RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 VDAC2P45880 294 aaPredicted RBP4.6□□□□□ -1.67
ABCF1-207ENST00000542772 ATP5IP56385 69 aaPredicted RBP4.6□□□□□ -1.67
ABCF1-207ENST00000542772 H2BFSP57053 126 aa4.6□□□□□ -1.67
ABCF1-207ENST00000542772 RRAS2P62070 204 aaPredicted RBP4.6□□□□□ -1.67
ABCF1-207ENST00000542772 CYCSP99999 105 aaKnown RBP4.6□□□□□ -1.67
ABCF1-207ENST00000542772 SRSF2Q01130 221 aaKnown RBP4.6□□□□□ -1.67
ABCF1-207ENST00000542772 WT1-ASQ06250 92 aa4.6□□□□□ -1.67
ABCF1-207ENST00000542772 TNFRSF9Q07011 255 aa4.6□□□□□ -1.67
ABCF1-207ENST00000542772 KIAA0141Q14154 515 aaPredicted RBP4.6□□□□□ -1.67
ABCF1-207ENST00000542772 BSXQ3C1V8 233 aa4.6□□□□□ -1.67
ABCF1-207ENST00000542772 KRTAP21-3Q3LHN1 58 aa4.6□□□□□ -1.67
ABCF1-207ENST00000542772 KRTAP24-1Q3LI83 254 aa4.6□□□□□ -1.67
ABCF1-207ENST00000542772 CXorf66Q5JRM2 361 aaPredicted RBP4.6□□□□□ -1.67
ABCF1-207ENST00000542772 GSG1LQ6UXU4 331 aa4.6□□□□□ -1.67
ABCF1-207ENST00000542772 COMMD1Q8N668 190 aa4.6□□□□□ -1.67
ABCF1-207ENST00000542772 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.6□□□□□ -1.67
ABCF1-207ENST00000542772 ZBTB8BQ8NAP8 495 aaPredicted RBP4.6□□□□□ -1.67
ABCF1-207ENST00000542772 UXS1Q8NBZ7 420 aa4.6□□□□□ -1.67
ABCF1-207ENST00000542772 OR11H7Q8NGC8 314 aa4.6□□□□□ -1.67
ABCF1-207ENST00000542772 OR10W1Q8NGF6 305 aa4.6□□□□□ -1.67
ABCF1-207ENST00000542772 OR5M8Q8NGP6 311 aa4.6□□□□□ -1.67
ABCF1-207ENST00000542772 WFDC12Q8WWY7 111 aa4.6□□□□□ -1.67
ABCF1-207ENST00000542772 ASB13Q8WXK3 278 aa4.6□□□□□ -1.67
ABCF1-207ENST00000542772 ARPC1AQ92747 370 aa4.6□□□□□ -1.67
ABCF1-207ENST00000542772 TAF15Q92804 592 aaKnown RBP eCLIP4.6□□□□□ -1.67
ABCF1-207ENST00000542772 PPP1R14BQ96C90 147 aa4.6□□□□□ -1.67
ABCF1-207ENST00000542772 FYTTD1Q96QD9 318 aaKnown RBP4.6□□□□□ -1.67
ABCF1-207ENST00000542772 FAM103A1Q9BTL3 118 aaKnown RBP4.6□□□□□ -1.67
ABCF1-207ENST00000542772 NMES1Q9C002 83 aa4.6□□□□□ -1.67
ABCF1-207ENST00000542772 C11orf1Q9H5F2 150 aa4.6□□□□□ -1.67
ABCF1-207ENST00000542772 RNF114Q9Y508 228 aa4.6□□□□□ -1.67
ABCF1-207ENST00000542772 C13orf42A0A1B0GVH6 325 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 A0A1W2PN81 502 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 G3V318 75 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 H3BUA1 57 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 CCSO14618 274 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 SYNGR2O43760 224 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 SSNA1O43805 119 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 SOX15O60248 233 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 MED6O75586 246 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 IFNA17P01571 189 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 MBPP02686 304 aaPredicted RBP4.59□□□□□ -1.67
ABCF1-207ENST00000542772 OPN1MWP04001 364 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 ELANEP08246 267 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 OPN1MW2P0DN77 364 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 OPN1MW3P0DN78 364 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 MDKP21741 143 aaPredicted RBP4.59□□□□□ -1.67
ABCF1-207ENST00000542772 PSMB8P28062 276 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 PSMB6P28072 239 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 CHRNA7P36544 502 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 PAX9P55771 341 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 TAS2R30P59541 319 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 ERHP84090 104 aaKnown RBP4.59□□□□□ -1.67
ABCF1-207ENST00000542772 CD83Q01151 205 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 FCN2Q15485 313 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 IAH1Q2TAA2 248 aaPredicted RBP4.59□□□□□ -1.67
ABCF1-207ENST00000542772 C2CD3Q4AC94 2353 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 C9orf152Q5JTZ5 239 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 C10orf55Q5SWW7 151 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 TEX38Q6PEX7 206 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 UNQ5815/PRO19632Q6UWF5 114 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 CENPVQ7Z7K6 275 aaPredicted RBP4.59□□□□□ -1.67
ABCF1-207ENST00000542772 OR2C3Q8N628 320 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 ZNF114Q8NC26 417 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 OR1L6Q8NGR2 347 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 OR1S1Q8NH92 325 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 FAM110DQ8TAY7 271 aaPredicted RBP4.59□□□□□ -1.67
ABCF1-207ENST00000542772 MYOZ3Q8TDC0 251 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 TMEM158Q8WZ71 300 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 WDR89Q96FK6 387 aaPredicted RBP4.59□□□□□ -1.67
ABCF1-207ENST00000542772 SMIM8Q96KF7 97 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 NOL4LQ96MY1 436 aaPredicted RBP4.59□□□□□ -1.67
ABCF1-207ENST00000542772 FANCD2OSQ96PS1 177 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 MED28Q9H204 178 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 RBKSQ9H477 322 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 ZFP57Q9NU63 452 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 WSB1Q9Y6I7 421 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 U3KQ87 197 aa4.59□□□□□ -1.67
ABCF1-207ENST00000542772 PSMB11A5LHX3 300 aa4.58□□□□□ -1.68
ABCF1-207ENST00000542772 C5orf51A6NDU8 294 aa4.58□□□□□ -1.68
ABCF1-207ENST00000542772 GOSR2O14653 212 aa4.58□□□□□ -1.68
ABCF1-207ENST00000542772 PFDN1O60925 122 aa4.58□□□□□ -1.68
ABCF1-207ENST00000542772 FBXO24O75426 580 aa4.58□□□□□ -1.68
ABCF1-207ENST00000542772 RBMXL2O75526 392 aaKnown RBP4.58□□□□□ -1.68
ABCF1-207ENST00000542772 SIX6O95475 246 aa4.58□□□□□ -1.68
ABCF1-207ENST00000542772 TMEM50AO95807 157 aa4.58□□□□□ -1.68
ABCF1-207ENST00000542772 OR13C7P0DN81 318 aa4.58□□□□□ -1.68
ABCF1-207ENST00000542772 RNASE2P10153 161 aaKnown RBP4.58□□□□□ -1.68
ABCF1-207ENST00000542772 LYL1P12980 280 aa4.58□□□□□ -1.68
ABCF1-207ENST00000542772 AREGP15514 252 aa4.58□□□□□ -1.68
ABCF1-207ENST00000542772 HIST1H1BP16401 226 aaKnown RBP4.58□□□□□ -1.68
ABCF1-207ENST00000542772 HTR2BP41595 481 aa4.58□□□□□ -1.68
ABCF1-207ENST00000542772 NKX2-1P43699 371 aaPredicted RBP4.58□□□□□ -1.68
ABCF1-207ENST00000542772 RAB9AP51151 201 aa4.58□□□□□ -1.68
ABCF1-207ENST00000542772 RIPPLY3P57055 190 aa4.58□□□□□ -1.68
ABCF1-207ENST00000542772 KRTAP10-3P60369 221 aa4.58□□□□□ -1.68
ABCF1-207ENST00000542772 POLR2GP62487 172 aaKnown RBP eCLIP4.58□□□□□ -1.68
ABCF1-207ENST00000542772 GNB1P62873 340 aa4.58□□□□□ -1.68
ABCF1-207ENST00000542772 SLC35B1P78383 322 aa4.58□□□□□ -1.68
ABCF1-207ENST00000542772 FOXE3Q13461 319 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms