RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 PEA15Q15121 130 aa13.81□□□□□ -0.2
THUMPD2-201ENST00000378727 SLC16A13Q7RTY0 426 aa13.81□□□□□ -0.2
THUMPD2-201ENST00000378727 RNASEH2CQ8TDP1 164 aaKnown RBP13.81□□□□□ -0.2
THUMPD2-201ENST00000378727 CACNG8Q8WXS5 425 aa13.81□□□□□ -0.2
THUMPD2-201ENST00000378727 IGHV3OR16-10A0A075B7F0 116 aa13.81□□□□□ -0.2
THUMPD2-201ENST00000378727 RBFOX3A6NFN3 312 aa13.81□□□□□ -0.2
THUMPD2-201ENST00000378727 F8W036 122 aa13.81□□□□□ -0.2
THUMPD2-201ENST00000378727 J3QKU1 62 aa13.81□□□□□ -0.2
THUMPD2-201ENST00000378727 ACOT6Q3I5F7 207 aaPredicted RBP13.81□□□□□ -0.2
THUMPD2-201ENST00000378727 RUSC1-AS1Q66K80 236 aa13.81□□□□□ -0.2
THUMPD2-201ENST00000378727 FAM122CQ6P4D5 195 aa13.81□□□□□ -0.2
THUMPD2-201ENST00000378727 MRPL41Q8IXM3 137 aaKnown RBP13.81□□□□□ -0.2
THUMPD2-201ENST00000378727 OR2T6Q8NHC8 308 aa13.81□□□□□ -0.2
THUMPD2-201ENST00000378727 SLC39A9Q9NUM3 307 aa13.81□□□□□ -0.2
THUMPD2-201ENST00000378727 CARHSP1Q9Y2V2 147 aaKnown RBP13.81□□□□□ -0.2
THUMPD2-201ENST00000378727 CTXND1A0A1B0GTU2 59 aa13.8□□□□□ -0.2
THUMPD2-201ENST00000378727 HMGB3O15347 200 aaKnown RBP13.8□□□□□ -0.2
THUMPD2-201ENST00000378727 SOX15O60248 233 aa13.8□□□□□ -0.2
THUMPD2-201ENST00000378727 HAGHQ16775 308 aa13.8□□□□□ -0.2
THUMPD2-201ENST00000378727 SEC11CQ9BY50 192 aa13.8□□□□□ -0.2
THUMPD2-201ENST00000378727 DOPEY2Q9Y3R5 2298 aa13.8□□□□□ -0.2
THUMPD2-201ENST00000378727 IGHV1-69DA0A0B4J2H0 117 aa13.79□□□□□ -0.2
THUMPD2-201ENST00000378727 CNIH1O95406 144 aa13.79□□□□□ -0.2
THUMPD2-201ENST00000378727 IGHV1-69P01742 117 aa13.79□□□□□ -0.2
THUMPD2-201ENST00000378727 TMEM11P17152 192 aa13.79□□□□□ -0.2
THUMPD2-201ENST00000378727 PPT1P50897 306 aa13.79□□□□□ -0.2
THUMPD2-201ENST00000378727 GUCA2BQ16661 112 aa13.79□□□□□ -0.2
THUMPD2-201ENST00000378727 ATRAIDQ6UW56 229 aa13.79□□□□□ -0.2
THUMPD2-201ENST00000378727 STPG3Q8N7X2 389 aa13.79□□□□□ -0.2
THUMPD2-201ENST00000378727 RAB24Q969Q5 203 aa13.79□□□□□ -0.2
THUMPD2-201ENST00000378727 ACTR3CQ9C0K3 210 aaPredicted RBP13.79□□□□□ -0.2
THUMPD2-201ENST00000378727 DMRT1Q9Y5R6 373 aa13.79□□□□□ -0.2
THUMPD2-201ENST00000378727 ABCA12Q86UK0 2595 aa13.79□□□□□ -0.2
THUMPD2-201ENST00000378727 TRAV40A0A0B4J280 105 aa13.79□□□□□ -0.2
THUMPD2-201ENST00000378727 B4DSR2 109 aa13.79□□□□□ -0.2
THUMPD2-201ENST00000378727 RPL29P47914 159 aaKnown RBP13.79□□□□□ -0.2
THUMPD2-201ENST00000378727 PRR20EP86478 221 aa13.79□□□□□ -0.2
THUMPD2-201ENST00000378727 PRR20CP86479 221 aa13.79□□□□□ -0.2
THUMPD2-201ENST00000378727 PRR20DP86480 221 aa13.79□□□□□ -0.2
THUMPD2-201ENST00000378727 PRR20BP86481 221 aa13.79□□□□□ -0.2
THUMPD2-201ENST00000378727 PRR20AP86496 221 aa13.79□□□□□ -0.2
THUMPD2-201ENST00000378727 DEFA5Q01523 94 aa13.79□□□□□ -0.2
THUMPD2-201ENST00000378727 MRPL36Q9P0J6 103 aaKnown RBP13.79□□□□□ -0.2
THUMPD2-201ENST00000378727 SLC45A2Q9UMX9 530 aa13.79□□□□□ -0.2
THUMPD2-201ENST00000378727 NCBP2LA6PVI3 153 aaKnown RBP13.78□□□□□ -0.2
THUMPD2-201ENST00000378727 SEC14L6B5MCN3 397 aa13.78□□□□□ -0.2
THUMPD2-201ENST00000378727 CYB5BO43169 146 aa13.78□□□□□ -0.2
THUMPD2-201ENST00000378727 IGHV3-48P01763 117 aa13.78□□□□□ -0.2
THUMPD2-201ENST00000378727 LINC00869P0C866 280 aa13.78□□□□□ -0.2
THUMPD2-201ENST00000378727 FAM106CPP0CH98 169 aa13.78□□□□□ -0.2
THUMPD2-201ENST00000378727 B2MP61769 119 aa13.78□□□□□ -0.2
THUMPD2-201ENST00000378727 RAB31Q13636 194 aa13.78□□□□□ -0.2
THUMPD2-201ENST00000378727 ICAM4Q14773 271 aa13.78□□□□□ -0.2
THUMPD2-201ENST00000378727 FXYD3Q14802 87 aa13.78□□□□□ -0.2
THUMPD2-201ENST00000378727 OR1P1Q8NH06 330 aa13.78□□□□□ -0.2
THUMPD2-201ENST00000378727 SLC35E1Q96K37 410 aa13.78□□□□□ -0.2
THUMPD2-201ENST00000378727 KCNIP2Q9NS61 270 aa13.78□□□□□ -0.2
THUMPD2-201ENST00000378727 GNG13Q9P2W3 67 aa13.78□□□□□ -0.2
THUMPD2-201ENST00000378727 F11RQ9Y624 299 aaKnown RBP13.78□□□□□ -0.2
THUMPD2-201ENST00000378727 OR10J1P30954 320 aa13.78□□□□□ -0.2
THUMPD2-201ENST00000378727 BRS3P32247 399 aa13.78□□□□□ -0.2
THUMPD2-201ENST00000378727 ZNF506Q5JVG8 444 aa13.78□□□□□ -0.2
THUMPD2-201ENST00000378727 BRD3OSQ6XYD6 125 aa13.78□□□□□ -0.2
THUMPD2-201ENST00000378727 ACY3Q96HD9 319 aa13.78□□□□□ -0.2
THUMPD2-201ENST00000378727 SRSF8Q9BRL6 282 aaKnown RBP13.78□□□□□ -0.2
THUMPD2-201ENST00000378727 FAM103A1Q9BTL3 118 aaKnown RBP13.78□□□□□ -0.2
THUMPD2-201ENST00000378727 C7orf69Q9H7B7 122 aa13.78□□□□□ -0.2
THUMPD2-201ENST00000378727 BEX4Q9NWD9 120 aaPredicted RBP13.78□□□□□ -0.2
THUMPD2-201ENST00000378727 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.77□□□□□ -0.24e-10■■■■■ 34.9
THUMPD2-201ENST00000378727 CELSR1Q9NYQ6 3014 aa13.77□□□□□ -0.21
THUMPD2-201ENST00000378727 CRYGCP07315 174 aa13.77□□□□□ -0.21
THUMPD2-201ENST00000378727 IGHV4-38-2P0DP08 117 aa13.77□□□□□ -0.21
THUMPD2-201ENST00000378727 CDC34P49427 236 aaPredicted RBP13.77□□□□□ -0.21
THUMPD2-201ENST00000378727 DEFB113Q30KQ7 82 aa13.77□□□□□ -0.21
THUMPD2-201ENST00000378727 MISP3Q96FF7 219 aa13.77□□□□□ -0.21
THUMPD2-201ENST00000378727 SMDT1Q9H4I9 107 aa13.77□□□□□ -0.21
THUMPD2-201ENST00000378727 HIF1ANQ9NWT6 349 aa13.77□□□□□ -0.21
THUMPD2-201ENST00000378727 CSMD1Q96PZ7 3565 aa13.76□□□□□ -0.21
THUMPD2-201ENST00000378727 LOC102723971A0A1B0GUV8 181 aa13.76□□□□□ -0.21
THUMPD2-201ENST00000378727 CX3CL1P78423 397 aa13.76□□□□□ -0.21
THUMPD2-201ENST00000378727 Q8N9W7 124 aa13.76□□□□□ -0.21
THUMPD2-201ENST00000378727 SLC35B3Q9H1N7 401 aa13.76□□□□□ -0.21
THUMPD2-201ENST00000378727 TMPRSS5Q9H3S3 457 aa13.76□□□□□ -0.21
THUMPD2-201ENST00000378727 ZFP92A6NM28 416 aa13.76□□□□□ -0.21
THUMPD2-201ENST00000378727 GATA2P23769 480 aaPredicted RBP13.76□□□□□ -0.21
THUMPD2-201ENST00000378727 NDPQ00604 133 aa13.76□□□□□ -0.21
THUMPD2-201ENST00000378727 ZNF562Q6V9R5 426 aa13.76□□□□□ -0.21
THUMPD2-201ENST00000378727 RXFP4Q8TDU9 374 aa13.76□□□□□ -0.21
THUMPD2-201ENST00000378727 ABHD5Q8WTS1 349 aa13.76□□□□□ -0.21
THUMPD2-201ENST00000378727 NPIPB3Q92617 1050 aa13.76□□□□□ -0.21
THUMPD2-201ENST00000378727 ABCA1O95477 2261 aa13.75□□□□□ -0.21
THUMPD2-201ENST00000378727 AVPP01185 164 aa13.75□□□□□ -0.21
THUMPD2-201ENST00000378727 BCL2P10415 239 aa13.75□□□□□ -0.21
THUMPD2-201ENST00000378727 CTRB1P17538 263 aa13.75□□□□□ -0.21
THUMPD2-201ENST00000378727 PMS2P11Q13670 270 aa13.75□□□□□ -0.21
THUMPD2-201ENST00000378727 HIST2H2BCQ6DN03 193 aa13.75□□□□□ -0.21
THUMPD2-201ENST00000378727 CTRB2Q6GPI1 263 aa13.75□□□□□ -0.21
THUMPD2-201ENST00000378727 PSMG3-AS1Q96PY0 264 aa13.75□□□□□ -0.21
THUMPD2-201ENST00000378727 SLC25A33Q9BSK2 321 aa13.75□□□□□ -0.21
THUMPD2-201ENST00000378727 IGKV1D-37A0A075B6S9 117 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms