RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 RNF224P0DH78 156 aa5.6□□□□□ -1.51
CNOT1-222ENST00000570139 IGKV1-13P0DP09 117 aa5.6□□□□□ -1.51
CNOT1-222ENST00000570139 SLC25A6P12236 298 aa5.6□□□□□ -1.51
CNOT1-222ENST00000570139 CXCL3P19876 107 aa5.6□□□□□ -1.51
CNOT1-222ENST00000570139 VDAC1P21796 283 aa5.6□□□□□ -1.51
CNOT1-222ENST00000570139 SAA4P35542 130 aa5.6□□□□□ -1.51
CNOT1-222ENST00000570139 PPP1CCP36873 323 aaKnown RBP5.6□□□□□ -1.51
CNOT1-222ENST00000570139 EIF2B2P49770 351 aaKnown RBP5.6□□□□□ -1.51
CNOT1-222ENST00000570139 TMEM187Q14656 261 aa5.6□□□□□ -1.51
CNOT1-222ENST00000570139 SLC9A3R2Q15599 337 aa5.6□□□□□ -1.51
CNOT1-222ENST00000570139 FAM74A3Q4VXF1 159 aa5.6□□□□□ -1.51
CNOT1-222ENST00000570139 FFAR4Q5NUL3 377 aa5.6□□□□□ -1.51
CNOT1-222ENST00000570139 WDR25Q64LD2 544 aaPredicted RBP5.6□□□□□ -1.51
CNOT1-222ENST00000570139 KCNIP4Q6PIL6 250 aa5.6□□□□□ -1.51
CNOT1-222ENST00000570139 CLEC2AQ6UVW9 174 aa5.6□□□□□ -1.51
CNOT1-222ENST00000570139 LYPD2Q6UXB3 125 aa5.6□□□□□ -1.51
CNOT1-222ENST00000570139 SLC25A48Q6ZT89 311 aaKnown RBP5.6□□□□□ -1.51
CNOT1-222ENST00000570139 TCF23Q7RTU1 214 aa5.6□□□□□ -1.51
CNOT1-222ENST00000570139 MOB3BQ86TA1 216 aa5.6□□□□□ -1.51
CNOT1-222ENST00000570139 ZNF695Q8IW36 515 aa5.6□□□□□ -1.51
CNOT1-222ENST00000570139 LINC00311Q8N616 119 aa5.6□□□□□ -1.51
CNOT1-222ENST00000570139 DRAM1Q8N682 238 aa5.6□□□□□ -1.51
CNOT1-222ENST00000570139 LY6G5BQ8NDX9 201 aa5.6□□□□□ -1.51
CNOT1-222ENST00000570139 OR2T35Q8NGX2 323 aa5.6□□□□□ -1.51
CNOT1-222ENST00000570139 ZNF596Q8TC21 504 aa5.6□□□□□ -1.51
CNOT1-222ENST00000570139 RBPMSQ93062 196 aaKnown RBP5.6□□□□□ -1.51
CNOT1-222ENST00000570139 RBM14Q96PK6 669 aaKnown RBP5.6□□□□□ -1.51
CNOT1-222ENST00000570139 AGMATQ9BSE5 352 aa5.6□□□□□ -1.51
CNOT1-222ENST00000570139 METTL8Q9H825 291 aaKnown RBP5.6□□□□□ -1.51
CNOT1-222ENST00000570139 C19orf12Q9NSK7 152 aa5.6□□□□□ -1.51
CNOT1-222ENST00000570139 PRELID3BQ9Y3B1 194 aa5.6□□□□□ -1.51
CNOT1-222ENST00000570139 AMMECR1Q9Y4X0 333 aaPredicted RBP5.6□□□□□ -1.51
CNOT1-222ENST00000570139 LRBAP50851 2863 aa5.6□□□□□ -1.51
CNOT1-222ENST00000570139 MYO18BQ8IUG5 2567 aa5.6□□□□□ -1.51
CNOT1-222ENST00000570139 CACNA1DQ01668 2161 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 RELNP78509 3460 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 DSCAMO60469 2012 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 A0A1B0GW55 424 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 HMSDA8MTL9 139 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 LYNX1G3V0Z9 82 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 ENSAO43768 121 aaKnown RBP5.59□□□□□ -1.51
CNOT1-222ENST00000570139 FOXH1O75593 365 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 IGHV2-5P01817 119 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 DUX4L2P0CJ85 424 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 DUX4L3P0CJ86 424 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 DUX4L4P0CJ87 422 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 DUX4L5P0CJ88 424 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 DUX4L6P0CJ89 424 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 DUX4L7P0CJ90 424 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 IGHV1-8P0DP01 117 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 LYNX1P0DP58 116 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 SLC25A16P16260 332 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 THBS3P49746 956 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 H2BFSP57053 126 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 SEC61GP60059 68 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 EWSR1Q01844 656 aaKnown RBP eCLIP5.59□□□□□ -1.51
CNOT1-222ENST00000570139 ARL16Q0P5N6 197 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 GNMTQ14749 295 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 SMCO1Q147U7 214 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 AVPI1Q5T686 147 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 THOC7Q6I9Y2 204 aaKnown RBP5.59□□□□□ -1.51
CNOT1-222ENST00000570139 DUX4L9Q6RFH8 374 aaPredicted RBP5.59□□□□□ -1.51
CNOT1-222ENST00000570139 ZNF439Q8NDP4 499 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 OR9G1Q8NH87 305 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 RFESDQ8TAC1 157 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 GLYATL2Q8WU03 294 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 LSM10Q969L4 123 aaKnown RBP5.59□□□□□ -1.51
CNOT1-222ENST00000570139 PRAC1Q96KF2 57 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 C18orf12Q96KH6 178 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 C2orf50Q96LR7 162 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 CHRDL1Q9BU40 450 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 TMEM133Q9H2Q1 129 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 TMPRSS5Q9H3S3 457 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 ONECUT1Q9UBC0 465 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 DUX4Q9UBX2 424 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 PSG11Q9UQ72 335 aa5.59□□□□□ -1.51
CNOT1-222ENST00000570139 IGHV3-43A0A0B4J1X8 118 aa5.58□□□□□ -1.52
CNOT1-222ENST00000570139 A0A1B0GUV1 79 aa5.58□□□□□ -1.52
CNOT1-222ENST00000570139 FAM25EA8MYX2 175 aa5.58□□□□□ -1.52
CNOT1-222ENST00000570139 BOLA2-SMG1P6H3BVE0 249 aa5.58□□□□□ -1.52
CNOT1-222ENST00000570139 TOR1AO14656 332 aa5.58□□□□□ -1.52
CNOT1-222ENST00000570139 RLN2P04090 185 aa5.58□□□□□ -1.52
CNOT1-222ENST00000570139 IGHV3-43DP0DP04 118 aa5.58□□□□□ -1.52
CNOT1-222ENST00000570139 SLC25A4P12235 298 aa5.58□□□□□ -1.52
CNOT1-222ENST00000570139 NFYBP25208 207 aa5.58□□□□□ -1.52
CNOT1-222ENST00000570139 ZNF137PP52743 207 aa5.58□□□□□ -1.52
CNOT1-222ENST00000570139 ATP5J2P56134 94 aa5.58□□□□□ -1.52
CNOT1-222ENST00000570139 DLX6P56179 175 aa5.58□□□□□ -1.52
CNOT1-222ENST00000570139 EIF4EBP1Q13541 118 aaPredicted RBP5.58□□□□□ -1.52
CNOT1-222ENST00000570139 IAH1Q2TAA2 248 aaPredicted RBP5.58□□□□□ -1.52
CNOT1-222ENST00000570139 OR13D1Q8NGV5 346 aa5.58□□□□□ -1.52
CNOT1-222ENST00000570139 OR51H1Q8NH63 302 aa5.58□□□□□ -1.52
CNOT1-222ENST00000570139 OR4S2Q8NH73 311 aa5.58□□□□□ -1.52
CNOT1-222ENST00000570139 TCTEX1D2Q8WW35 142 aa5.58□□□□□ -1.52
CNOT1-222ENST00000570139 TP53RKQ96S44 253 aa5.58□□□□□ -1.52
CNOT1-222ENST00000570139 CLEC7AQ9BXN2 247 aa5.58□□□□□ -1.52
CNOT1-222ENST00000570139 HIPK2Q9H2X6 1198 aa5.58□□□□□ -1.52
CNOT1-222ENST00000570139 IFI27L2Q9H2X8 130 aa5.58□□□□□ -1.52
CNOT1-222ENST00000570139 SDHAF2Q9NX18 166 aa5.58□□□□□ -1.52
CNOT1-222ENST00000570139 COA4Q9NYJ1 87 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms