST1H2BJP06899 126 aa17.27■□□□□ 0.35
CNTFR-202ENST00000378980 HIST1H2BOP23527 126 aa17.27■□□□□ 0.35
CNTFR-202ENST00000378980 HIST1H2BBP33778 126 aa17.27■□□□□ 0.35
CNTFR-202ENST00000378980 HIST1H2BDP58876 126 aa17.27■□□□□ 0.35
CNTFR-202ENST00000378980 HIST1H2BCP62807 126 aa17.27■□□□□ 0.35
CNTFR-202ENST00000378980 PRB3Q04118 309 aaPredicted RBP17.27■□□□□ 0.35
CNTFR-202ENST00000378980 HIST2H2BEQ16778 126 aa17.27■□□□□ 0.35
CNTFR-202ENST00000378980 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.27■□□□□ 0.35
CNTFR-202ENST00000378980 OR2T6Q8NHC8 308 aa17.27■□□□□ 0.35
CNTFR-202ENST00000378980 HIST1H2BHQ93079 126 aa17.27■□□□□ 0.35
CNTFR-202ENST00000378980 HIST1H2BNQ99877 126 aa17.27■□□□□ 0.35
CNTFR-202ENST00000378980 HIST1H2BMQ99879 126 aa17.27■□□□□ 0.35
CNTFR-202ENST00000378980 S100PP25815 95 aa17.26■□□□□ 0.35
CNTFR-202ENST00000378980 SUB1P53999 127 aaKnown RBP eCLIP17.26■□□□□ 0.35
CNTFR-202ENST00000378980 TEX45Q8NA69 505 aa17.26■□□□□ 0.35
CNTFR-202ENST00000378980 C19orf24Q9BVV8 132 aa17.26■□□□□ 0.35
CNTFR-202ENST00000378980 CBLN4Q9NTU7 201 aa17.26■□□□□ 0.35
CNTFR-202ENST00000378980 MIOXQ9UGB7 285 aa17.26■□□□□ 0.35
CNTFR-202ENST00000378980 PLXNB1O43157 2135 aa17.26■□□□□ 0.35
CNTFR-202ENST00000378980 A0A1W2PPI3 338 aa17.25■□□□□ 0.35
CNTFR-202ENST00000378980 OR5G3P0C626 314 aa17.25■□□□□ 0.35
CNTFR-202ENST00000378980 ACY3Q96HD9 319 aa17.25■□□□□ 0.35
CNTFR-202ENST00000378980 ELOVL1Q9BW60 279 aa17.25■□□□□ 0.35
CNTFR-202ENST00000378980 FNDC4Q9H6D8 234 aaPredicted RBP17.25■□□□□ 0.35
CNTFR-202ENST00000378980 HRNRQ86YZ3 2850 aaPredicted RBP17.25■□□□□ 0.35
CNTFR-202ENST00000378980 IGHV1-3A0A0C4DH29 117 aa17.25■□□□□ 0.35
CNTFR-202ENST00000378980 PCP4L1A6NKN8 68 aa17.25■□□□□ 0.35
CNTFR-202ENST00000378980 C11orf71Q6IPW1 123 aa17.25■□□□□ 0.35
CNTFR-202ENST00000378980 OR5T1Q8NG75 326 aa17.25■□□□□ 0.35
CNTFR-202ENST00000378980 TECRQ9NZ01 308 aaKnown RBP17.25■□□□□ 0.35
CNTFR-202ENST00000378980 ARL2-SNX15V9GYD0 113 aa17.25■□□□□ 0.35
CNTFR-202ENST00000378980 TRBV20OR9-2A0A075B6H5 130 aa17.24■□□□□ 0.35
CNTFR-202ENST00000378980 PHOX2AO14813 284 aa17.24■□□□□ 0.35
CNTFR-202ENST00000378980 LY6HO94772 140 aa17.24■□□□□ 0.35
CNTFR-202ENST00000378980 CD99P14209 185 aa17.24■□□□□ 0.35
CNTFR-202ENST00000378980 HOXA5P20719 270 aa17.24■□□□□ 0.35
CNTFR-202ENST00000378980 TCEAL7Q9BRU2 100 aa17.24■□□□□ 0.35
CNTFR-202ENST00000378980 INSIG2Q9Y5U4 225 aa17.24■□□□□ 0.35
CNTFR-202ENST00000378980 CRYGBP07316 175 aa17.24■□□□□ 0.35
CNTFR-202ENST00000378980 SMIM6P0DI80 62 aa17.24■□□□□ 0.35
CNTFR-202ENST00000378980 COX7A1P24310 79 aa17.24■□□□□ 0.35
CNTFR-202ENST00000378980 NDUFA6P56556 154 aa17.24■□□□□ 0.35
CNTFR-202ENST00000378980 PSG5Q15238 335 aa17.24■□□□□ 0.35
CNTFR-202ENST00000378980 ZNF114Q8NC26 417 aa17.24■□□□□ 0.35
CNTFR-202ENST00000378980 LY6G5BQ8NDX9 201 aa17.24■□□□□ 0.35
CNTFR-202ENST00000378980 FRZBQ92765 325 aa17.24■□□□□ 0.35
CNTFR-202ENST00000378980 C11orf52Q96A22 123 aa17.24■□□□□ 0.35
CNTFR-202ENST00000378980 SRD5A3Q9H8P0 318 aa17.24■□□□□ 0.35
CNTFR-202ENST00000378980 TMEM167BQ9NRX6 74 aa17.24■□□□□ 0.35
CNTFR-202ENST00000378980 COL6A6A6NMZ7 2263 aa17.23■□□□□ 0.35
CNTFR-202ENST00000378980 AREGP15514 252 aa17.23■□□□□ 0.35
CNTFR-202ENST00000378980 PRSS8Q16651 343 aa17.23■□□□□ 0.35
CNTFR-202ENST00000378980 MMD2Q8IY49 270 aa17.23■□□□□ 0.35
CNTFR-202ENST00000378980 ZNF503Q96F45 646 aa17.23■□□□□ 0.35
CNTFR-202ENST00000378980 AMMECR1Q9Y4X0 333 aaPredicted RBP17.23■□□□□ 0.35
CNTFR-202ENST00000378980 IGLC7A0M8Q6 106 aa17.22■□□□□ 0.35
CNTFR-202ENST00000378980 PGPEP1LA6NFU8 196 aa17.22■□□□□ 0.35
CNTFR-202ENST00000378980 C1QTNF9P0C862 333 aa17.22■□□□□ 0.35
CNTFR-202ENST00000378980 CNTFRP26992 372 aa17.22■□□□□ 0.35
CNTFR-202ENST00000378980 SRP14P37108 136 aaKnown RBP17.22■□□□□ 0.35
CNTFR-202ENST00000378980 SSBP2P81877 361 aaPredicted RBP17.22■□□□□ 0.35
CNTFR-202ENST00000378980 PQLC2Q6ZP29 291 aa17.22■□□□□ 0.35
CNTFR-202ENST00000378980 TMEM37Q8WXS4 190 aa17.22■□□□□ 0.35
CNTFR-202ENST00000378980 AURKAIP1Q9NWT8 199 aaPredicted RBP17.22■□□□□ 0.35
CNTFR-202ENST00000378980 PSMB11A5LHX3 300 aa17.22■□□□□ 0.35
CNTFR-202ENST00000378980 C22orf46C9J442 243 aa17.22■□□□□ 0.35
CNTFR-202ENST00000378980 REG1AP05451 166 aa17.22■□□□□ 0.35
CNTFR-202ENST00000378980 LIPFP07098 398 aa17.22■□□□□ 0.35
CNTFR-202ENST00000378980 TRGC1P0CF51 173 aa17.22■□□□□ 0.35
CNTFR-202ENST00000378980 TIMD4Q96H15 378 aa17.22■□□□□ 0.35
CNTFR-202ENST00000378980 UHRF2Q96PU4 802 aa17.22■□□□□ 0.35
CNTFR-202ENST00000378980 ONECUT1Q9UBC0 465 aa17.22■□□□□ 0.35
CNTFR-202ENST00000378980 CHD8Q9HCK8 2581 aa17.21■□□□□ 0.35
CNTFR-202ENST00000378980 SOD3P08294 240 aa17.21■□□□□ 0.35
CNTFR-202ENST00000378980 TAS2R45P59539 299 aa17.21■□□□□ 0.35
CNTFR-202ENST00000378980 RPEQ96AT9 228 aa17.21■□□□□ 0.35
CNTFR-202ENST00000378980 MRPL32Q9BYC8 188 aaKnown RBP17.21■□□□□ 0.35
CNTFR-202ENST00000378980 SIGLEC9Q9Y336 463 aa17.21■□□□□ 0.35
CNTFR-202ENST00000378980 GGCTO75223 188 aaKnown RBP17.2■□□□□ 0.34
CNTFR-202ENST00000378980 RPL27AP46776 148 aaKnown RBP17.2■□□□□ 0.34
CNTFR-202ENST00000378980 CDX1P47902 265 aaPredicted RBP17.2■□□□□ 0.34
CNTFR-202ENST00000378980 MRPL41Q8IXM3 137 aaKnown RBP17.2■□□□□ 0.34
CNTFR-202ENST00000378980 THAP8Q8NA92 274 aa17.2■□□□□ 0.34
CNTFR-202ENST00000378980 NPIPB3Q92617 1050 aa17.2■□□□□ 0.34
CNTFR-202ENST00000378980 SLC25A33Q9BSK2 321 aa17.2■□□□□ 0.34
CNTFR-202ENST00000378980 LY6LH3BQJ8 138 aa17.2■□□□□ 0.34
CNTFR-202ENST00000378980 OR7C2O60412 319 aa17.2■□□□□ 0.34
CNTFR-202ENST00000378980 S100A9P06702 114 aaKnown RBP17.2■□□□□ 0.34
CNTFR-202ENST00000378980 LY6DQ14210 128 aa17.2■□□□□ 0.34
CNTFR-202ENST00000378980 TNXAQ16473 311 aa17.2■□□□□ 0.34
CNTFR-202ENST00000378980 PVRIGQ6DKI7 326 aa17.2■□□□□ 0.34
CNTFR-202ENST00000378980 NEU4Q8WWR8 484 aaPredicted RBP17.2■□□□□ 0.34
CNTFR-202ENST00000378980 IGKV1D-37A0A075B6S9 117 aa17.19■□□□□ 0.34
CNTFR-202ENST00000378980 A0A1W2PPQ1 181 aa17.19■□□□□ 0.34
CNTFR-202ENST00000378980 PPP1R2P9O14990 202 aa17.19■□□□□ 0.34
CNTFR-202ENST00000378980 C8orf88P0DMB2 117 aa17.19■□□□□ 0.34
CNTFR-202ENST00000378980 COMPP49747 757 aaPredicted RBP17.19■□□□□ 0.34
CNTFR-202ENST00000378980 OR2T10Q8NGZ9 312 aa17.19■□□□□ 0.34
CNTFR-202ENST00000378980 RNF2Q99496 336 aa17.19■□□□□ 0.34
CNTFR-202ENST00000378980 MRPL36Q9P0J6 103 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms