RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 AHCTF1Q8WYP5 2266 aa12.48□□□□□ -0.41
VLDLR-202ENST00000382099 USF3Q68DE3 2245 aa12.48□□□□□ -0.41
VLDLR-202ENST00000382099 MT-CO3P00414 261 aa12.48□□□□□ -0.41
VLDLR-202ENST00000382099 IGLV3-1P01715 115 aa12.48□□□□□ -0.41
VLDLR-202ENST00000382099 GCSHP23434 173 aa12.48□□□□□ -0.41
VLDLR-202ENST00000382099 ZNF718Q3SXZ3 478 aa12.48□□□□□ -0.41
VLDLR-202ENST00000382099 GDF5OSQ5U4N7 250 aa12.48□□□□□ -0.41
VLDLR-202ENST00000382099 PCSK4Q6UW60 755 aa12.48□□□□□ -0.41
VLDLR-202ENST00000382099 OR52E5Q8NH55 327 aa12.48□□□□□ -0.41
VLDLR-202ENST00000382099 OR10D3Q8NH80 312 aa12.48□□□□□ -0.41
VLDLR-202ENST00000382099 SPACA9Q96E40 222 aaPredicted RBP12.48□□□□□ -0.41
VLDLR-202ENST00000382099 SPAG8Q99932 426 aaPredicted RBP12.48□□□□□ -0.41
VLDLR-202ENST00000382099 PSG8Q9UQ74 426 aa12.48□□□□□ -0.41
VLDLR-202ENST00000382099 A0A1W2PQD3 144 aa12.48□□□□□ -0.41
VLDLR-202ENST00000382099 SMIM20Q8N5G0 67 aa12.48□□□□□ -0.41
VLDLR-202ENST00000382099 C10orf35Q96D05 121 aa12.48□□□□□ -0.41
VLDLR-202ENST00000382099 C1QTNF5Q9BXJ0 243 aa12.48□□□□□ -0.41
VLDLR-202ENST00000382099 MS4A5Q9H3V2 200 aa12.48□□□□□ -0.41
VLDLR-202ENST00000382099 BOKQ9UMX3 212 aaPredicted RBP12.48□□□□□ -0.41
VLDLR-202ENST00000382099 LSM4Q9Y4Z0 139 aaKnown RBP12.48□□□□□ -0.41
VLDLR-202ENST00000382099 GPR179Q6PRD1 2367 aa12.48□□□□□ -0.41
VLDLR-202ENST00000382099 A1L4Q6 167 aa12.47□□□□□ -0.41
VLDLR-202ENST00000382099 SPINK8P0C7L1 97 aa12.47□□□□□ -0.41
VLDLR-202ENST00000382099 CA6P23280 308 aa12.47□□□□□ -0.41
VLDLR-202ENST00000382099 IGHV3-15A0A0B4J1V0 119 aa12.47□□□□□ -0.41
VLDLR-202ENST00000382099 Q6ZS52 159 aa12.47□□□□□ -0.41
VLDLR-202ENST00000382099 RAB1CQ92928 201 aa12.47□□□□□ -0.41
VLDLR-202ENST00000382099 HEYLQ9NQ87 328 aaPredicted RBP12.47□□□□□ -0.41
VLDLR-202ENST00000382099 IGHV3-20A0A0C4DH32 117 aa12.47□□□□□ -0.41
VLDLR-202ENST00000382099 KLRC4-KLRK1H3BQV0 150 aa12.47□□□□□ -0.41
VLDLR-202ENST00000382099 CER1O95813 267 aa12.47□□□□□ -0.41
VLDLR-202ENST00000382099 WIPI1Q5MNZ9 446 aaPredicted RBP12.47□□□□□ -0.41
VLDLR-202ENST00000382099 C9orf135Q5VTT2 229 aa12.47□□□□□ -0.41
VLDLR-202ENST00000382099 OR13H1Q8NG92 308 aa12.47□□□□□ -0.41
VLDLR-202ENST00000382099 CACNG8Q8WXS5 425 aa12.47□□□□□ -0.41
VLDLR-202ENST00000382099 NPIPB13A6NJU9 1138 aa12.46□□□□□ -0.41
VLDLR-202ENST00000382099 LRRC30A6NM36 301 aa12.46□□□□□ -0.41
VLDLR-202ENST00000382099 NPIPB4C9JG80 1138 aa12.46□□□□□ -0.41
VLDLR-202ENST00000382099 FAM90A26D6RGX4 464 aa12.46□□□□□ -0.41
VLDLR-202ENST00000382099 P04436 131 aa12.46□□□□□ -0.41
VLDLR-202ENST00000382099 LINC00696Q6ZRV3 163 aa12.46□□□□□ -0.41
VLDLR-202ENST00000382099 ST8SIA1Q92185 356 aa12.46□□□□□ -0.41
VLDLR-202ENST00000382099 CRISPLD2Q9H0B8 497 aa12.46□□□□□ -0.41
VLDLR-202ENST00000382099 PGPEP1Q9NXJ5 209 aa12.46□□□□□ -0.41
VLDLR-202ENST00000382099 WDR83OSQ9Y284 106 aa12.46□□□□□ -0.41
VLDLR-202ENST00000382099 GVINP1Q7Z2Y8 2422 aa12.46□□□□□ -0.41
VLDLR-202ENST00000382099 CPAMD8Q8IZJ3 1885 aa12.46□□□□□ -0.42
VLDLR-202ENST00000382099 PMS2P5A8MQ11 134 aa12.46□□□□□ -0.42
VLDLR-202ENST00000382099 CHEK1O14757 476 aa12.46□□□□□ -0.42
VLDLR-202ENST00000382099 NMUP48645 174 aa12.46□□□□□ -0.42
VLDLR-202ENST00000382099 TIMM23BQ5SRD1 257 aa12.46□□□□□ -0.42
VLDLR-202ENST00000382099 Q6ZSR6 202 aa12.46□□□□□ -0.42
VLDLR-202ENST00000382099 AKIRIN1Q9H9L7 192 aaPredicted RBP12.46□□□□□ -0.42
VLDLR-202ENST00000382099 TRAPPC2LQ9UL33 140 aa12.46□□□□□ -0.42
VLDLR-202ENST00000382099 SPTBN2O15020 2390 aa12.46□□□□□ -0.42
VLDLR-202ENST00000382099 SMIM13P0DJ93 91 aa12.45□□□□□ -0.42
VLDLR-202ENST00000382099 H2BFWTQ7Z2G1 175 aa12.45□□□□□ -0.42
VLDLR-202ENST00000382099 BOD1L2Q8IYS8 172 aa12.45□□□□□ -0.42
VLDLR-202ENST00000382099 NUP35Q8NFH5 326 aa12.45□□□□□ -0.42
VLDLR-202ENST00000382099 URB1-AS1Q96HZ7 61 aa12.45□□□□□ -0.42
VLDLR-202ENST00000382099 ADTRPQ96IZ2 230 aa12.45□□□□□ -0.42
VLDLR-202ENST00000382099 ZNF488Q96MN9 340 aa12.45□□□□□ -0.42
VLDLR-202ENST00000382099 SMIM27A0A1W2PRY6 76 aa12.45□□□□□ -0.42
VLDLR-202ENST00000382099 EFNA2O43921 213 aa12.45□□□□□ -0.42
VLDLR-202ENST00000382099 SLC37A2Q8TED4 501 aa12.45□□□□□ -0.42
VLDLR-202ENST00000382099 LRRC29Q8WV35 223 aa12.45□□□□□ -0.42
VLDLR-202ENST00000382099 DUSP13Q9UII6 198 aa12.45□□□□□ -0.42
VLDLR-202ENST00000382099 NBEAQ8NFP9 2946 aa12.45□□□□□ -0.42
VLDLR-202ENST00000382099 TRBV7-9A0A0J9YWB2 115 aa12.45□□□□□ -0.42
VLDLR-202ENST00000382099 K7ERJ3 54 aa12.45□□□□□ -0.42
VLDLR-202ENST00000382099 TNFSF11O14788 317 aa12.45□□□□□ -0.42
VLDLR-202ENST00000382099 INSL3P51460 131 aa12.45□□□□□ -0.42
VLDLR-202ENST00000382099 FAM120AOSQ5T036 256 aa12.45□□□□□ -0.42
VLDLR-202ENST00000382099 H1FXQ92522 213 aaKnown RBP12.45□□□□□ -0.42
VLDLR-202ENST00000382099 ANAPC13Q9BS18 74 aa12.45□□□□□ -0.42
VLDLR-202ENST00000382099 LIPFP07098 398 aa12.44□□□□□ -0.42
VLDLR-202ENST00000382099 FAM162BQ5T6X4 162 aa12.44□□□□□ -0.42
VLDLR-202ENST00000382099 OR8A1Q8NGG7 326 aa12.44□□□□□ -0.42
VLDLR-202ENST00000382099 SPATA25Q9BR10 227 aa12.44□□□□□ -0.42
VLDLR-202ENST00000382099 LY96Q9Y6Y9 160 aa12.44□□□□□ -0.42
VLDLR-202ENST00000382099 ZIC3O60481 467 aa12.44□□□□□ -0.42
VLDLR-202ENST00000382099 REG1BP48304 166 aa12.44□□□□□ -0.42
VLDLR-202ENST00000382099 HHEXQ03014 270 aa12.44□□□□□ -0.42
VLDLR-202ENST00000382099 ANXA2RQ3ZCQ2 193 aa12.44□□□□□ -0.42
VLDLR-202ENST00000382099 DRAM1Q8N682 238 aa12.44□□□□□ -0.42
VLDLR-202ENST00000382099 ZNF837Q96EG3 531 aaPredicted RBP12.44□□□□□ -0.42
VLDLR-202ENST00000382099 OXGR1Q96P68 337 aa12.44□□□□□ -0.42
VLDLR-202ENST00000382099 SH2D2AQ9NP31 389 aa12.44□□□□□ -0.42
VLDLR-202ENST00000382099 HIGD1CA8MV81 97 aa12.43□□□□□ -0.42
VLDLR-202ENST00000382099 CRXO43186 299 aaPredicted RBP12.43□□□□□ -0.42
VLDLR-202ENST00000382099 OR5AL1P0C617 328 aa12.43□□□□□ -0.42
VLDLR-202ENST00000382099 KLF5Q13887 457 aaPredicted RBP12.43□□□□□ -0.42
VLDLR-202ENST00000382099 RP1L1Q8IWN7 2480 aaPredicted RBP12.43□□□□□ -0.42
VLDLR-202ENST00000382099 MKXQ8IYA7 352 aa12.43□□□□□ -0.42
VLDLR-202ENST00000382099 LINC00479Q96M42 142 aa12.43□□□□□ -0.42
VLDLR-202ENST00000382099 VGLL1Q99990 258 aa12.43□□□□□ -0.42
VLDLR-202ENST00000382099 KLK10O43240 276 aa12.43□□□□□ -0.42
VLDLR-202ENST00000382099 IGKV3-11P04433 115 aa12.43□□□□□ -0.42
VLDLR-202ENST00000382099 SP9P0CG40 484 aa12.43□□□□□ -0.42
VLDLR-202ENST00000382099 KIR2DL1P43626 348 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms