RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 ELOA3CA0A087WX78 387 aaPredicted RBP14.62□□□□□ -0.07
TRAF3IP1-201ENST00000373327 IGKV1-16P04430 117 aa14.62□□□□□ -0.07
TRAF3IP1-201ENST00000373327 TREML4Q6UXN2 200 aa14.62□□□□□ -0.07
TRAF3IP1-201ENST00000373327 C1orf162Q8NEQ5 155 aaPredicted RBP14.62□□□□□ -0.07
TRAF3IP1-201ENST00000373327 MBNL3Q9NUK0 354 aaKnown RBP14.62□□□□□ -0.07
TRAF3IP1-201ENST00000373327 ATG2AQ2TAZ0 1938 aa14.62□□□□□ -0.07
TRAF3IP1-201ENST00000373327 FOXH1O75593 365 aa14.62□□□□□ -0.07
TRAF3IP1-201ENST00000373327 SAA1P0DJI8 122 aaPredicted RBP14.62□□□□□ -0.07
TRAF3IP1-201ENST00000373327 CD81P60033 236 aa14.62□□□□□ -0.07
TRAF3IP1-201ENST00000373327 GNB2P62879 340 aa14.62□□□□□ -0.07
TRAF3IP1-201ENST00000373327 PRR30Q53SZ7 412 aaPredicted RBP14.62□□□□□ -0.07
TRAF3IP1-201ENST00000373327 EAF1Q96JC9 268 aaPredicted RBP14.62□□□□□ -0.07
TRAF3IP1-201ENST00000373327 TMEM167BQ9NRX6 74 aa14.62□□□□□ -0.07
TRAF3IP1-201ENST00000373327 COA4Q9NYJ1 87 aa14.62□□□□□ -0.07
TRAF3IP1-201ENST00000373327 MFAP2P55001 183 aa14.61□□□□□ -0.07
TRAF3IP1-201ENST00000373327 PAX5Q02548 391 aa14.61□□□□□ -0.07
TRAF3IP1-201ENST00000373327 PLA2G2CQ5R387 149 aa14.61□□□□□ -0.07
TRAF3IP1-201ENST00000373327 Q6ZS49 121 aa14.61□□□□□ -0.07
TRAF3IP1-201ENST00000373327 KDF1Q8NAX2 398 aaPredicted RBP14.61□□□□□ -0.07
TRAF3IP1-201ENST00000373327 FAM222BQ8WU58 562 aa14.61□□□□□ -0.07
TRAF3IP1-201ENST00000373327 ZNF586Q9NXT0 402 aa14.61□□□□□ -0.07
TRAF3IP1-201ENST00000373327 TMEM250H0YL14 139 aa14.61□□□□□ -0.07
TRAF3IP1-201ENST00000373327 LEMD1Q68G75 181 aa14.61□□□□□ -0.07
TRAF3IP1-201ENST00000373327 PDPNQ86YL7 162 aa14.61□□□□□ -0.07
TRAF3IP1-201ENST00000373327 CHEK1O14757 476 aa14.61□□□□□ -0.07
TRAF3IP1-201ENST00000373327 HOXA5P20719 270 aa14.61□□□□□ -0.07
TRAF3IP1-201ENST00000373327 SFRP2Q96HF1 295 aa14.61□□□□□ -0.07
TRAF3IP1-201ENST00000373327 PAXXQ9BUH6 204 aa14.61□□□□□ -0.07
TRAF3IP1-201ENST00000373327 TUBA4BQ9H853 241 aa14.61□□□□□ -0.07
TRAF3IP1-201ENST00000373327 A0A1W2PN81 502 aa14.61□□□□□ -0.07
TRAF3IP1-201ENST00000373327 CENPWQ5EE01 88 aa14.61□□□□□ -0.07
TRAF3IP1-201ENST00000373327 SFXN3Q9BWM7 321 aa14.61□□□□□ -0.07
TRAF3IP1-201ENST00000373327 IL19Q9UHD0 177 aa14.61□□□□□ -0.07
TRAF3IP1-201ENST00000373327 NAV3Q8IVL0 2385 aa14.6□□□□□ -0.07
TRAF3IP1-201ENST00000373327 C15orf62A8K5M9 175 aa14.6□□□□□ -0.07
TRAF3IP1-201ENST00000373327 ZNF134P52741 427 aa14.6□□□□□ -0.07
TRAF3IP1-201ENST00000373327 ERVK11-1P61568 191 aa14.6□□□□□ -0.07
TRAF3IP1-201ENST00000373327 RPL11P62913 178 aaKnown RBP14.6□□□□□ -0.07
TRAF3IP1-201ENST00000373327 TCTEX1D1Q8N7M0 179 aa14.6□□□□□ -0.07
TRAF3IP1-201ENST00000373327 SCNM1Q9BWG6 230 aa14.6□□□□□ -0.07
TRAF3IP1-201ENST00000373327 TIMM9Q9Y5J7 89 aa14.6□□□□□ -0.07
TRAF3IP1-201ENST00000373327 TRAV5A0A0B4J249 113 aa14.6□□□□□ -0.07
TRAF3IP1-201ENST00000373327 MPDU1O75352 247 aa14.6□□□□□ -0.07
TRAF3IP1-201ENST00000373327 CA1P00915 261 aaPredicted RBP14.6□□□□□ -0.07
TRAF3IP1-201ENST00000373327 TPPP2P59282 170 aa14.6□□□□□ -0.07
TRAF3IP1-201ENST00000373327 VSTM2AQ8TAG5 236 aa14.6□□□□□ -0.07
TRAF3IP1-201ENST00000373327 MBD3L1Q8WWY6 194 aa14.6□□□□□ -0.07
TRAF3IP1-201ENST00000373327 RNASE7Q9H1E1 156 aaKnown RBP14.6□□□□□ -0.07
TRAF3IP1-201ENST00000373327 MMP23AO75900 390 aa14.6□□□□□ -0.07
TRAF3IP1-201ENST00000373327 Q56UQ5 140 aa14.6□□□□□ -0.07
TRAF3IP1-201ENST00000373327 A0A1B0GUS0 222 aa14.59□□□□□ -0.07
TRAF3IP1-201ENST00000373327 USF1P22415 310 aaPredicted RBP14.59□□□□□ -0.07
TRAF3IP1-201ENST00000373327 IQCJQ1A5X6 159 aa14.59□□□□□ -0.07
TRAF3IP1-201ENST00000373327 HSPB9Q9BQS6 159 aa14.59□□□□□ -0.07
TRAF3IP1-201ENST00000373327 TRBV6-6A0A0A6YYG2 114 aa14.59□□□□□ -0.07
TRAF3IP1-201ENST00000373327 TNFSF13O75888 250 aa14.59□□□□□ -0.07
TRAF3IP1-201ENST00000373327 TMEM106BQ9NUM4 274 aa14.59□□□□□ -0.07
TRAF3IP1-201ENST00000373327 WDR83OSQ9Y284 106 aa14.59□□□□□ -0.07
TRAF3IP1-201ENST00000373327 NCKAP5O14513 1909 aa14.59□□□□□ -0.07
TRAF3IP1-201ENST00000373327 ZNF729A6NN14 1252 aaPredicted RBP14.59□□□□□ -0.07
TRAF3IP1-201ENST00000373327 UBE2CO00762 179 aa14.59□□□□□ -0.07
TRAF3IP1-201ENST00000373327 YPEL1O60688 119 aa14.59□□□□□ -0.07
TRAF3IP1-201ENST00000373327 PYYP10082 97 aa14.59□□□□□ -0.07
TRAF3IP1-201ENST00000373327 RPL27AP46776 148 aaKnown RBP14.59□□□□□ -0.07
TRAF3IP1-201ENST00000373327 TCTAP57738 103 aa14.59□□□□□ -0.07
TRAF3IP1-201ENST00000373327 SRSF7Q16629 238 aaKnown RBP eCLIP14.59□□□□□ -0.07
TRAF3IP1-201ENST00000373327 YPEL2Q96QA6 119 aa14.59□□□□□ -0.07
TRAF3IP1-201ENST00000373327 TBX15Q96SF7 602 aa14.59□□□□□ -0.07
TRAF3IP1-201ENST00000373327 C17orf100A8MU93 164 aa14.58□□□□□ -0.07
TRAF3IP1-201ENST00000373327 PRRX1P54821 245 aa14.58□□□□□ -0.07
TRAF3IP1-201ENST00000373327 OCC1Q8TAD7 63 aa14.58□□□□□ -0.07
TRAF3IP1-201ENST00000373327 PGPA6NDG6 321 aa14.58□□□□□ -0.08
TRAF3IP1-201ENST00000373327 IGHG3P01860 377 aa14.58□□□□□ -0.08
TRAF3IP1-201ENST00000373327 PYY3Q5JQD4 70 aa14.58□□□□□ -0.08
TRAF3IP1-201ENST00000373327 GGTLC1Q9BX51 225 aa14.58□□□□□ -0.08
TRAF3IP1-201ENST00000373327 C10orf91Q5T1B1 145 aa14.58□□□□□ -0.08
TRAF3IP1-201ENST00000373327 FBXL15Q9H469 300 aa14.58□□□□□ -0.08
TRAF3IP1-201ENST00000373327 FAM57AQ8TBR7 257 aa14.58□□□□□ -0.08
TRAF3IP1-201ENST00000373327 MRPL18Q9H0U6 180 aaKnown RBP14.58□□□□□ -0.08
TRAF3IP1-201ENST00000373327 TNFRSF19Q9NS68 423 aa14.58□□□□□ -0.08
TRAF3IP1-201ENST00000373327 TLN2Q9Y4G6 2542 aa14.57□□□□□ -0.08
TRAF3IP1-201ENST00000373327 SETD2Q9BYW2 2564 aaPredicted RBP14.57□□□□□ -0.08
TRAF3IP1-201ENST00000373327 IBA57Q5T440 356 aaKnown RBP14.57□□□□□ -0.08
TRAF3IP1-201ENST00000373327 SPRY4Q9C004 299 aa14.57□□□□□ -0.08
TRAF3IP1-201ENST00000373327 EFNB3Q15768 340 aa14.57□□□□□ -0.08
TRAF3IP1-201ENST00000373327 HLA-DRB5Q30154 266 aa14.57□□□□□ -0.08
TRAF3IP1-201ENST00000373327 ATOH7Q8N100 152 aa14.57□□□□□ -0.08
TRAF3IP1-201ENST00000373327 MGST2Q99735 147 aa14.57□□□□□ -0.08
TRAF3IP1-201ENST00000373327 VAMP8Q9BV40 100 aa14.57□□□□□ -0.08
TRAF3IP1-201ENST00000373327 CEACAM1P13688 526 aa14.57□□□□□ -0.08
TRAF3IP1-201ENST00000373327 C11orf53Q8IXP5 236 aa14.57□□□□□ -0.08
TRAF3IP1-201ENST00000373327 MMD2Q8IY49 270 aa14.57□□□□□ -0.08
TRAF3IP1-201ENST00000373327 PNKDQ8N490 385 aa14.57□□□□□ -0.08
TRAF3IP1-201ENST00000373327 IGKV3-7A0A075B6H7 116 aa14.56□□□□□ -0.08
TRAF3IP1-201ENST00000373327 IGHV1-69-2A0A0G2JMI3 117 aa14.56□□□□□ -0.08
TRAF3IP1-201ENST00000373327 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.56□□□□□ -0.08
TRAF3IP1-201ENST00000373327 SEBOXQ9HB31 216 aaPredicted RBP14.56□□□□□ -0.08
TRAF3IP1-201ENST00000373327 A0A087WWC5 75 aa14.56□□□□□ -0.08
TRAF3IP1-201ENST00000373327 C15orf61A6NNL5 157 aa14.56□□□□□ -0.08
TRAF3IP1-201ENST00000373327 PRO3102Q9H379 93 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms