RNA–Protein interactions for RNA: ENST00000533421.2

SF3B2-213, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-213ENST00000533421 NPIPB5A8MRT5 1133 aa9.4□□□□□ -0.9
SF3B2-213ENST00000533421 CDS2O95674 445 aa9.4□□□□□ -0.9
SF3B2-213ENST00000533421 IGHV3-23P01764 117 aa9.4□□□□□ -0.9
SF3B2-213ENST00000533421 P0C879 139 aa9.4□□□□□ -0.9
SF3B2-213ENST00000533421 NHLRC4P0CG21 123 aaPredicted RBP9.4□□□□□ -0.9
SF3B2-213ENST00000533421 HIST1H1BP16401 226 aaKnown RBP9.4□□□□□ -0.9
SF3B2-213ENST00000533421 RHOGP84095 191 aa9.4□□□□□ -0.9
SF3B2-213ENST00000533421 DHODHQ02127 395 aa9.4□□□□□ -0.9
SF3B2-213ENST00000533421 THOC7Q6I9Y2 204 aaKnown RBP9.4□□□□□ -0.9
SF3B2-213ENST00000533421 FAM219AQ8IW50 185 aa9.4□□□□□ -0.9
SF3B2-213ENST00000533421 OR4A16Q8NH70 328 aa9.4□□□□□ -0.9
SF3B2-213ENST00000533421 GPR146Q96CH1 333 aa9.4□□□□□ -0.9
SF3B2-213ENST00000533421 C7orf50Q9BRJ6 194 aaKnown RBP9.4□□□□□ -0.9
SF3B2-213ENST00000533421 SRSF8Q9BRL6 282 aaKnown RBP9.4□□□□□ -0.9
SF3B2-213ENST00000533421 C20orf85Q9H1P6 137 aa9.4□□□□□ -0.9
SF3B2-213ENST00000533421 FAM212BQ9NTI7 297 aaPredicted RBP9.4□□□□□ -0.9
SF3B2-213ENST00000533421 PEMTQ9UBM1 199 aa9.4□□□□□ -0.9
SF3B2-213ENST00000533421 ST8SIA3O43173 380 aa9.39□□□□□ -0.91
SF3B2-213ENST00000533421 OR2J3O76001 311 aa9.39□□□□□ -0.91
SF3B2-213ENST00000533421 SFT2D2O95562 160 aa9.39□□□□□ -0.91
SF3B2-213ENST00000533421 TRAPPC2P0DI81 140 aa9.39□□□□□ -0.91
SF3B2-213ENST00000533421 TRAPPC2BP0DI82 140 aa9.39□□□□□ -0.91
SF3B2-213ENST00000533421 DEFA4P12838 97 aa9.39□□□□□ -0.91
SF3B2-213ENST00000533421 MECP2P51608 486 aaKnown RBP9.39□□□□□ -0.91
SF3B2-213ENST00000533421 WT1-ASQ06250 92 aa9.39□□□□□ -0.91
SF3B2-213ENST00000533421 EXOSC2Q13868 293 aaKnown RBP9.39□□□□□ -0.91
SF3B2-213ENST00000533421 TMEM128Q5BJH2 165 aa9.39□□□□□ -0.91
SF3B2-213ENST00000533421 HSD17B13Q7Z5P4 300 aaPredicted RBP9.39□□□□□ -0.91
SF3B2-213ENST00000533421 DEDD2Q8WXF8 326 aa9.39□□□□□ -0.91
SF3B2-213ENST00000533421 RBPMSQ93062 196 aaKnown RBP9.39□□□□□ -0.91
SF3B2-213ENST00000533421 RRNAD1Q96FB5 475 aaKnown RBP9.39□□□□□ -0.91
SF3B2-213ENST00000533421 PRR25Q96S07 402 aa9.39□□□□□ -0.91
SF3B2-213ENST00000533421 SEC22CQ9BRL7 303 aa9.39□□□□□ -0.91
SF3B2-213ENST00000533421 TMEM14BQ9NUH8 114 aa9.39□□□□□ -0.91
SF3B2-213ENST00000533421 NUDT15Q9NV35 164 aa9.39□□□□□ -0.91
SF3B2-213ENST00000533421 THYN1Q9P016 225 aa9.39□□□□□ -0.91
SF3B2-213ENST00000533421 CACNG5Q9UF02 275 aa9.39□□□□□ -0.91
SF3B2-213ENST00000533421 KCNIP3Q9Y2W7 256 aa9.39□□□□□ -0.91
SF3B2-213ENST00000533421 SMAD5-AS1Q9Y6J3 95 aa9.39□□□□□ -0.91
SF3B2-213ENST00000533421 NBEAL2Q6ZNJ1 2754 aa9.39□□□□□ -0.91
SF3B2-213ENST00000533421 TRBV9A0A0B4J1U6 114 aa9.38□□□□□ -0.91
SF3B2-213ENST00000533421 IGHV3-21A0A0B4J1V1 117 aa9.38□□□□□ -0.91
SF3B2-213ENST00000533421 FAM240BA0A1B0GVZ2 78 aa9.38□□□□□ -0.91
SF3B2-213ENST00000533421 C9orf170A2RU37 121 aa9.38□□□□□ -0.91
SF3B2-213ENST00000533421 TCRBP04435 133 aa9.38□□□□□ -0.91
SF3B2-213ENST00000533421 HOXB5P09067 269 aa9.38□□□□□ -0.91
SF3B2-213ENST00000533421 OR13C7P0DN81 318 aa9.38□□□□□ -0.91
SF3B2-213ENST00000533421 SPNP16150 400 aa9.38□□□□□ -0.91
SF3B2-213ENST00000533421 PSMB6P28072 239 aa9.38□□□□□ -0.91
SF3B2-213ENST00000533421 ASAH1Q13510 395 aa9.38□□□□□ -0.91
SF3B2-213ENST00000533421 KLF5Q13887 457 aaPredicted RBP9.38□□□□□ -0.91
SF3B2-213ENST00000533421 C4orf46Q504U0 113 aa9.38□□□□□ -0.91
SF3B2-213ENST00000533421 OR9G4Q8NGQ1 327 aa9.38□□□□□ -0.91
SF3B2-213ENST00000533421 OR1L8Q8NGR8 309 aa9.38□□□□□ -0.91
SF3B2-213ENST00000533421 GALNT14Q96FL9 552 aa9.38□□□□□ -0.91
SF3B2-213ENST00000533421 TMEM56Q96MV1 263 aa9.38□□□□□ -0.91
SF3B2-213ENST00000533421 NDUFA4L2Q9NRX3 87 aa9.38□□□□□ -0.91
SF3B2-213ENST00000533421 PRNDQ9UKY0 176 aa9.38□□□□□ -0.91
SF3B2-213ENST00000533421 DMRT1Q9Y5R6 373 aa9.38□□□□□ -0.91
SF3B2-213ENST00000533421 TMEM56-RWDD3S4R434 201 aa9.38□□□□□ -0.91
SF3B2-213ENST00000533421 DNAH3Q8TD57 4116 aa9.37□□□□□ -0.91
SF3B2-213ENST00000533421 NDUFB8O95169 186 aa9.37□□□□□ -0.91
SF3B2-213ENST00000533421 IFNA17P01571 189 aa9.37□□□□□ -0.91
SF3B2-213ENST00000533421 TRBV12-3P01733 135 aa9.37□□□□□ -0.91
SF3B2-213ENST00000533421 HLA-AP01891 365 aaKnown RBP9.37□□□□□ -0.91
SF3B2-213ENST00000533421 OR4E1P0C645 316 aa9.37□□□□□ -0.91
SF3B2-213ENST00000533421 ANXA3P12429 323 aa9.37□□□□□ -0.91
SF3B2-213ENST00000533421 CTRB1P17538 263 aa9.37□□□□□ -0.91
SF3B2-213ENST00000533421 MFAP2P55001 183 aa9.37□□□□□ -0.91
SF3B2-213ENST00000533421 DHRS2Q13268 280 aa9.37□□□□□ -0.91
SF3B2-213ENST00000533421 C15orf32Q32M92 178 aa9.37□□□□□ -0.91
SF3B2-213ENST00000533421 CTRB2Q6GPI1 263 aa9.37□□□□□ -0.91
SF3B2-213ENST00000533421 MZT2BQ6NZ67 158 aa9.37□□□□□ -0.91
SF3B2-213ENST00000533421 CADM3Q8N126 398 aa9.37□□□□□ -0.91
SF3B2-213ENST00000533421 LGI3Q8N145 548 aa9.37□□□□□ -0.91
SF3B2-213ENST00000533421 CXorf58Q96LI9 332 aa9.37□□□□□ -0.91
SF3B2-213ENST00000533421 FANCD2OSQ96PS1 177 aa9.37□□□□□ -0.91
SF3B2-213ENST00000533421 TSC22D3Q99576 134 aa9.37□□□□□ -0.91
SF3B2-213ENST00000533421 FKBP11Q9NYL4 201 aa9.37□□□□□ -0.91
SF3B2-213ENST00000533421 LSM4Q9Y4Z0 139 aaKnown RBP9.37□□□□□ -0.91
SF3B2-213ENST00000533421 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.36□□□□□ -0.91
SF3B2-213ENST00000533421 ADAP1O75689 374 aa9.36□□□□□ -0.91
SF3B2-213ENST00000533421 B3GALNT1O75752 331 aa9.36□□□□□ -0.91
SF3B2-213ENST00000533421 CRYGCP07315 174 aa9.36□□□□□ -0.91
SF3B2-213ENST00000533421 H2AFB2P0C5Z0 115 aa9.36□□□□□ -0.91
SF3B2-213ENST00000533421 GP9P14770 177 aa9.36□□□□□ -0.91
SF3B2-213ENST00000533421 SYNJ2BPP57105 145 aa9.36□□□□□ -0.91
SF3B2-213ENST00000533421 HSPE1P61604 102 aaKnown RBP9.36□□□□□ -0.91
SF3B2-213ENST00000533421 LCN12Q6JVE5 192 aa9.36□□□□□ -0.91
SF3B2-213ENST00000533421 NRARPQ7Z6K4 114 aa9.36□□□□□ -0.91
SF3B2-213ENST00000533421 LYG2Q86SG7 212 aa9.36□□□□□ -0.91
SF3B2-213ENST00000533421 ENKURQ8TC29 256 aa9.36□□□□□ -0.91
SF3B2-213ENST00000533421 EEF1AKMT3Q96AZ1 226 aa9.36□□□□□ -0.91
SF3B2-213ENST00000533421 ZC4H2Q9NQZ6 224 aa9.36□□□□□ -0.91
SF3B2-213ENST00000533421 SIGLEC8Q9NYZ4 499 aa9.36□□□□□ -0.91
SF3B2-213ENST00000533421 FBXL7Q9UJT9 491 aa9.36□□□□□ -0.91
SF3B2-213ENST00000533421 TRBV7-1A0A0A6YYK4 115 aa9.35□□□□□ -0.91
SF3B2-213ENST00000533421 MFSD2BA6NFX1 497 aa9.35□□□□□ -0.91
SF3B2-213ENST00000533421 MPTX1A8MV57 137 aa9.35□□□□□ -0.91
SF3B2-213ENST00000533421 CCSO14618 274 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms