RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 CORTO00230 105 aa14.78□□□□□ -0.04
HLA-DRB1-201ENST00000360004 OVOL1O14753 267 aa14.78□□□□□ -0.04
HLA-DRB1-201ENST00000360004 PRAF2O60831 178 aa14.78□□□□□ -0.04
HLA-DRB1-201ENST00000360004 SCGB1D2O95969 90 aa14.78□□□□□ -0.04
HLA-DRB1-201ENST00000360004 IL5P05113 134 aa14.78□□□□□ -0.04
HLA-DRB1-201ENST00000360004 IGLL1P15814 213 aa14.78□□□□□ -0.04
HLA-DRB1-201ENST00000360004 HOXD3P31249 432 aaPredicted RBP14.78□□□□□ -0.04
HLA-DRB1-201ENST00000360004 IAH1Q2TAA2 248 aaPredicted RBP14.78□□□□□ -0.04
HLA-DRB1-201ENST00000360004 Q56UQ5 140 aa14.78□□□□□ -0.04
HLA-DRB1-201ENST00000360004 SLC24A4Q8NFF2 622 aa14.78□□□□□ -0.04
HLA-DRB1-201ENST00000360004 DCUN1D4Q92564 292 aa14.78□□□□□ -0.04
HLA-DRB1-201ENST00000360004 PALMDQ9NP74 551 aa14.78□□□□□ -0.04
HLA-DRB1-201ENST00000360004 C21orf62Q9NYP8 219 aa14.78□□□□□ -0.04
HLA-DRB1-201ENST00000360004 GSKIPQ9P0R6 139 aa14.78□□□□□ -0.04
HLA-DRB1-201ENST00000360004 PAIP2BQ9ULR5 123 aaKnown RBP14.78□□□□□ -0.04
HLA-DRB1-201ENST00000360004 WNK1Q9H4A3 2382 aa14.78□□□□□ -0.04
HLA-DRB1-201ENST00000360004 FAM90A26D6RGX4 464 aa14.77□□□□□ -0.05
HLA-DRB1-201ENST00000360004 PPP5D1E7EU14 171 aa14.77□□□□□ -0.05
HLA-DRB1-201ENST00000360004 TRBV12-3P01733 135 aa14.77□□□□□ -0.05
HLA-DRB1-201ENST00000360004 GPR183P32249 361 aa14.77□□□□□ -0.05
HLA-DRB1-201ENST00000360004 MFAP2P55001 183 aa14.77□□□□□ -0.05
HLA-DRB1-201ENST00000360004 PDLIM3Q53GG5 364 aaPredicted RBP14.77□□□□□ -0.05
HLA-DRB1-201ENST00000360004 WFDC9Q8NEX5 89 aa14.77□□□□□ -0.05
HLA-DRB1-201ENST00000360004 DMRT1Q9Y5R6 373 aa14.77□□□□□ -0.05
HLA-DRB1-201ENST00000360004 SEC14L6B5MCN3 397 aa14.76□□□□□ -0.05
HLA-DRB1-201ENST00000360004 CCSO14618 274 aa14.76□□□□□ -0.05
HLA-DRB1-201ENST00000360004 GGCTO75223 188 aaKnown RBP14.76□□□□□ -0.05
HLA-DRB1-201ENST00000360004 PTTG1O95997 202 aa14.76□□□□□ -0.05
HLA-DRB1-201ENST00000360004 MT-CO2P00403 227 aa14.76□□□□□ -0.05
HLA-DRB1-201ENST00000360004 CLEC3BP05452 202 aa14.76□□□□□ -0.05
HLA-DRB1-201ENST00000360004 RNASE2P10153 161 aaKnown RBP14.76□□□□□ -0.05
HLA-DRB1-201ENST00000360004 IAPPP10997 89 aa14.76□□□□□ -0.05
HLA-DRB1-201ENST00000360004 NPY1RP25929 384 aa14.76□□□□□ -0.05
HLA-DRB1-201ENST00000360004 OPRK1P41145 380 aa14.76□□□□□ -0.05
HLA-DRB1-201ENST00000360004 KLK9Q2XQG4 91 aa14.76□□□□□ -0.05
HLA-DRB1-201ENST00000360004 DLX4Q92988 240 aaPredicted RBP14.76□□□□□ -0.05
HLA-DRB1-201ENST00000360004 ELOVL1Q9BW60 279 aa14.76□□□□□ -0.05
HLA-DRB1-201ENST00000360004 MAGT1Q9H0U3 335 aa14.76□□□□□ -0.05
HLA-DRB1-201ENST00000360004 ZC4H2Q9NQZ6 224 aa14.76□□□□□ -0.05
HLA-DRB1-201ENST00000360004 GAR1Q9NY12 217 aaKnown RBP14.76□□□□□ -0.05
HLA-DRB1-201ENST00000360004 KLK9Q9UKQ9 250 aa14.76□□□□□ -0.05
HLA-DRB1-201ENST00000360004 RPS10-NUDT3A0A1W2PQS6 291 aa14.75□□□□□ -0.05
HLA-DRB1-201ENST00000360004 NKX2-1P43699 371 aaPredicted RBP14.75□□□□□ -0.05
HLA-DRB1-201ENST00000360004 MFAP4P55083 255 aa14.75□□□□□ -0.05
HLA-DRB1-201ENST00000360004 RPP30P78346 268 aaKnown RBP14.75□□□□□ -0.05
HLA-DRB1-201ENST00000360004 DCTN2Q13561 401 aaKnown RBP14.75□□□□□ -0.05
HLA-DRB1-201ENST00000360004 ACSM6Q6P461 480 aa14.75□□□□□ -0.05
HLA-DRB1-201ENST00000360004 C1QL4Q86Z23 238 aa14.75□□□□□ -0.05
HLA-DRB1-201ENST00000360004 ZNF502Q8TBZ5 544 aa14.75□□□□□ -0.05
HLA-DRB1-201ENST00000360004 SCARB1Q8WTV0 552 aa14.75□□□□□ -0.05
HLA-DRB1-201ENST00000360004 CCDC140Q96MF4 163 aa14.75□□□□□ -0.05
HLA-DRB1-201ENST00000360004 CIB3Q96Q77 187 aaPredicted RBP14.75□□□□□ -0.05
HLA-DRB1-201ENST00000360004 U3KQ87 197 aa14.75□□□□□ -0.05
HLA-DRB1-201ENST00000360004 VWFP04275 2813 aa14.74□□□□□ -0.05
HLA-DRB1-201ENST00000360004 OR2T8A6NH00 312 aa14.74□□□□□ -0.05
HLA-DRB1-201ENST00000360004 MPTX1A8MV57 137 aa14.74□□□□□ -0.05
HLA-DRB1-201ENST00000360004 BMPR1BO00238 502 aa14.74□□□□□ -0.05
HLA-DRB1-201ENST00000360004 SYNGR2O43760 224 aa14.74□□□□□ -0.05
HLA-DRB1-201ENST00000360004 PITX3O75364 302 aa14.74□□□□□ -0.05
HLA-DRB1-201ENST00000360004 SCGB2A1O75556 95 aa14.74□□□□□ -0.05
HLA-DRB1-201ENST00000360004 IFNA4P05014 189 aa14.74□□□□□ -0.05
HLA-DRB1-201ENST00000360004 SYNJ2BPP57105 145 aa14.74□□□□□ -0.05
HLA-DRB1-201ENST00000360004 OXLD1Q5BKU9 147 aa14.74□□□□□ -0.05
HLA-DRB1-201ENST00000360004 C9orf66Q5T8R8 295 aa14.74□□□□□ -0.05
HLA-DRB1-201ENST00000360004 GSG1LQ6UXU4 331 aa14.74□□□□□ -0.05
HLA-DRB1-201ENST00000360004 MARVELD1Q9BSK0 173 aa14.74□□□□□ -0.05
HLA-DRB1-201ENST00000360004 SNRPGP15A8MWD9 76 aa14.73□□□□□ -0.05
HLA-DRB1-201ENST00000360004 G3V4G9 280 aa14.73□□□□□ -0.05
HLA-DRB1-201ENST00000360004 K7EIM0 57 aa14.73□□□□□ -0.05
HLA-DRB1-201ENST00000360004 SSNA1O43805 119 aa14.73□□□□□ -0.05
HLA-DRB1-201ENST00000360004 GNG7O60262 68 aa14.73□□□□□ -0.05
HLA-DRB1-201ENST00000360004 SAP30O75446 220 aa14.73□□□□□ -0.05
HLA-DRB1-201ENST00000360004 IGHV3-48P01763 117 aa14.73□□□□□ -0.05
HLA-DRB1-201ENST00000360004 RAB11AP62491 216 aa14.73□□□□□ -0.05
HLA-DRB1-201ENST00000360004 FAM106AQ4KMX7 169 aa14.73□□□□□ -0.05
HLA-DRB1-201ENST00000360004 C2orf83Q53S99 150 aa14.73□□□□□ -0.05
HLA-DRB1-201ENST00000360004 ZBTB8BQ8NAP8 495 aaPredicted RBP14.73□□□□□ -0.05
HLA-DRB1-201ENST00000360004 BSCL2Q96G97 398 aaPredicted RBP14.73□□□□□ -0.05
HLA-DRB1-201ENST00000360004 OR4C12Q96R67 309 aa14.73□□□□□ -0.05
HLA-DRB1-201ENST00000360004 ZNF320A2RRD8 509 aa14.72□□□□□ -0.05
HLA-DRB1-201ENST00000360004 I3L2K1 104 aa14.72□□□□□ -0.05
HLA-DRB1-201ENST00000360004 TGOLN2O43493 480 aa14.72□□□□□ -0.05
HLA-DRB1-201ENST00000360004 OR2C1O95371 312 aa14.72□□□□□ -0.05
HLA-DRB1-201ENST00000360004 LY86O95711 162 aa14.72□□□□□ -0.05
HLA-DRB1-201ENST00000360004 SPNP16150 400 aa14.72□□□□□ -0.05
HLA-DRB1-201ENST00000360004 NPBWR1P48145 328 aa14.72□□□□□ -0.05
HLA-DRB1-201ENST00000360004 RGS21Q2M5E4 152 aa14.72□□□□□ -0.05
HLA-DRB1-201ENST00000360004 OR10C1Q96KK4 312 aa14.72□□□□□ -0.05
HLA-DRB1-201ENST00000360004 PEMTQ9UBM1 199 aa14.72□□□□□ -0.05
HLA-DRB1-201ENST00000360004 MGAM2Q2M2H8 2515 aa14.72□□□□□ -0.05
HLA-DRB1-201ENST00000360004 PKD1L1Q8TDX9 2849 aa14.71□□□□□ -0.05
HLA-DRB1-201ENST00000360004 NUPL2O15504 423 aaKnown RBP14.71□□□□□ -0.05
HLA-DRB1-201ENST00000360004 SSSCA1O60232 199 aa14.71□□□□□ -0.05
HLA-DRB1-201ENST00000360004 ATP5IP56385 69 aaPredicted RBP14.71□□□□□ -0.05
HLA-DRB1-201ENST00000360004 POLR2GP62487 172 aaKnown RBP eCLIP14.71□□□□□ -0.05
HLA-DRB1-201ENST00000360004 KLF5Q13887 457 aaPredicted RBP14.71□□□□□ -0.05
HLA-DRB1-201ENST00000360004 ETFRF1Q6IPR1 90 aa14.71□□□□□ -0.05
HLA-DRB1-201ENST00000360004 C11orf87Q6NUJ2 197 aa14.71□□□□□ -0.05
HLA-DRB1-201ENST00000360004 SPSB3Q6PJ21 355 aa14.71□□□□□ -0.05
HLA-DRB1-201ENST00000360004 RNASEH2CQ8TDP1 164 aaKnown RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms