RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 F11RQ9Y624 299 aaKnown RBP12.78□□□□□ -0.36
SSBP4-213ENST00000602088 SORL1Q92673 2214 aa12.78□□□□□ -0.36
SSBP4-213ENST00000602088 TRBV7-1A0A0A6YYK4 115 aa12.77□□□□□ -0.37
SSBP4-213ENST00000602088 A0A0G2JRQ6 117 aa12.77□□□□□ -0.37
SSBP4-213ENST00000602088 CYB5BO43169 146 aa12.77□□□□□ -0.37
SSBP4-213ENST00000602088 GGCTO75223 188 aaKnown RBP12.77□□□□□ -0.37
SSBP4-213ENST00000602088 MECP2P51608 486 aaKnown RBP12.77□□□□□ -0.37
SSBP4-213ENST00000602088 MFAP2P55001 183 aa12.77□□□□□ -0.37
SSBP4-213ENST00000602088 PRCDQ00LT1 54 aa12.77□□□□□ -0.37
SSBP4-213ENST00000602088 DHODHQ02127 395 aa12.77□□□□□ -0.37
SSBP4-213ENST00000602088 SLC25A24Q6NUK1 477 aa12.77□□□□□ -0.37
SSBP4-213ENST00000602088 CLEC19AQ6UXS0 136 aa12.77□□□□□ -0.37
SSBP4-213ENST00000602088 SGPP2Q8IWX5 399 aa12.77□□□□□ -0.37
SSBP4-213ENST00000602088 LHFPL5Q8TAF8 219 aa12.77□□□□□ -0.37
SSBP4-213ENST00000602088 RRNAD1Q96FB5 475 aaKnown RBP12.77□□□□□ -0.37
SSBP4-213ENST00000602088 PRR25Q96S07 402 aa12.77□□□□□ -0.37
SSBP4-213ENST00000602088 OR2C1O95371 312 aa12.76□□□□□ -0.37
SSBP4-213ENST00000602088 IGLV1-51P01701 117 aa12.76□□□□□ -0.37
SSBP4-213ENST00000602088 HLA-AP01891 365 aaKnown RBP12.76□□□□□ -0.37
SSBP4-213ENST00000602088 ARL3P36405 182 aa12.76□□□□□ -0.37
SSBP4-213ENST00000602088 SELENOHQ8IZQ5 122 aaKnown RBP12.76□□□□□ -0.37
SSBP4-213ENST00000602088 OR1L6Q8NGR2 347 aa12.76□□□□□ -0.37
SSBP4-213ENST00000602088 ZNF502Q8TBZ5 544 aa12.76□□□□□ -0.37
SSBP4-213ENST00000602088 VN1R17PQ8TDU5 208 aa12.76□□□□□ -0.37
SSBP4-213ENST00000602088 RBPMSQ93062 196 aaKnown RBP12.76□□□□□ -0.37
SSBP4-213ENST00000602088 GALNT14Q96FL9 552 aa12.76□□□□□ -0.37
SSBP4-213ENST00000602088 SIGLEC8Q9NYZ4 499 aa12.76□□□□□ -0.37
SSBP4-213ENST00000602088 KCNIP3Q9Y2W7 256 aa12.76□□□□□ -0.37
SSBP4-213ENST00000602088 COL7A1Q02388 2944 aa12.76□□□□□ -0.37
SSBP4-213ENST00000602088 CLEC3BP05452 202 aa12.75□□□□□ -0.37
SSBP4-213ENST00000602088 CSN3P07498 182 aa12.75□□□□□ -0.37
SSBP4-213ENST00000602088 BAK1Q16611 211 aa12.75□□□□□ -0.37
SSBP4-213ENST00000602088 Q6ZRM9 215 aa12.75□□□□□ -0.37
SSBP4-213ENST00000602088 FAM219AQ8IW50 185 aa12.75□□□□□ -0.37
SSBP4-213ENST00000602088 OR2C3Q8N628 320 aa12.75□□□□□ -0.37
SSBP4-213ENST00000602088 OR1P1Q8NH06 330 aa12.75□□□□□ -0.37
SSBP4-213ENST00000602088 TMEM56-RWDD3S4R434 201 aa12.75□□□□□ -0.37
SSBP4-213ENST00000602088 ST8SIA3O43173 380 aa12.74□□□□□ -0.37
SSBP4-213ENST00000602088 SPNP16150 400 aa12.74□□□□□ -0.37
SSBP4-213ENST00000602088 AKR1C4P17516 323 aa12.74□□□□□ -0.37
SSBP4-213ENST00000602088 SUPT4H1P63272 117 aaKnown RBP12.74□□□□□ -0.37
SSBP4-213ENST00000602088 TMEM187Q14656 261 aa12.74□□□□□ -0.37
SSBP4-213ENST00000602088 TMEM268Q5VZI3 342 aa12.74□□□□□ -0.37
SSBP4-213ENST00000602088 ZNF57Q68EA5 555 aaPredicted RBP12.74□□□□□ -0.37
SSBP4-213ENST00000602088 GPHB5Q86YW7 130 aa12.74□□□□□ -0.37
SSBP4-213ENST00000602088 RNASE11Q8TAA1 199 aaKnown RBP12.74□□□□□ -0.37
SSBP4-213ENST00000602088 SDHCQ99643 169 aaPredicted RBP12.74□□□□□ -0.37
SSBP4-213ENST00000602088 PEMTQ9UBM1 199 aa12.74□□□□□ -0.37
SSBP4-213ENST00000602088 LSM4Q9Y4Z0 139 aaKnown RBP12.74□□□□□ -0.37
SSBP4-213ENST00000602088 INS-IGF2F8WCM5 200 aa12.73□□□□□ -0.37
SSBP4-213ENST00000602088 LGALS9O00182 355 aa12.73□□□□□ -0.37
SSBP4-213ENST00000602088 LY86O95711 162 aa12.73□□□□□ -0.37
SSBP4-213ENST00000602088 IFNA17P01571 189 aa12.73□□□□□ -0.37
SSBP4-213ENST00000602088 ERHP84090 104 aaKnown RBP12.73□□□□□ -0.37
SSBP4-213ENST00000602088 DCTN2Q13561 401 aaKnown RBP12.73□□□□□ -0.37
SSBP4-213ENST00000602088 AARDQ4LEZ3 155 aa12.73□□□□□ -0.37
SSBP4-213ENST00000602088 SPINK9Q5DT21 86 aa12.73□□□□□ -0.37
SSBP4-213ENST00000602088 HAPLN4Q86UW8 402 aa12.73□□□□□ -0.37
SSBP4-213ENST00000602088 ZNF114Q8NC26 417 aa12.73□□□□□ -0.37
SSBP4-213ENST00000602088 IL22RA2Q969J5 263 aa12.73□□□□□ -0.37
SSBP4-213ENST00000602088 SLC25A21Q9BQT8 299 aaPredicted RBP12.73□□□□□ -0.37
SSBP4-213ENST00000602088 PLEKHA3Q9HB20 300 aa12.73□□□□□ -0.37
SSBP4-213ENST00000602088 K7EIM0 57 aa12.72□□□□□ -0.37
SSBP4-213ENST00000602088 GPR183P32249 361 aa12.72□□□□□ -0.37
SSBP4-213ENST00000602088 FAM106AQ4KMX7 169 aa12.72□□□□□ -0.37
SSBP4-213ENST00000602088 TRIQKQ629K1 86 aa12.72□□□□□ -0.37
SSBP4-213ENST00000602088 ADAMTSL5Q6ZMM2 481 aa12.72□□□□□ -0.37
SSBP4-213ENST00000602088 SLC35G3Q8N808 338 aa12.72□□□□□ -0.37
SSBP4-213ENST00000602088 SCARB1Q8WTV0 552 aa12.72□□□□□ -0.37
SSBP4-213ENST00000602088 GPR146Q96CH1 333 aa12.72□□□□□ -0.37
SSBP4-213ENST00000602088 ATP6V0BQ99437 205 aa12.72□□□□□ -0.37
SSBP4-213ENST00000602088 PDCD10Q9BUL8 212 aa12.72□□□□□ -0.37
SSBP4-213ENST00000602088 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.72□□□□□ -0.37
SSBP4-213ENST00000602088 IGHV3-21A0A0B4J1V1 117 aa12.71□□□□□ -0.37
SSBP4-213ENST00000602088 TGOLN2O43493 480 aa12.71□□□□□ -0.37
SSBP4-213ENST00000602088 GP9P14770 177 aa12.71□□□□□ -0.37
SSBP4-213ENST00000602088 INPP1P49441 399 aa12.71□□□□□ -0.37
SSBP4-213ENST00000602088 TMEM128Q5BJH2 165 aa12.71□□□□□ -0.37
SSBP4-213ENST00000602088 PLET1Q6UQ28 207 aa12.71□□□□□ -0.37
SSBP4-213ENST00000602088 TMED4Q7Z7H5 227 aa12.71□□□□□ -0.37
SSBP4-213ENST00000602088 ZC4H2Q9NQZ6 224 aa12.71□□□□□ -0.37
SSBP4-213ENST00000602088 C21orf62Q9NYP8 219 aa12.71□□□□□ -0.37
SSBP4-213ENST00000602088 PRR13Q9NZ81 148 aa12.71□□□□□ -0.37
SSBP4-213ENST00000602088 NAP1L6A6NFF2 107 aa12.7□□□□□ -0.38
SSBP4-213ENST00000602088 F8W735 103 aaPredicted RBP12.7□□□□□ -0.38
SSBP4-213ENST00000602088 I3L2K1 104 aa12.7□□□□□ -0.38
SSBP4-213ENST00000602088 ANXA3P12429 323 aa12.7□□□□□ -0.38
SSBP4-213ENST00000602088 SNCAP37840 140 aa12.7□□□□□ -0.38
SSBP4-213ENST00000602088 OR52E5Q8NH55 327 aa12.7□□□□□ -0.38
SSBP4-213ENST00000602088 MISP3Q96FF7 219 aa12.7□□□□□ -0.38
SSBP4-213ENST00000602088 BSCL2Q96G97 398 aaPredicted RBP12.7□□□□□ -0.38
SSBP4-213ENST00000602088 CACNG5Q9UF02 275 aa12.7□□□□□ -0.38
SSBP4-213ENST00000602088 A0A0B4J2A0 478 aa12.69□□□□□ -0.38
SSBP4-213ENST00000602088 OR2T8A6NH00 312 aa12.69□□□□□ -0.38
SSBP4-213ENST00000602088 A6NHS1 94 aa12.69□□□□□ -0.38
SSBP4-213ENST00000602088 C2orf70A6NJV1 201 aa12.69□□□□□ -0.38
SSBP4-213ENST00000602088 A8MWP6 167 aa12.69□□□□□ -0.38
SSBP4-213ENST00000602088 HOXA1P49639 335 aaPredicted RBP12.69□□□□□ -0.38
SSBP4-213ENST00000602088 CCR6P51684 374 aa12.69□□□□□ -0.38
SSBP4-213ENST00000602088 SPCS3P61009 180 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms