RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 CD33P20138 364 aa9.78□□□□□ -0.84
HDAC4-207ENST00000461113 PPIFP30405 207 aaKnown RBP9.78□□□□□ -0.84
HDAC4-207ENST00000461113 RAB9AP51151 201 aa9.78□□□□□ -0.84
HDAC4-207ENST00000461113 MECP2P51608 486 aaKnown RBP9.78□□□□□ -0.84
HDAC4-207ENST00000461113 RPL23AP62750 156 aaKnown RBP9.78□□□□□ -0.84
HDAC4-207ENST00000461113 TMEM268Q5VZI3 342 aa9.78□□□□□ -0.84
HDAC4-207ENST00000461113 C10orf99Q6UWK7 81 aa9.78□□□□□ -0.84
HDAC4-207ENST00000461113 OR5B3Q8NH48 314 aa9.78□□□□□ -0.84
HDAC4-207ENST00000461113 ENKURQ8TC29 256 aa9.78□□□□□ -0.84
HDAC4-207ENST00000461113 GLYATL2Q8WU03 294 aa9.78□□□□□ -0.84
HDAC4-207ENST00000461113 SEC22AQ96IW7 307 aa9.78□□□□□ -0.84
HDAC4-207ENST00000461113 QTRT1Q9BXR0 403 aaKnown RBP9.78□□□□□ -0.84
HDAC4-207ENST00000461113 U3KQK5 164 aa9.78□□□□□ -0.84
HDAC4-207ENST00000461113 A0A0G2JLM5 398 aa9.77□□□□□ -0.85
HDAC4-207ENST00000461113 C13orf42A0A1B0GVH6 325 aa9.77□□□□□ -0.85
HDAC4-207ENST00000461113 IGLV1-40P01703 118 aa9.77□□□□□ -0.85
HDAC4-207ENST00000461113 TRGV3P03979 118 aa9.77□□□□□ -0.85
HDAC4-207ENST00000461113 APELAP0DMC3 54 aa9.77□□□□□ -0.85
HDAC4-207ENST00000461113 PSMB8P28062 276 aa9.77□□□□□ -0.85
HDAC4-207ENST00000461113 TPPP2P59282 170 aa9.77□□□□□ -0.85
HDAC4-207ENST00000461113 CFHR3Q02985 330 aa9.77□□□□□ -0.85
HDAC4-207ENST00000461113 C4orf46Q504U0 113 aa9.77□□□□□ -0.85
HDAC4-207ENST00000461113 RNF152Q8N8N0 203 aa9.77□□□□□ -0.85
HDAC4-207ENST00000461113 WFDC9Q8NEX5 89 aa9.77□□□□□ -0.85
HDAC4-207ENST00000461113 COQ8AQ8NI60 647 aa9.77□□□□□ -0.85
HDAC4-207ENST00000461113 ENY2Q9NPA8 101 aa9.77□□□□□ -0.85
HDAC4-207ENST00000461113 ZNF257Q9Y2Q1 563 aa9.77□□□□□ -0.85
HDAC4-207ENST00000461113 NSG2Q9Y328 171 aa9.77□□□□□ -0.85
HDAC4-207ENST00000461113 FBXO7Q9Y3I1 522 aa9.77□□□□□ -0.85
HDAC4-207ENST00000461113 TRAV3A0A0B4J244 114 aa9.76□□□□□ -0.85
HDAC4-207ENST00000461113 DUXBA0A1W2PPF3 345 aa9.76□□□□□ -0.85
HDAC4-207ENST00000461113 C15orf61A6NNL5 157 aa9.76□□□□□ -0.85
HDAC4-207ENST00000461113 PLA2G10O15496 165 aa9.76□□□□□ -0.85
HDAC4-207ENST00000461113 SFT2D2O95562 160 aa9.76□□□□□ -0.85
HDAC4-207ENST00000461113 IFNA17P01571 189 aa9.76□□□□□ -0.85
HDAC4-207ENST00000461113 PF4P02776 101 aa9.76□□□□□ -0.85
HDAC4-207ENST00000461113 RPLP1P05386 114 aaKnown RBP9.76□□□□□ -0.85
HDAC4-207ENST00000461113 IL6RP08887 468 aaPredicted RBP9.76□□□□□ -0.85
HDAC4-207ENST00000461113 HIST1H1BP16401 226 aaKnown RBP9.76□□□□□ -0.85
HDAC4-207ENST00000461113 CDX1P47902 265 aaPredicted RBP9.76□□□□□ -0.85
HDAC4-207ENST00000461113 OR2B8PP59922 312 aa9.76□□□□□ -0.85
HDAC4-207ENST00000461113 ASAH1Q13510 395 aa9.76□□□□□ -0.85
HDAC4-207ENST00000461113 TMEM187Q14656 261 aa9.76□□□□□ -0.85
HDAC4-207ENST00000461113 MRGPRG-AS1Q2M3A8 158 aa9.76□□□□□ -0.85
HDAC4-207ENST00000461113 C10orf55Q5SWW7 151 aa9.76□□□□□ -0.85
HDAC4-207ENST00000461113 CASC10Q5T4H9 136 aa9.76□□□□□ -0.85
HDAC4-207ENST00000461113 SELENOHQ8IZQ5 122 aaKnown RBP9.76□□□□□ -0.85
HDAC4-207ENST00000461113 TTC9CQ8N5M4 171 aa9.76□□□□□ -0.85
HDAC4-207ENST00000461113 KLHL30-AS1Q8NEE0 82 aa9.76□□□□□ -0.85
HDAC4-207ENST00000461113 CASTOR1Q8WTX7 329 aa9.76□□□□□ -0.85
HDAC4-207ENST00000461113 LSM10Q969L4 123 aaKnown RBP9.76□□□□□ -0.85
HDAC4-207ENST00000461113 TMEM230Q96A57 120 aa9.76□□□□□ -0.85
HDAC4-207ENST00000461113 UBE2E2Q96LR5 201 aa9.76□□□□□ -0.85
HDAC4-207ENST00000461113 MS4A10Q96PG2 267 aa9.76□□□□□ -0.85
HDAC4-207ENST00000461113 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.76□□□□□ -0.85
HDAC4-207ENST00000461113 THYN1Q9P016 225 aa9.76□□□□□ -0.85
HDAC4-207ENST00000461113 TMEM56-RWDD3S4R434 201 aa9.76□□□□□ -0.85
HDAC4-207ENST00000461113 HYDINQ4G0P3 5121 aa9.76□□□□□ -0.85
HDAC4-207ENST00000461113 A0A0B4J2A0 478 aa9.75□□□□□ -0.85
HDAC4-207ENST00000461113 LCE6AA0A183 80 aa9.75□□□□□ -0.85
HDAC4-207ENST00000461113 TEX50A0A1B0GTY4 177 aa9.75□□□□□ -0.85
HDAC4-207ENST00000461113 HMX3A6NHT5 357 aa9.75□□□□□ -0.85
HDAC4-207ENST00000461113 NPIPB5A8MRT5 1133 aa9.75□□□□□ -0.85
HDAC4-207ENST00000461113 ADARB2-AS1A8MUL3 147 aa9.75□□□□□ -0.85
HDAC4-207ENST00000461113 IGKV1-39P01597 117 aa9.75□□□□□ -0.85
HDAC4-207ENST00000461113 HLA-AP01891 365 aaKnown RBP9.75□□□□□ -0.85
HDAC4-207ENST00000461113 IGKV1D-39P04432 117 aa9.75□□□□□ -0.85
HDAC4-207ENST00000461113 TCRBP04435 133 aa9.75□□□□□ -0.85
HDAC4-207ENST00000461113 PSMB6P28072 239 aa9.75□□□□□ -0.85
HDAC4-207ENST00000461113 HSPE1P61604 102 aaKnown RBP9.75□□□□□ -0.85
HDAC4-207ENST00000461113 SSBP2P81877 361 aaPredicted RBP9.75□□□□□ -0.85
HDAC4-207ENST00000461113 ERHP84090 104 aaKnown RBP9.75□□□□□ -0.85
HDAC4-207ENST00000461113 C19orf54Q5BKX5 351 aa9.75□□□□□ -0.85
HDAC4-207ENST00000461113 TCTEX1D4Q5JR98 221 aa9.75□□□□□ -0.85
HDAC4-207ENST00000461113 SLC35G3Q8N808 338 aa9.75□□□□□ -0.85
HDAC4-207ENST00000461113 OR1L6Q8NGR2 347 aa9.75□□□□□ -0.85
HDAC4-207ENST00000461113 DPF1Q92782 380 aa9.75□□□□□ -0.85
HDAC4-207ENST00000461113 USMG5Q96IX5 58 aa9.75□□□□□ -0.85
HDAC4-207ENST00000461113 C20orf85Q9H1P6 137 aa9.75□□□□□ -0.85
HDAC4-207ENST00000461113 PLEKHA3Q9HB20 300 aa9.75□□□□□ -0.85
HDAC4-207ENST00000461113 TMEM14BQ9NUH8 114 aa9.75□□□□□ -0.85
HDAC4-207ENST00000461113 SHPKQ9UHJ6 478 aa9.75□□□□□ -0.85
HDAC4-207ENST00000461113 DNAH1Q9P2D7 4330 aa9.75□□□□□ -0.85
HDAC4-207ENST00000461113 FAM223BA6NKX1 122 aa9.74□□□□□ -0.85
HDAC4-207ENST00000461113 BRI3O95415 125 aa9.74□□□□□ -0.85
HDAC4-207ENST00000461113 IFNA21P01568 189 aa9.74□□□□□ -0.85
HDAC4-207ENST00000461113 IGKV1-5P01602 117 aa9.74□□□□□ -0.85
HDAC4-207ENST00000461113 H2AFB2P0C5Z0 115 aa9.74□□□□□ -0.85
HDAC4-207ENST00000461113 OR4E1P0C645 316 aa9.74□□□□□ -0.85
HDAC4-207ENST00000461113 NHLRC4P0CG21 123 aaPredicted RBP9.74□□□□□ -0.85
HDAC4-207ENST00000461113 SULT1A3P0DMM9 295 aa9.74□□□□□ -0.85
HDAC4-207ENST00000461113 SULT1A4P0DMN0 295 aa9.74□□□□□ -0.85
HDAC4-207ENST00000461113 OR13C7P0DN81 318 aa9.74□□□□□ -0.85
HDAC4-207ENST00000461113 ATP5G2Q06055 141 aa9.74□□□□□ -0.85
HDAC4-207ENST00000461113 PPP1R1AQ13522 171 aa9.74□□□□□ -0.85
HDAC4-207ENST00000461113 FAM209BQ5JX69 171 aa9.74□□□□□ -0.85
HDAC4-207ENST00000461113 LCNL1Q6ZST4 164 aa9.74□□□□□ -0.85
HDAC4-207ENST00000461113 ZNF429Q86V71 674 aa9.74□□□□□ -0.85
HDAC4-207ENST00000461113 FAM223AQ8IWN6 122 aa9.74□□□□□ -0.85
HDAC4-207ENST00000461113 ZNF491Q8N8L2 437 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 279.7 ms