RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 CGB3P0DN86 165 aa13.6□□□□□ -0.23
PCDHGA11-202ENST00000518882 CGB7P0DN87 165 aa13.6□□□□□ -0.23
PCDHGA11-202ENST00000518882 LGALS4P56470 323 aa13.6□□□□□ -0.23
PCDHGA11-202ENST00000518882 DUX4L9Q6RFH8 374 aaPredicted RBP13.6□□□□□ -0.23
PCDHGA11-202ENST00000518882 MOGAT3Q86VF5 341 aa13.6□□□□□ -0.23
PCDHGA11-202ENST00000518882 OR2V2Q96R30 315 aa13.6□□□□□ -0.23
PCDHGA11-202ENST00000518882 TMEM106BQ9NUM4 274 aa13.6□□□□□ -0.23
PCDHGA11-202ENST00000518882 IDI2-AS1Q9NZ38 188 aa13.6□□□□□ -0.23
PCDHGA11-202ENST00000518882 FOXA2Q9Y261 457 aaPredicted RBP13.6□□□□□ -0.23
PCDHGA11-202ENST00000518882 TRGV10A0A0A0MS01 117 aa13.59□□□□□ -0.23
PCDHGA11-202ENST00000518882 C9JCJ5 164 aa13.59□□□□□ -0.23
PCDHGA11-202ENST00000518882 NKX2-8O15522 239 aa13.59□□□□□ -0.23
PCDHGA11-202ENST00000518882 TNFSF13O75888 250 aa13.59□□□□□ -0.23
PCDHGA11-202ENST00000518882 LINC00869P0C866 280 aa13.59□□□□□ -0.23
PCDHGA11-202ENST00000518882 SP9P0CG40 484 aa13.59□□□□□ -0.23
PCDHGA11-202ENST00000518882 KIR2DS2P43631 304 aa13.59□□□□□ -0.23
PCDHGA11-202ENST00000518882 HSPE1P61604 102 aaKnown RBP13.59□□□□□ -0.23
PCDHGA11-202ENST00000518882 PLA2G2CQ5R387 149 aa13.59□□□□□ -0.23
PCDHGA11-202ENST00000518882 MOB3BQ86TA1 216 aa13.59□□□□□ -0.23
PCDHGA11-202ENST00000518882 OR1L6Q8NGR2 347 aa13.59□□□□□ -0.23
PCDHGA11-202ENST00000518882 ZNF71Q9NQZ8 489 aaPredicted RBP13.59□□□□□ -0.23
PCDHGA11-202ENST00000518882 PLSCR4Q9NRQ2 329 aa13.59□□□□□ -0.23
PCDHGA11-202ENST00000518882 V9GYV3 84 aa13.59□□□□□ -0.23
PCDHGA11-202ENST00000518882 CRISP2P16562 243 aa13.59□□□□□ -0.23
PCDHGA11-202ENST00000518882 CDKN1AP38936 164 aa13.59□□□□□ -0.23
PCDHGA11-202ENST00000518882 IER3P46695 156 aa13.59□□□□□ -0.23
PCDHGA11-202ENST00000518882 PPP1R35Q8TAP8 253 aa13.59□□□□□ -0.23
PCDHGA11-202ENST00000518882 FAM216AQ8WUB2 273 aa13.59□□□□□ -0.23
PCDHGA11-202ENST00000518882 NEUROG1Q92886 237 aa13.59□□□□□ -0.23
PCDHGA11-202ENST00000518882 HINT2Q9BX68 163 aa13.59□□□□□ -0.23
PCDHGA11-202ENST00000518882 PRR33A8MZF0 331 aa13.58□□□□□ -0.24
PCDHGA11-202ENST00000518882 TPTE2P1Q5T6R2 138 aa13.58□□□□□ -0.24
PCDHGA11-202ENST00000518882 TRAV9-1A0A075B6T8 112 aa13.57□□□□□ -0.24
PCDHGA11-202ENST00000518882 FCN1O00602 326 aa13.57□□□□□ -0.24
PCDHGA11-202ENST00000518882 ESDP10768 282 aa13.57□□□□□ -0.24
PCDHGA11-202ENST00000518882 CFHR2P36980 270 aa13.57□□□□□ -0.24
PCDHGA11-202ENST00000518882 MZT1Q08AG7 82 aa13.57□□□□□ -0.24
PCDHGA11-202ENST00000518882 ZNF124Q15973 351 aa13.57□□□□□ -0.24
PCDHGA11-202ENST00000518882 TOMM20LQ6UXN7 152 aa13.57□□□□□ -0.24
PCDHGA11-202ENST00000518882 MMD2Q8IY49 270 aa13.57□□□□□ -0.24
PCDHGA11-202ENST00000518882 STARD4Q96DR4 205 aa13.57□□□□□ -0.24
PCDHGA11-202ENST00000518882 ZNF503Q96F45 646 aa13.57□□□□□ -0.24
PCDHGA11-202ENST00000518882 UHRF2Q96PU4 802 aa13.57□□□□□ -0.24
PCDHGA11-202ENST00000518882 DKK4Q9UBT3 224 aa13.57□□□□□ -0.24
PCDHGA11-202ENST00000518882 IGKV1OR2-108A0A075B7D4 117 aa13.57□□□□□ -0.24
PCDHGA11-202ENST00000518882 M0R143 59 aa13.57□□□□□ -0.24
PCDHGA11-202ENST00000518882 MT-CO2P00403 227 aa13.57□□□□□ -0.24
PCDHGA11-202ENST00000518882 RAB4AP20338 218 aa13.57□□□□□ -0.24
PCDHGA11-202ENST00000518882 TPPP2P59282 170 aa13.57□□□□□ -0.24
PCDHGA11-202ENST00000518882 PSG5Q15238 335 aa13.57□□□□□ -0.24
PCDHGA11-202ENST00000518882 RPEL1Q2QD12 228 aa13.57□□□□□ -0.24
PCDHGA11-202ENST00000518882 BHLHA15Q7RTS1 189 aaPredicted RBP13.57□□□□□ -0.24
PCDHGA11-202ENST00000518882 OR8I2Q8N0Y5 310 aa13.57□□□□□ -0.24
PCDHGA11-202ENST00000518882 HSPB9Q9BQS6 159 aa13.57□□□□□ -0.24
PCDHGA11-202ENST00000518882 SLC25A15Q9Y619 301 aa13.57□□□□□ -0.24
PCDHGA11-202ENST00000518882 LY96Q9Y6Y9 160 aa13.57□□□□□ -0.24
PCDHGA11-202ENST00000518882 PLCE1Q9P212 2302 aa13.57□□□□□ -0.24
PCDHGA11-202ENST00000518882 SNURFLB1AK76 121 aa13.56□□□□□ -0.24
PCDHGA11-202ENST00000518882 LHBP01229 141 aa13.56□□□□□ -0.24
PCDHGA11-202ENST00000518882 AREGP15514 252 aa13.56□□□□□ -0.24
PCDHGA11-202ENST00000518882 GATA2P23769 480 aaPredicted RBP13.56□□□□□ -0.24
PCDHGA11-202ENST00000518882 CRYBB3P26998 211 aa13.56□□□□□ -0.24
PCDHGA11-202ENST00000518882 RAB7AP51149 207 aa13.56□□□□□ -0.24
PCDHGA11-202ENST00000518882 ZNF83P51522 516 aa13.56□□□□□ -0.24
PCDHGA11-202ENST00000518882 RAB31Q13636 194 aa13.56□□□□□ -0.24
PCDHGA11-202ENST00000518882 CENPWQ5EE01 88 aa13.56□□□□□ -0.24
PCDHGA11-202ENST00000518882 DOLPP1Q86YN1 238 aa13.56□□□□□ -0.24
PCDHGA11-202ENST00000518882 LYG1Q8N1E2 194 aa13.56□□□□□ -0.24
PCDHGA11-202ENST00000518882 ST6GALNAC3Q8NDV1 305 aa13.56□□□□□ -0.24
PCDHGA11-202ENST00000518882 LRFN3Q9BTN0 628 aa13.56□□□□□ -0.24
PCDHGA11-202ENST00000518882 ENY2Q9NPA8 101 aa13.56□□□□□ -0.24
PCDHGA11-202ENST00000518882 OR51B2Q9Y5P1 312 aa13.56□□□□□ -0.24
PCDHGA11-202ENST00000518882 A8MXE2 369 aa13.56□□□□□ -0.24
PCDHGA11-202ENST00000518882 SPRY3O43610 288 aa13.56□□□□□ -0.24
PCDHGA11-202ENST00000518882 TDGF1P3P51864 188 aa13.56□□□□□ -0.24
PCDHGA11-202ENST00000518882 PAFAH1B2P68402 229 aa13.56□□□□□ -0.24
PCDHGA11-202ENST00000518882 TEX43Q6ZNM6 134 aa13.56□□□□□ -0.24
PCDHGA11-202ENST00000518882 NABP2Q9BQ15 211 aa13.56□□□□□ -0.24
PCDHGA11-202ENST00000518882 RNASE7Q9H1E1 156 aaKnown RBP13.56□□□□□ -0.24
PCDHGA11-202ENST00000518882 SLC45A2Q9UMX9 530 aa13.56□□□□□ -0.24
PCDHGA11-202ENST00000518882 RNF114Q9Y508 228 aa13.56□□□□□ -0.24
PCDHGA11-202ENST00000518882 LAMA5O15230 3695 aa13.55□□□□□ -0.24
PCDHGA11-202ENST00000518882 KBTBD11-OT1A0A1B0GTJ5 212 aa13.55□□□□□ -0.24
PCDHGA11-202ENST00000518882 SPINK4O60575 86 aa13.55□□□□□ -0.24
PCDHGA11-202ENST00000518882 GNG10P50151 68 aa13.55□□□□□ -0.24
PCDHGA11-202ENST00000518882 MRPS11P82912 194 aaKnown RBP13.55□□□□□ -0.24
PCDHGA11-202ENST00000518882 PQLC2Q6ZP29 291 aa13.55□□□□□ -0.24
PCDHGA11-202ENST00000518882 ITLN1Q8WWA0 313 aa13.55□□□□□ -0.24
PCDHGA11-202ENST00000518882 ZNRD1Q9P1U0 126 aa13.55□□□□□ -0.24
PCDHGA11-202ENST00000518882 ITGB1BP1O14713 200 aa13.55□□□□□ -0.24
PCDHGA11-202ENST00000518882 IGKV1-16P04430 117 aa13.55□□□□□ -0.24
PCDHGA11-202ENST00000518882 GNG4P50150 75 aa13.55□□□□□ -0.24
PCDHGA11-202ENST00000518882 VHLLQ6RSH7 139 aa13.55□□□□□ -0.24
PCDHGA11-202ENST00000518882 BAGE3Q86Y29 109 aa13.55□□□□□ -0.24
PCDHGA11-202ENST00000518882 BAGE2Q86Y30 109 aa13.55□□□□□ -0.24
PCDHGA11-202ENST00000518882 ZNF439Q8NDP4 499 aa13.55□□□□□ -0.24
PCDHGA11-202ENST00000518882 PROCRQ9UNN8 238 aa13.55□□□□□ -0.24
PCDHGA11-202ENST00000518882 ARFGEF3Q5TH69 2177 aa13.55□□□□□ -0.24
PCDHGA11-202ENST00000518882 HELTA6NFD8 242 aa13.54□□□□□ -0.24
PCDHGA11-202ENST00000518882 SRRM4A7MD48 611 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms