RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 MAS1LP35410 378 aa23.41■■□□□ 1.34
CTDNEP1-208ENST00000573600 UBE2E1P51965 193 aa23.41■■□□□ 1.34
CTDNEP1-208ENST00000573600 CFHR4Q92496 578 aa23.41■■□□□ 1.34
CTDNEP1-208ENST00000573600 TBX15Q96SF7 602 aa23.41■■□□□ 1.34
CTDNEP1-208ENST00000573600 VENTXO95231 258 aa23.4■■□□□ 1.34
CTDNEP1-208ENST00000573600 C2orf83Q53S99 150 aa23.4■■□□□ 1.34
CTDNEP1-208ENST00000573600 SIGLEC9Q9Y336 463 aa23.4■■□□□ 1.34
CTDNEP1-208ENST00000573600 PRSS8Q16651 343 aa23.39■■□□□ 1.34
CTDNEP1-208ENST00000573600 BSXQ3C1V8 233 aa23.39■■□□□ 1.34
CTDNEP1-208ENST00000573600 WDR83OSQ9Y284 106 aa23.39■■□□□ 1.34
CTDNEP1-208ENST00000573600 TNCP24821 2201 aa23.39■■□□□ 1.33
CTDNEP1-208ENST00000573600 IGHV4-30-2A0A087WSY4 118 aa23.39■■□□□ 1.33
CTDNEP1-208ENST00000573600 A0A1W2PRD5 423 aa23.39■■□□□ 1.33
CTDNEP1-208ENST00000573600 A0A1W2PRF3 423 aa23.39■■□□□ 1.33
CTDNEP1-208ENST00000573600 A0A1W2PRM7 423 aa23.39■■□□□ 1.33
CTDNEP1-208ENST00000573600 C17orf112F2Z3M2 114 aa23.39■■□□□ 1.33
CTDNEP1-208ENST00000573600 SNCAP37840 140 aa23.39■■□□□ 1.33
CTDNEP1-208ENST00000573600 MRGPRG-AS1Q2M3A8 158 aa23.39■■□□□ 1.33
CTDNEP1-208ENST00000573600 TPSG1Q9NRR2 321 aa23.39■■□□□ 1.33
CTDNEP1-208ENST00000573600 METTL1Q9UBP6 276 aaKnown RBP23.39■■□□□ 1.33
CTDNEP1-208ENST00000573600 MPDU1O75352 247 aa23.38■■□□□ 1.33
CTDNEP1-208ENST00000573600 CNTFRP26992 372 aa23.38■■□□□ 1.33
CTDNEP1-208ENST00000573600 MRPL41Q8IXM3 137 aaKnown RBP23.38■■□□□ 1.33
CTDNEP1-208ENST00000573600 ZNF709Q8N972 641 aa23.38■■□□□ 1.33
CTDNEP1-208ENST00000573600 LFNGQ8NES3 379 aa23.38■■□□□ 1.33
CTDNEP1-208ENST00000573600 NRGNQ92686 78 aa23.38■■□□□ 1.33
CTDNEP1-208ENST00000573600 LPAR2Q9HBW0 351 aa23.38■■□□□ 1.33
CTDNEP1-208ENST00000573600 ACTL6BO94805 426 aa23.37■■□□□ 1.33
CTDNEP1-208ENST00000573600 ZNF787Q6DD87 383 aa23.37■■□□□ 1.33
CTDNEP1-208ENST00000573600 PPP1R27Q86WC6 154 aa23.37■■□□□ 1.33
CTDNEP1-208ENST00000573600 OR10W1Q8NGF6 305 aa23.37■■□□□ 1.33
CTDNEP1-208ENST00000573600 NPCDR1Q9BY65 106 aa23.37■■□□□ 1.33
CTDNEP1-208ENST00000573600 FNDC10F2Z333 226 aa23.36■■□□□ 1.33
CTDNEP1-208ENST00000573600 H2AFB1P0C5Y9 115 aa23.36■■□□□ 1.33
CTDNEP1-208ENST00000573600 RNASE2P10153 161 aaKnown RBP23.36■■□□□ 1.33
CTDNEP1-208ENST00000573600 SSX2Q16385 188 aa23.36■■□□□ 1.33
CTDNEP1-208ENST00000573600 LINC00052Q96N35 136 aa23.36■■□□□ 1.33
CTDNEP1-208ENST00000573600 SOX15O60248 233 aa23.36■■□□□ 1.33
CTDNEP1-208ENST00000573600 MOSP00540 346 aa23.36■■□□□ 1.33
CTDNEP1-208ENST00000573600 PAX8Q06710 450 aa23.36■■□□□ 1.33
CTDNEP1-208ENST00000573600 TUSC1Q2TAM9 212 aa23.36■■□□□ 1.33
CTDNEP1-208ENST00000573600 TMEM41BQ5BJD5 291 aa23.36■■□□□ 1.33
CTDNEP1-208ENST00000573600 NPVFQ9HCQ7 196 aa23.36■■□□□ 1.33
CTDNEP1-208ENST00000573600 COL12A1Q99715 3063 aa23.35■■□□□ 1.33
CTDNEP1-208ENST00000573600 SMCO3A2RU48 225 aa23.35■■□□□ 1.33
CTDNEP1-208ENST00000573600 BTBD17A6NE02 478 aa23.35■■□□□ 1.33
CTDNEP1-208ENST00000573600 CGB1A6NKQ9 187 aa23.35■■□□□ 1.33
CTDNEP1-208ENST00000573600 E7EUB6 86 aa23.35■■□□□ 1.33
CTDNEP1-208ENST00000573600 BPIFCQ8NFQ6 507 aa23.35■■□□□ 1.33
CTDNEP1-208ENST00000573600 MALSU1Q96EH3 234 aa23.35■■□□□ 1.33
CTDNEP1-208ENST00000573600 IGKV1D-33P01593 117 aa23.34■■□□□ 1.33
CTDNEP1-208ENST00000573600 IGKV1-33P01594 117 aa23.34■■□□□ 1.33
CTDNEP1-208ENST00000573600 MBP02144 154 aa23.34■■□□□ 1.33
CTDNEP1-208ENST00000573600 SLC25A16P16260 332 aa23.34■■□□□ 1.33
CTDNEP1-208ENST00000573600 RPL27AP46776 148 aaKnown RBP23.34■■□□□ 1.33
CTDNEP1-208ENST00000573600 RAB2AP61019 212 aa23.34■■□□□ 1.33
CTDNEP1-208ENST00000573600 TNXAQ16473 311 aa23.34■■□□□ 1.33
CTDNEP1-208ENST00000573600 TREML4Q6UXN2 200 aa23.34■■□□□ 1.33
CTDNEP1-208ENST00000573600 RPRMQ9NS64 109 aa23.34■■□□□ 1.33
CTDNEP1-208ENST00000573600 HBE1P02100 147 aa23.33■■□□□ 1.33
CTDNEP1-208ENST00000573600 SUB1P53999 127 aaKnown RBP eCLIP23.33■■□□□ 1.33
CTDNEP1-208ENST00000573600 C10orf55Q5SWW7 151 aa23.33■■□□□ 1.33
CTDNEP1-208ENST00000573600 NPBQ8NG41 125 aa23.33■■□□□ 1.33
CTDNEP1-208ENST00000573600 OR2T10Q8NGZ9 312 aa23.33■■□□□ 1.33
CTDNEP1-208ENST00000573600 AGPAT2O15120 278 aa23.33■■□□□ 1.32
CTDNEP1-208ENST00000573600 COMPP49747 757 aaPredicted RBP23.33■■□□□ 1.32
CTDNEP1-208ENST00000573600 FBXL15Q9H469 300 aa23.33■■□□□ 1.32
CTDNEP1-208ENST00000573600 FAM208BQ5VWN6 2430 aa23.32■■□□□ 1.32
CTDNEP1-208ENST00000573600 NBR2O15453 112 aa23.32■■□□□ 1.32
CTDNEP1-208ENST00000573600 WT1-ASQ06250 92 aa23.32■■□□□ 1.32
CTDNEP1-208ENST00000573600 PLGLAQ15195 96 aa23.32■■□□□ 1.32
CTDNEP1-208ENST00000573600 MMDQ15546 238 aa23.32■■□□□ 1.32
CTDNEP1-208ENST00000573600 EAF1Q96JC9 268 aaPredicted RBP23.32■■□□□ 1.32
CTDNEP1-208ENST00000573600 KIAA1456Q9P272 454 aa23.32■■□□□ 1.32
CTDNEP1-208ENST00000573600 CLEC12BQ2HXU8 276 aa23.31■■□□□ 1.32
CTDNEP1-208ENST00000573600 ARSJQ5FYB0 599 aaPredicted RBP23.31■■□□□ 1.32
CTDNEP1-208ENST00000573600 DYNAPQ8N1N2 210 aa23.31■■□□□ 1.32
CTDNEP1-208ENST00000573600 NARS2Q96I59 477 aaKnown RBP23.31■■□□□ 1.32
CTDNEP1-208ENST00000573600 VSIRQ9H7M9 311 aa23.31■■□□□ 1.32
CTDNEP1-208ENST00000573600 TREM1Q9NP99 234 aa23.31■■□□□ 1.32
CTDNEP1-208ENST00000573600 A0A1B0GW64 132 aa23.3■■□□□ 1.32
CTDNEP1-208ENST00000573600 NDUFA3O95167 84 aa23.3■■□□□ 1.32
CTDNEP1-208ENST00000573600 SNRNP70P08621 437 aaKnown RBP23.3■■□□□ 1.32
CTDNEP1-208ENST00000573600 PLA2G2AP14555 144 aa23.3■■□□□ 1.32
CTDNEP1-208ENST00000573600 ELLP55199 621 aaPredicted RBP23.3■■□□□ 1.32
CTDNEP1-208ENST00000573600 SPSB3Q6PJ21 355 aa23.3■■□□□ 1.32
CTDNEP1-208ENST00000573600 TRAV1-1A0A0B4J248 108 aa23.3■■□□□ 1.32
CTDNEP1-208ENST00000573600 J3QKU1 62 aa23.3■■□□□ 1.32
CTDNEP1-208ENST00000573600 OR13C7P0DN81 318 aa23.3■■□□□ 1.32
CTDNEP1-208ENST00000573600 SRSF3P84103 164 aaKnown RBP23.3■■□□□ 1.32
CTDNEP1-208ENST00000573600 EBI3Q14213 229 aa23.3■■□□□ 1.32
CTDNEP1-208ENST00000573600 HES1Q14469 280 aa23.3■■□□□ 1.32
CTDNEP1-208ENST00000573600 SFT2D1Q8WV19 159 aa23.3■■□□□ 1.32
CTDNEP1-208ENST00000573600 PBDC1Q9BVG4 233 aa23.3■■□□□ 1.32
CTDNEP1-208ENST00000573600 LSM4Q9Y4Z0 139 aaKnown RBP23.3■■□□□ 1.32
CTDNEP1-208ENST00000573600 TMEM218A2RU14 115 aa23.29■■□□□ 1.32
CTDNEP1-208ENST00000573600 CD5P06127 495 aa23.29■■□□□ 1.32
CTDNEP1-208ENST00000573600 COL8A1P27658 744 aa23.29■■□□□ 1.32
CTDNEP1-208ENST00000573600 HNF4GQ14541 408 aa23.29■■□□□ 1.32
CTDNEP1-208ENST00000573600 FFAR4Q5NUL3 377 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms