RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 IGHV3-23P01764 117 aa11.43□□□□□ -0.58
ATG4B-213ENST00000460211 OR5AC1P0C628 307 aa11.43□□□□□ -0.58
ATG4B-213ENST00000460211 ARL3P36405 182 aa11.43□□□□□ -0.58
ATG4B-213ENST00000460211 ETV6P41212 452 aa11.43□□□□□ -0.58
ATG4B-213ENST00000460211 INPP1P49441 399 aa11.43□□□□□ -0.58
ATG4B-213ENST00000460211 ERHP84090 104 aaKnown RBP11.43□□□□□ -0.58
ATG4B-213ENST00000460211 CLEC19AQ6UXS0 136 aa11.43□□□□□ -0.58
ATG4B-213ENST00000460211 VN1R17PQ8TDU5 208 aa11.43□□□□□ -0.58
ATG4B-213ENST00000460211 WWC2-AS2Q96NR7 200 aa11.43□□□□□ -0.58
ATG4B-213ENST00000460211 PRR25Q96S07 402 aa11.43□□□□□ -0.58
ATG4B-213ENST00000460211 TMEM222Q9H0R3 208 aa11.43□□□□□ -0.58
ATG4B-213ENST00000460211 F11RQ9Y624 299 aaKnown RBP11.43□□□□□ -0.58
ATG4B-213ENST00000460211 SORL1Q92673 2214 aa11.42□□□□□ -0.58
ATG4B-213ENST00000460211 CRYM-AS1A6NIL9 109 aa11.42□□□□□ -0.58
ATG4B-213ENST00000460211 CDS2O95674 445 aa11.42□□□□□ -0.58
ATG4B-213ENST00000460211 IFNA17P01571 189 aa11.42□□□□□ -0.58
ATG4B-213ENST00000460211 IGKV1-5P01602 117 aa11.42□□□□□ -0.58
ATG4B-213ENST00000460211 CLEC3BP05452 202 aa11.42□□□□□ -0.58
ATG4B-213ENST00000460211 PRCDQ00LT1 54 aa11.42□□□□□ -0.58
ATG4B-213ENST00000460211 KLF9Q13886 244 aaPredicted RBP11.42□□□□□ -0.58
ATG4B-213ENST00000460211 FAM106AQ4KMX7 169 aa11.42□□□□□ -0.58
ATG4B-213ENST00000460211 FAM219AQ8IW50 185 aa11.42□□□□□ -0.58
ATG4B-213ENST00000460211 TRIM63Q969Q1 353 aa11.42□□□□□ -0.58
ATG4B-213ENST00000460211 PLEKHA3Q9HB20 300 aa11.42□□□□□ -0.58
ATG4B-213ENST00000460211 PIGBOS1A0A0B4J2F0 54 aa11.41□□□□□ -0.58
ATG4B-213ENST00000460211 DBX1A6NMT0 343 aa11.41□□□□□ -0.58
ATG4B-213ENST00000460211 PPP5D1E7EU14 171 aa11.41□□□□□ -0.58
ATG4B-213ENST00000460211 OR2C1O95371 312 aa11.41□□□□□ -0.58
ATG4B-213ENST00000460211 ANXA3P12429 323 aa11.41□□□□□ -0.58
ATG4B-213ENST00000460211 ZNF79Q15937 498 aa11.41□□□□□ -0.58
ATG4B-213ENST00000460211 ZNF57Q68EA5 555 aaPredicted RBP11.41□□□□□ -0.58
ATG4B-213ENST00000460211 GPHB5Q86YW7 130 aa11.41□□□□□ -0.58
ATG4B-213ENST00000460211 OR2C3Q8N628 320 aa11.41□□□□□ -0.58
ATG4B-213ENST00000460211 OR1P1Q8NH06 330 aa11.41□□□□□ -0.58
ATG4B-213ENST00000460211 GLYATL2Q8WU03 294 aa11.41□□□□□ -0.58
ATG4B-213ENST00000460211 RBPMSQ93062 196 aaKnown RBP11.41□□□□□ -0.58
ATG4B-213ENST00000460211 CCDC140Q96MF4 163 aa11.41□□□□□ -0.58
ATG4B-213ENST00000460211 ENY2Q9NPA8 101 aa11.41□□□□□ -0.58
ATG4B-213ENST00000460211 SIGLEC8Q9NYZ4 499 aa11.41□□□□□ -0.58
ATG4B-213ENST00000460211 S4R3C0 116 aa11.41□□□□□ -0.58
ATG4B-213ENST00000460211 MFSD2BA6NFX1 497 aa11.4□□□□□ -0.58
ATG4B-213ENST00000460211 IGLV1-51P01701 117 aa11.4□□□□□ -0.58
ATG4B-213ENST00000460211 GP9P14770 177 aa11.4□□□□□ -0.58
ATG4B-213ENST00000460211 SPNP16150 400 aa11.4□□□□□ -0.58
ATG4B-213ENST00000460211 AKR1C4P17516 323 aa11.4□□□□□ -0.58
ATG4B-213ENST00000460211 SNCAP37840 140 aa11.4□□□□□ -0.58
ATG4B-213ENST00000460211 IZUMO4Q1ZYL8 232 aa11.4□□□□□ -0.58
ATG4B-213ENST00000460211 TRIQKQ629K1 86 aa11.4□□□□□ -0.58
ATG4B-213ENST00000460211 PLET1Q6UQ28 207 aa11.4□□□□□ -0.58
ATG4B-213ENST00000460211 SLC35G3Q8N808 338 aa11.4□□□□□ -0.58
ATG4B-213ENST00000460211 ZNF502Q8TBZ5 544 aa11.4□□□□□ -0.58
ATG4B-213ENST00000460211 GALNT14Q96FL9 552 aa11.4□□□□□ -0.58
ATG4B-213ENST00000460211 SLC25A21Q9BQT8 299 aaPredicted RBP11.4□□□□□ -0.58
ATG4B-213ENST00000460211 SRRQ9GZT4 340 aa11.4□□□□□ -0.58
ATG4B-213ENST00000460211 GAR1Q9NY12 217 aaKnown RBP11.4□□□□□ -0.58
ATG4B-213ENST00000460211 CACFD1Q9UGQ2 172 aa11.4□□□□□ -0.58
ATG4B-213ENST00000460211 A0A0B4J293 547 aa11.39□□□□□ -0.59
ATG4B-213ENST00000460211 ZNF320A2RRD8 509 aa11.39□□□□□ -0.59
ATG4B-213ENST00000460211 LGALS9O00182 355 aa11.39□□□□□ -0.59
ATG4B-213ENST00000460211 HLA-AP01891 365 aaKnown RBP11.39□□□□□ -0.59
ATG4B-213ENST00000460211 CSN3P07498 182 aa11.39□□□□□ -0.59
ATG4B-213ENST00000460211 P0C879 139 aa11.39□□□□□ -0.59
ATG4B-213ENST00000460211 GPR183P32249 361 aa11.39□□□□□ -0.59
ATG4B-213ENST00000460211 SUB1P53999 127 aaKnown RBP eCLIP11.39□□□□□ -0.59
ATG4B-213ENST00000460211 TMEM268Q5VZI3 342 aa11.39□□□□□ -0.59
ATG4B-213ENST00000460211 IL34Q6ZMJ4 242 aa11.39□□□□□ -0.59
ATG4B-213ENST00000460211 SELENOHQ8IZQ5 122 aaKnown RBP11.39□□□□□ -0.59
ATG4B-213ENST00000460211 IL22RA2Q969J5 263 aa11.39□□□□□ -0.59
ATG4B-213ENST00000460211 ATP6V0BQ99437 205 aa11.39□□□□□ -0.59
ATG4B-213ENST00000460211 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.39□□□□□ -0.59
ATG4B-213ENST00000460211 C21orf62Q9NYP8 219 aa11.39□□□□□ -0.59
ATG4B-213ENST00000460211 DMRT1Q9Y5R6 373 aa11.39□□□□□ -0.59
ATG4B-213ENST00000460211 ST8SIA3O43173 380 aa11.38□□□□□ -0.59
ATG4B-213ENST00000460211 SRPXP78539 464 aa11.38□□□□□ -0.59
ATG4B-213ENST00000460211 LCN12Q6JVE5 192 aa11.38□□□□□ -0.59
ATG4B-213ENST00000460211 SPSB3Q6PJ21 355 aa11.38□□□□□ -0.59
ATG4B-213ENST00000460211 TMED4Q7Z7H5 227 aa11.38□□□□□ -0.59
ATG4B-213ENST00000460211 ZNF114Q8NC26 417 aa11.38□□□□□ -0.59
ATG4B-213ENST00000460211 OR2K2Q8NGT1 345 aa11.38□□□□□ -0.59
ATG4B-213ENST00000460211 DYNLRB2Q8TF09 96 aa11.38□□□□□ -0.59
ATG4B-213ENST00000460211 SCARB1Q8WTV0 552 aa11.38□□□□□ -0.59
ATG4B-213ENST00000460211 MISP3Q96FF7 219 aa11.38□□□□□ -0.59
ATG4B-213ENST00000460211 BSCL2Q96G97 398 aaPredicted RBP11.38□□□□□ -0.59
ATG4B-213ENST00000460211 B9D2Q9BPU9 175 aa11.38□□□□□ -0.59
ATG4B-213ENST00000460211 PALMDQ9NP74 551 aa11.38□□□□□ -0.59
ATG4B-213ENST00000460211 LSM4Q9Y4Z0 139 aaKnown RBP11.38□□□□□ -0.59
ATG4B-213ENST00000460211 SMAD5-AS1Q9Y6J3 95 aa11.38□□□□□ -0.59
ATG4B-213ENST00000460211 TMEM56-RWDD3S4R434 201 aa11.38□□□□□ -0.59
ATG4B-213ENST00000460211 NAP1L6A6NFF2 107 aa11.37□□□□□ -0.59
ATG4B-213ENST00000460211 CENPXA8MT69 81 aa11.37□□□□□ -0.59
ATG4B-213ENST00000460211 INS-IGF2F8WCM5 200 aa11.37□□□□□ -0.59
ATG4B-213ENST00000460211 HOXA1P49639 335 aaPredicted RBP11.37□□□□□ -0.59
ATG4B-213ENST00000460211 MFAP2P55001 183 aa11.37□□□□□ -0.59
ATG4B-213ENST00000460211 SPCS3P61009 180 aa11.37□□□□□ -0.59
ATG4B-213ENST00000460211 TMEM187Q14656 261 aa11.37□□□□□ -0.59
ATG4B-213ENST00000460211 Q56UQ5 140 aa11.37□□□□□ -0.59
ATG4B-213ENST00000460211 HAPLN4Q86UW8 402 aa11.37□□□□□ -0.59
ATG4B-213ENST00000460211 LGI3Q8N145 548 aa11.37□□□□□ -0.59
ATG4B-213ENST00000460211 OR52E5Q8NH55 327 aa11.37□□□□□ -0.59
ATG4B-213ENST00000460211 TMEM230Q96A57 120 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms