RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 LEMD1Q68G75 181 aa5.93□□□□□ -1.46
RAG1-201ENST00000299440 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.93□□□□□ -1.46
RAG1-201ENST00000299440 ELOA3CA0A087WX78 387 aaPredicted RBP5.93□□□□□ -1.46
RAG1-201ENST00000299440 ZNF688P0C7X2 276 aa5.93□□□□□ -1.46
RAG1-201ENST00000299440 IGHV1-8P0DP01 117 aa5.93□□□□□ -1.46
RAG1-201ENST00000299440 GATA3P23771 443 aa5.93□□□□□ -1.46
RAG1-201ENST00000299440 LEPP41159 167 aa5.93□□□□□ -1.46
RAG1-201ENST00000299440 CMC4P56277 68 aaPredicted RBP5.93□□□□□ -1.46
RAG1-201ENST00000299440 TPTE2P1Q5T6R2 138 aa5.93□□□□□ -1.46
RAG1-201ENST00000299440 LYPD2Q6UXB3 125 aa5.93□□□□□ -1.46
RAG1-201ENST00000299440 PRDM13Q9H4Q3 707 aa5.93□□□□□ -1.46
RAG1-201ENST00000299440 DOCK8Q8NF50 2099 aa5.92□□□□□ -1.46
RAG1-201ENST00000299440 SYNJ2BPP57105 145 aa5.92□□□□□ -1.46
RAG1-201ENST00000299440 EFNB1P98172 346 aa5.92□□□□□ -1.46
RAG1-201ENST00000299440 C15orf32Q32M92 178 aa5.92□□□□□ -1.46
RAG1-201ENST00000299440 FBLN7Q53RD9 439 aa5.92□□□□□ -1.46
RAG1-201ENST00000299440 LINC01590Q5TEZ4 76 aa5.92□□□□□ -1.46
RAG1-201ENST00000299440 NOTCH2Q04721 2471 aa5.92□□□□□ -1.46
RAG1-201ENST00000299440 MTCL1Q9Y4B5 1905 aaKnown RBP5.92□□□□□ -1.46
RAG1-201ENST00000299440 RPL29P47914 159 aaKnown RBP5.92□□□□□ -1.46
RAG1-201ENST00000299440 PQLC2Q6ZP29 291 aa5.92□□□□□ -1.46
RAG1-201ENST00000299440 LURAP1LQ8IV03 231 aa5.92□□□□□ -1.46
RAG1-201ENST00000299440 MAP1LC3CQ9BXW4 147 aa5.92□□□□□ -1.46
RAG1-201ENST00000299440 NPIPB9F8W1W9 429 aa5.92□□□□□ -1.46
RAG1-201ENST00000299440 K7EM74 188 aa5.92□□□□□ -1.46
RAG1-201ENST00000299440 PITX3O75364 302 aa5.92□□□□□ -1.46
RAG1-201ENST00000299440 NDUFB4O95168 129 aa5.92□□□□□ -1.46
RAG1-201ENST00000299440 ARL14EPLP0DKL9 152 aa5.92□□□□□ -1.46
RAG1-201ENST00000299440 FOXB2Q5VYV0 432 aa5.92□□□□□ -1.46
RAG1-201ENST00000299440 TMEM42Q69YG0 159 aa5.92□□□□□ -1.46
RAG1-201ENST00000299440 SLIRPQ9GZT3 109 aaKnown RBP5.92□□□□□ -1.46
RAG1-201ENST00000299440 TGOLN2O43493 480 aa5.92□□□□□ -1.46
RAG1-201ENST00000299440 NPIPB7O75200 414 aa5.92□□□□□ -1.46
RAG1-201ENST00000299440 IBA57Q5T440 356 aaKnown RBP5.92□□□□□ -1.46
RAG1-201ENST00000299440 FAM208BQ5VWN6 2430 aa5.92□□□□□ -1.46
RAG1-201ENST00000299440 GRIFINA4D1Z8 144 aa5.92□□□□□ -1.46
RAG1-201ENST00000299440 CTDSPLO15194 276 aa5.92□□□□□ -1.46
RAG1-201ENST00000299440 RPS20P60866 119 aaKnown RBP5.92□□□□□ -1.46
RAG1-201ENST00000299440 VAX1Q5SQQ9 334 aa5.92□□□□□ -1.46
RAG1-201ENST00000299440 MINOS1Q5TGZ0 78 aa5.92□□□□□ -1.46
RAG1-201ENST00000299440 TEX261Q6UWH6 196 aa5.92□□□□□ -1.46
RAG1-201ENST00000299440 TMEM252Q8N6L7 170 aa5.92□□□□□ -1.46
RAG1-201ENST00000299440 MINOS1-NBL1R4GNA1 71 aa5.92□□□□□ -1.46
RAG1-201ENST00000299440 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.91□□□□□ -1.46
RAG1-201ENST00000299440 EREGO14944 169 aa5.91□□□□□ -1.46
RAG1-201ENST00000299440 HOXA3O43365 443 aaPredicted RBP5.91□□□□□ -1.46
RAG1-201ENST00000299440 GATA2P23769 480 aaPredicted RBP5.91□□□□□ -1.46
RAG1-201ENST00000299440 NDPQ00604 133 aa5.91□□□□□ -1.46
RAG1-201ENST00000299440 THSD7BQ9C0I4 1608 aa5.91□□□□□ -1.46
RAG1-201ENST00000299440 PQLC2LA1A4F0 135 aa5.91□□□□□ -1.46
RAG1-201ENST00000299440 CRYBB3P26998 211 aa5.91□□□□□ -1.46
RAG1-201ENST00000299440 CCKARP32238 428 aa5.91□□□□□ -1.46
RAG1-201ENST00000299440 HNRNPA3P51991 378 aaKnown RBP5.91□□□□□ -1.46
RAG1-201ENST00000299440 ZNF600Q6ZNG1 722 aa5.91□□□□□ -1.46
RAG1-201ENST00000299440 TRBV20OR9-2A0A075B6H5 130 aa5.91□□□□□ -1.46
RAG1-201ENST00000299440 CGB7P0DN87 165 aa5.91□□□□□ -1.46
RAG1-201ENST00000299440 GRNP28799 593 aaKnown RBP5.91□□□□□ -1.46
RAG1-201ENST00000299440 DEFA6Q01524 100 aa5.91□□□□□ -1.46
RAG1-201ENST00000299440 C1orf100Q5SVJ3 147 aa5.91□□□□□ -1.46
RAG1-201ENST00000299440 KLHDC1Q8N7A1 406 aa5.91□□□□□ -1.46
RAG1-201ENST00000299440 CADP27708 2225 aa5.91□□□□□ -1.46
RAG1-201ENST00000299440 IGLV3-32A0A0A0MS00 114 aa5.91□□□□□ -1.46
RAG1-201ENST00000299440 TRGV1A0A0A0MS02 117 aa5.91□□□□□ -1.46
RAG1-201ENST00000299440 IGFBP2P18065 325 aa5.91□□□□□ -1.46
RAG1-201ENST00000299440 RPS11P62280 158 aaKnown RBP eCLIP5.91□□□□□ -1.46
RAG1-201ENST00000299440 IGFL3Q6UXB1 125 aa5.91□□□□□ -1.46
RAG1-201ENST00000299440 VAMP8Q9BV40 100 aa5.91□□□□□ -1.46
RAG1-201ENST00000299440 C8orf82Q6P1X6 216 aaPredicted RBP5.91□□□□□ -1.46
RAG1-201ENST00000299440 OR11H4Q8NGC9 324 aa5.91□□□□□ -1.46
RAG1-201ENST00000299440 TAF15Q92804 592 aaKnown RBP eCLIP5.91□□□□□ -1.46
RAG1-201ENST00000299440 ROS1P08922 2347 aa5.91□□□□□ -1.46
RAG1-201ENST00000299440 IGHV1-3A0A0C4DH29 117 aa5.9□□□□□ -1.46
RAG1-201ENST00000299440 M0R1W7 72 aa5.9□□□□□ -1.46
RAG1-201ENST00000299440 VAMP3Q15836 100 aa5.9□□□□□ -1.46
RAG1-201ENST00000299440 MORN2Q502X0 79 aa5.9□□□□□ -1.46
RAG1-201ENST00000299440 OR10J3Q5JRS4 329 aa5.9□□□□□ -1.46
RAG1-201ENST00000299440 ZFC3H1O60293 1989 aaKnown RBP5.9□□□□□ -1.46
RAG1-201ENST00000299440 IGHV3-73A0A0B4J1V6 119 aa5.9□□□□□ -1.46
RAG1-201ENST00000299440 RAG2P55895 527 aa5.9□□□□□ -1.46
RAG1-201ENST00000299440 KLF17Q5JT82 389 aaPredicted RBP5.9□□□□□ -1.46
RAG1-201ENST00000299440 MCRIP2Q9BUT9 160 aaKnown RBP5.9□□□□□ -1.46
RAG1-201ENST00000299440 MAP1LC3AQ9H492 121 aa5.9□□□□□ -1.46
RAG1-201ENST00000299440 B4DEV8 164 aa5.9□□□□□ -1.46
RAG1-201ENST00000299440 H3BVH4 76 aa5.9□□□□□ -1.46
RAG1-201ENST00000299440 MMP9P14780 707 aa5.9□□□□□ -1.46
RAG1-201ENST00000299440 SAPCD1Q5SSQ6 148 aa5.9□□□□□ -1.46
RAG1-201ENST00000299440 SIGLEC15Q6ZMC9 328 aa5.9□□□□□ -1.46
RAG1-201ENST00000299440 ZNF680Q8NEM1 530 aa5.9□□□□□ -1.46
RAG1-201ENST00000299440 NABP1Q96AH0 204 aa5.9□□□□□ -1.46
RAG1-201ENST00000299440 ST6GAL2Q96JF0 529 aa5.9□□□□□ -1.46
RAG1-201ENST00000299440 C11orf68Q9H3H3 251 aaKnown RBP5.9□□□□□ -1.46
RAG1-201ENST00000299440 GSX1Q9H4S2 264 aaPredicted RBP5.9□□□□□ -1.46
RAG1-201ENST00000299440 SBF1O95248 1867 aa5.9□□□□□ -1.47
RAG1-201ENST00000299440 EFNA2O43921 213 aa5.9□□□□□ -1.47
RAG1-201ENST00000299440 LGALS3P17931 250 aaKnown RBP5.9□□□□□ -1.47
RAG1-201ENST00000299440 NMUP48645 174 aa5.9□□□□□ -1.47
RAG1-201ENST00000299440 GCSAMLQ5JQS6 135 aa5.9□□□□□ -1.47
RAG1-201ENST00000299440 DTX1Q86Y01 620 aa5.9□□□□□ -1.47
RAG1-201ENST00000299440 TMEM158Q8WZ71 300 aa5.9□□□□□ -1.47
RAG1-201ENST00000299440 TTC28Q96AY4 2481 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms