RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 SPATA12Q7Z6I5 190 aa6.32□□□□□ -1.4
BRCA1-201ENST00000352993 FER1L6-AS1Q8NA97 138 aa6.32□□□□□ -1.4
BRCA1-201ENST00000352993 OR1B1Q8NGR6 318 aa6.32□□□□□ -1.4
BRCA1-201ENST00000352993 ST20Q9HBF5 79 aa6.32□□□□□ -1.4
BRCA1-201ENST00000352993 HCFC1P51610 2035 aa6.32□□□□□ -1.4
BRCA1-201ENST00000352993 LAMA1P25391 3075 aa6.32□□□□□ -1.4
BRCA1-201ENST00000352993 IGLV3-12A0A075B6K2 115 aa6.32□□□□□ -1.4
BRCA1-201ENST00000352993 ISLRO14498 428 aa6.32□□□□□ -1.4
BRCA1-201ENST00000352993 HAND1O96004 215 aa6.32□□□□□ -1.4
BRCA1-201ENST00000352993 RFPL3SP0C7P2 107 aa6.32□□□□□ -1.4
BRCA1-201ENST00000352993 HTR1DP28221 377 aa6.32□□□□□ -1.4
BRCA1-201ENST00000352993 TMEM249Q2WGJ8 235 aa6.32□□□□□ -1.4
BRCA1-201ENST00000352993 BPIFA4PQ86YQ2 179 aa6.32□□□□□ -1.4
BRCA1-201ENST00000352993 C5orf30Q96GV9 206 aa6.32□□□□□ -1.4
BRCA1-201ENST00000352993 DUSP13Q9UII6 198 aa6.32□□□□□ -1.4
BRCA1-201ENST00000352993 POLDIP2Q9Y2S7 368 aa6.32□□□□□ -1.4
BRCA1-201ENST00000352993 LY96Q9Y6Y9 160 aa6.32□□□□□ -1.4
BRCA1-201ENST00000352993 TRAV3A0A0B4J244 114 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 IGHV1OR15-9A0A0B4J2B8 117 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 H3BUT2 72 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 GPR183P32249 361 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 TBR1Q16650 682 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 SMIM21Q3B7S5 101 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 C17orf82Q86X59 251 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-201ENST00000352993 TUSC5Q8IXB3 177 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 C11orf52Q96A22 123 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 OR2V2Q96R30 315 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 NABP2Q9BQ15 211 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 OBP2BQ9NPH6 170 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 CHTOPQ9Y3Y2 248 aaKnown RBP6.31□□□□□ -1.4
BRCA1-201ENST00000352993 SVILO95425 2214 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 FAM231BA6NCW3 169 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 C2orf70A6NJV1 201 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 SYS1-DBNDD2H3BUS1 97 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 CD5LO43866 347 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 PSPNO60542 156 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 KRTAP27-1Q3LI81 207 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 FAM71F2Q6NXP2 309 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 COLCA1Q6ZS62 124 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 ZNF826PQ6ZT77 177 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 OR1N2Q8NGR9 330 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 OR52E5Q8NH55 327 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 DCTN5Q9BTE1 182 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 MAP1LC3CQ9BXW4 147 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 C12orf49Q9H741 205 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 HILPDAQ9Y5L2 63 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 TRIOBPQ9H2D6 2365 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 OOEPA6NGQ2 149 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 FBLL1A6NHQ2 334 aaKnown RBP6.31□□□□□ -1.4
BRCA1-201ENST00000352993 HIGD1CA8MV81 97 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 WNT9BO14905 357 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 ZNF138P52744 262 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 BRWD1-AS2P59051 145 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 UBE2L3P68036 154 aaKnown RBP6.31□□□□□ -1.4
BRCA1-201ENST00000352993 PAX2Q02962 417 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 NUP35Q8NFH5 326 aa6.31□□□□□ -1.4
BRCA1-201ENST00000352993 A0A1W2PR77 199 aa6.3□□□□□ -1.4
BRCA1-201ENST00000352993 ZNF503-AS2A6NEH8 195 aa6.3□□□□□ -1.4
BRCA1-201ENST00000352993 MT-CO3P00414 261 aa6.3□□□□□ -1.4
BRCA1-201ENST00000352993 AREGP15514 252 aa6.3□□□□□ -1.4
BRCA1-201ENST00000352993 TAS2R45P59539 299 aa6.3□□□□□ -1.4
BRCA1-201ENST00000352993 PLP1P60201 277 aa6.3□□□□□ -1.4
BRCA1-201ENST00000352993 SAMD13Q5VXD3 122 aa6.3□□□□□ -1.4
BRCA1-201ENST00000352993 PKIBQ9C010 78 aa6.3□□□□□ -1.4
BRCA1-201ENST00000352993 TCF19Q9Y242 345 aa6.3□□□□□ -1.4
BRCA1-201ENST00000352993 SMIM27A0A1W2PRY6 76 aa6.3□□□□□ -1.4
BRCA1-201ENST00000352993 AHRRA9YTQ3 701 aa6.3□□□□□ -1.4
BRCA1-201ENST00000352993 ARF6P62330 175 aa6.3□□□□□ -1.4
BRCA1-201ENST00000352993 PCOLCEQ15113 449 aa6.3□□□□□ -1.4
BRCA1-201ENST00000352993 TMEM108Q6UXF1 575 aa6.3□□□□□ -1.4
BRCA1-201ENST00000352993 TCF24Q7RTU0 167 aa6.3□□□□□ -1.4
BRCA1-201ENST00000352993 GGNQ86UU5 652 aa6.3□□□□□ -1.4
BRCA1-201ENST00000352993 SLC25A45Q8N413 288 aa6.3□□□□□ -1.4
BRCA1-201ENST00000352993 OR4S2Q8NH73 311 aa6.3□□□□□ -1.4
BRCA1-201ENST00000352993 TMEM186Q96B77 213 aa6.3□□□□□ -1.4
BRCA1-201ENST00000352993 POM121L2Q96KW2 1035 aa6.3□□□□□ -1.4
BRCA1-201ENST00000352993 S1PR3Q99500 378 aa6.3□□□□□ -1.4
BRCA1-201ENST00000352993 PROK2Q9HC23 129 aa6.3□□□□□ -1.4
BRCA1-201ENST00000352993 HES4Q9HCC6 221 aa6.3□□□□□ -1.4
BRCA1-201ENST00000352993 GGTLC3B5MD39 225 aa6.3□□□□□ -1.4
BRCA1-201ENST00000352993 SPINT2O43291 252 aa6.3□□□□□ -1.4
BRCA1-201ENST00000352993 GFRA3O60609 400 aa6.3□□□□□ -1.4
BRCA1-201ENST00000352993 P0C879 139 aa6.3□□□□□ -1.4
BRCA1-201ENST00000352993 HIST1H1EP10412 219 aaKnown RBP6.3□□□□□ -1.4
BRCA1-201ENST00000352993 RPS20P60866 119 aaKnown RBP6.3□□□□□ -1.4
BRCA1-201ENST00000352993 HIST1H1AQ02539 215 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-201ENST00000352993 OR1C1Q15619 314 aa6.3□□□□□ -1.4
BRCA1-201ENST00000352993 Q8IYB0 196 aa6.3□□□□□ -1.4
BRCA1-201ENST00000352993 SNRNP40Q96DI7 357 aaKnown RBP6.3□□□□□ -1.4
BRCA1-201ENST00000352993 CHEK1O14757 476 aa6.29□□□□□ -1.4
BRCA1-201ENST00000352993 DNPH1O43598 174 aa6.29□□□□□ -1.4
BRCA1-201ENST00000352993 ARR3P36575 388 aa6.29□□□□□ -1.4
BRCA1-201ENST00000352993 NXPH1P58417 271 aa6.29□□□□□ -1.4
BRCA1-201ENST00000352993 FOXF2Q12947 444 aa6.29□□□□□ -1.4
BRCA1-201ENST00000352993 GDF5OSQ5U4N7 250 aa6.29□□□□□ -1.4
BRCA1-201ENST00000352993 MOB3BQ86TA1 216 aa6.29□□□□□ -1.4
BRCA1-201ENST00000352993 MBNL3Q9NUK0 354 aaKnown RBP6.29□□□□□ -1.4
BRCA1-201ENST00000352993 TMEM140Q9NV12 185 aa6.29□□□□□ -1.4
BRCA1-201ENST00000352993 TNCP24821 2201 aa6.29□□□□□ -1.4
BRCA1-201ENST00000352993 AHCTF1Q8WYP5 2266 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms