RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 PPOXP50336 477 aa13.61□□□□□ -0.23
CDC42EP4-201ENST00000335793 TRIP6Q15654 476 aaKnown RBP13.61□□□□□ -0.23
CDC42EP4-201ENST00000335793 ITLN1Q8WWA0 313 aa13.61□□□□□ -0.23
CDC42EP4-201ENST00000335793 TNRC6BQ9UPQ9 1833 aaKnown RBP13.61□□□□□ -0.23
CDC42EP4-201ENST00000335793 MGST1P10620 155 aaKnown RBP13.61□□□□□ -0.23
CDC42EP4-201ENST00000335793 TCL1AP56279 114 aa13.61□□□□□ -0.23
CDC42EP4-201ENST00000335793 LINC00310P59036 64 aa13.61□□□□□ -0.23
CDC42EP4-201ENST00000335793 EIF4EBP1Q13541 118 aaPredicted RBP13.61□□□□□ -0.23
CDC42EP4-201ENST00000335793 UTF1Q5T230 341 aa13.61□□□□□ -0.23
CDC42EP4-201ENST00000335793 DCHS1Q96JQ0 3298 aa13.6□□□□□ -0.23
CDC42EP4-201ENST00000335793 CA2P00918 260 aa13.6□□□□□ -0.23
CDC42EP4-201ENST00000335793 CGAP01215 116 aa13.6□□□□□ -0.23
CDC42EP4-201ENST00000335793 IGFBP2P18065 325 aa13.6□□□□□ -0.23
CDC42EP4-201ENST00000335793 GCHFRP30047 84 aa13.6□□□□□ -0.23
CDC42EP4-201ENST00000335793 GCSAMQ8N6F7 178 aa13.6□□□□□ -0.23
CDC42EP4-201ENST00000335793 RND1Q92730 232 aa13.6□□□□□ -0.23
CDC42EP4-201ENST00000335793 YTHDF2Q9Y5A9 579 aaKnown RBP13.6□□□□□ -0.23
CDC42EP4-201ENST00000335793 ACACAQ13085 2346 aa13.6□□□□□ -0.23
CDC42EP4-201ENST00000335793 TRBV20OR9-2A0A075B6H5 130 aa13.6□□□□□ -0.23
CDC42EP4-201ENST00000335793 TRAV17A0A0B4J275 112 aa13.6□□□□□ -0.23
CDC42EP4-201ENST00000335793 OR10J4P0C629 311 aa13.6□□□□□ -0.23
CDC42EP4-201ENST00000335793 STAG3L2P0CL84 134 aa13.6□□□□□ -0.23
CDC42EP4-201ENST00000335793 STAG3L3P0CL85 134 aa13.6□□□□□ -0.23
CDC42EP4-201ENST00000335793 SELENOVP59797 346 aa13.6□□□□□ -0.23
CDC42EP4-201ENST00000335793 SPRNQ5BIV9 151 aa13.6□□□□□ -0.23
CDC42EP4-201ENST00000335793 Q8TCH9 128 aa13.6□□□□□ -0.23
CDC42EP4-201ENST00000335793 MMP23AO75900 390 aa13.59□□□□□ -0.23
CDC42EP4-201ENST00000335793 SMAGPQ0VAQ4 97 aa13.59□□□□□ -0.23
CDC42EP4-201ENST00000335793 VWC2Q2TAL6 325 aa13.59□□□□□ -0.23
CDC42EP4-201ENST00000335793 NRN1Q9NPD7 142 aa13.59□□□□□ -0.23
CDC42EP4-201ENST00000335793 PRR33A8MZF0 331 aa13.59□□□□□ -0.23
CDC42EP4-201ENST00000335793 EFNB3Q15768 340 aa13.59□□□□□ -0.23
CDC42EP4-201ENST00000335793 TRGV10A0A0A0MS01 117 aa13.59□□□□□ -0.23
CDC42EP4-201ENST00000335793 NBEAP1P0C6P0 100 aa13.59□□□□□ -0.23
CDC42EP4-201ENST00000335793 RPL15P61313 204 aaKnown RBP13.59□□□□□ -0.23
CDC42EP4-201ENST00000335793 PAFAH1B2P68402 229 aa13.59□□□□□ -0.23
CDC42EP4-201ENST00000335793 Q56UQ5 140 aa13.59□□□□□ -0.23
CDC42EP4-201ENST00000335793 PRR31Q5SQ13 230 aa13.59□□□□□ -0.23
CDC42EP4-201ENST00000335793 GTSF1LQ9H1H1 148 aa13.59□□□□□ -0.23
CDC42EP4-201ENST00000335793 ZFHX4Q86UP3 3567 aa13.58□□□□□ -0.23
CDC42EP4-201ENST00000335793 SRRM5B3KS81 715 aa13.58□□□□□ -0.24
CDC42EP4-201ENST00000335793 J3QR06 171 aa13.58□□□□□ -0.24
CDC42EP4-201ENST00000335793 CORTO00230 105 aa13.58□□□□□ -0.24
CDC42EP4-201ENST00000335793 CRYBB3P26998 211 aa13.58□□□□□ -0.24
CDC42EP4-201ENST00000335793 HSPE1P61604 102 aaKnown RBP13.58□□□□□ -0.24
CDC42EP4-201ENST00000335793 MOB3BQ86TA1 216 aa13.58□□□□□ -0.24
CDC42EP4-201ENST00000335793 ELOVL5Q9NYP7 299 aa13.58□□□□□ -0.24
CDC42EP4-201ENST00000335793 SNURFLB1AK76 121 aa13.58□□□□□ -0.24
CDC42EP4-201ENST00000335793 TIMP3P35625 211 aa13.58□□□□□ -0.24
CDC42EP4-201ENST00000335793 HLA-DRB5Q30154 266 aa13.58□□□□□ -0.24
CDC42EP4-201ENST00000335793 SAMD13Q5VXD3 122 aa13.58□□□□□ -0.24
CDC42EP4-201ENST00000335793 DUX4L9Q6RFH8 374 aaPredicted RBP13.58□□□□□ -0.24
CDC42EP4-201ENST00000335793 MIR17HGQ75NE6 70 aa13.58□□□□□ -0.24
CDC42EP4-201ENST00000335793 CCL13Q99616 98 aa13.58□□□□□ -0.24
CDC42EP4-201ENST00000335793 OR51B2Q9Y5P1 312 aa13.58□□□□□ -0.24
CDC42EP4-201ENST00000335793 SPTA1P02549 2419 aa13.58□□□□□ -0.24
CDC42EP4-201ENST00000335793 SAA2-SAA4A0A096LPE2 208 aa13.58□□□□□ -0.24
CDC42EP4-201ENST00000335793 SPAARA0A1B0GVQ0 90 aa13.58□□□□□ -0.24
CDC42EP4-201ENST00000335793 DPRXA6NFQ7 191 aa13.58□□□□□ -0.24
CDC42EP4-201ENST00000335793 SAA2P0DJI9 122 aaPredicted RBP13.58□□□□□ -0.24
CDC42EP4-201ENST00000335793 FXYD3Q14802 87 aa13.58□□□□□ -0.24
CDC42EP4-201ENST00000335793 DOLPP1Q86YN1 238 aa13.58□□□□□ -0.24
CDC42EP4-201ENST00000335793 OR8I2Q8N0Y5 310 aa13.58□□□□□ -0.24
CDC42EP4-201ENST00000335793 MRPL18Q9H0U6 180 aaKnown RBP13.58□□□□□ -0.24
CDC42EP4-201ENST00000335793 IFI27L2Q9H2X8 130 aa13.58□□□□□ -0.24
CDC42EP4-201ENST00000335793 NUDT3O95989 172 aa13.57□□□□□ -0.24
CDC42EP4-201ENST00000335793 VDAC2P45880 294 aaPredicted RBP13.57□□□□□ -0.24
CDC42EP4-201ENST00000335793 GNG4P50150 75 aa13.57□□□□□ -0.24
CDC42EP4-201ENST00000335793 CT45A1Q5HYN5 189 aa13.57□□□□□ -0.24
CDC42EP4-201ENST00000335793 CT45A3Q8NHU0 189 aa13.57□□□□□ -0.24
CDC42EP4-201ENST00000335793 RAB1CQ92928 201 aa13.57□□□□□ -0.24
CDC42EP4-201ENST00000335793 ZNRD1Q9P1U0 126 aa13.57□□□□□ -0.24
CDC42EP4-201ENST00000335793 HELTA6NFD8 242 aa13.57□□□□□ -0.24
CDC42EP4-201ENST00000335793 CD99P14209 185 aa13.57□□□□□ -0.24
CDC42EP4-201ENST00000335793 DEFB124Q8NES8 71 aa13.57□□□□□ -0.24
CDC42EP4-201ENST00000335793 TMEM186Q96B77 213 aa13.57□□□□□ -0.24
CDC42EP4-201ENST00000335793 NAT8BQ9UHF3 227 aa13.57□□□□□ -0.24
CDC42EP4-201ENST00000335793 KMT2EQ8IZD2 1858 aa13.56□□□□□ -0.24
CDC42EP4-201ENST00000335793 TYMSP04818 313 aa13.56□□□□□ -0.24
CDC42EP4-201ENST00000335793 FOXL1Q12952 345 aa13.56□□□□□ -0.24
CDC42EP4-201ENST00000335793 PQLC2Q6ZP29 291 aa13.56□□□□□ -0.24
CDC42EP4-201ENST00000335793 Q8N7P7 452 aa13.56□□□□□ -0.24
CDC42EP4-201ENST00000335793 LAMA5O15230 3695 aa13.56□□□□□ -0.24
CDC42EP4-201ENST00000335793 TMPRSS2O15393 492 aa13.56□□□□□ -0.24
CDC42EP4-201ENST00000335793 MLANAQ16655 118 aa13.56□□□□□ -0.24
CDC42EP4-201ENST00000335793 ZNF841Q6ZN19 808 aa13.56□□□□□ -0.24
CDC42EP4-201ENST00000335793 CFAP47Q6ZTR5 3102 aa13.56□□□□□ -0.24
CDC42EP4-201ENST00000335793 PIEZO2Q9H5I5 2752 aa13.56□□□□□ -0.24
CDC42EP4-201ENST00000335793 IGHV3-48P01763 117 aa13.56□□□□□ -0.24
CDC42EP4-201ENST00000335793 CTRLP40313 264 aa13.56□□□□□ -0.24
CDC42EP4-201ENST00000335793 MSMPQ1L6U9 139 aa13.56□□□□□ -0.24
CDC42EP4-201ENST00000335793 TIGITQ495A1 244 aa13.56□□□□□ -0.24
CDC42EP4-201ENST00000335793 CFAP161Q6P656 301 aa13.56□□□□□ -0.24
CDC42EP4-201ENST00000335793 ZNF71Q9NQZ8 489 aaPredicted RBP13.56□□□□□ -0.24
CDC42EP4-201ENST00000335793 PIEZO1Q92508 2521 aa13.55□□□□□ -0.24
CDC42EP4-201ENST00000335793 C15orf61A6NNL5 157 aa13.55□□□□□ -0.24
CDC42EP4-201ENST00000335793 KLHDC1Q8N7A1 406 aa13.55□□□□□ -0.24
CDC42EP4-201ENST00000335793 MUC21A0A0G2JKD1 596 aa13.55□□□□□ -0.24
CDC42EP4-201ENST00000335793 MUC21A0A140T8X8 626 aa13.55□□□□□ -0.24
CDC42EP4-201ENST00000335793 REG1BP48304 166 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms