RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 IGHV3-66A0A0C4DH42 116 aa13.7□□□□□ -0.22
SHANK1-204ENST00000391814 FTH1P19P0C7X4 201 aa13.7□□□□□ -0.22
SHANK1-204ENST00000391814 ZNF585BQ52M93 769 aa13.7□□□□□ -0.22
SHANK1-204ENST00000391814 DCAF10Q5QP82 559 aa13.7□□□□□ -0.22
SHANK1-204ENST00000391814 RNASEH2CQ8TDP1 164 aaKnown RBP13.7□□□□□ -0.22
SHANK1-204ENST00000391814 TM2D1Q9BX74 207 aa13.7□□□□□ -0.22
SHANK1-204ENST00000391814 SRXN1Q9BYN0 137 aa13.7□□□□□ -0.22
SHANK1-204ENST00000391814 PKIBQ9C010 78 aa13.7□□□□□ -0.22
SHANK1-204ENST00000391814 C11orf68Q9H3H3 251 aaKnown RBP13.7□□□□□ -0.22
SHANK1-204ENST00000391814 QSER1Q2KHR3 1735 aa13.7□□□□□ -0.22
SHANK1-204ENST00000391814 LILRA6Q6PI73 481 aa13.7□□□□□ -0.22
SHANK1-204ENST00000391814 GNB1LQ9BYB4 327 aa13.7□□□□□ -0.22
SHANK1-204ENST00000391814 MC5RP33032 325 aa13.69□□□□□ -0.22
SHANK1-204ENST00000391814 CA7P43166 264 aa13.69□□□□□ -0.22
SHANK1-204ENST00000391814 TEX45Q8NA69 505 aa13.69□□□□□ -0.22
SHANK1-204ENST00000391814 CCL8P80075 99 aa13.69□□□□□ -0.22
SHANK1-204ENST00000391814 UBE2V1Q13404 147 aa13.69□□□□□ -0.22
SHANK1-204ENST00000391814 ACTL10Q5JWF8 245 aa13.69□□□□□ -0.22
SHANK1-204ENST00000391814 ZNF664Q8N3J9 261 aa13.69□□□□□ -0.22
SHANK1-204ENST00000391814 ITLN1Q8WWA0 313 aa13.69□□□□□ -0.22
SHANK1-204ENST00000391814 JPT1Q9UK76 154 aa13.69□□□□□ -0.22
SHANK1-204ENST00000391814 GTF3AQ92664 365 aaKnown RBP13.69□□□□□ -0.22
SHANK1-204ENST00000391814 SFTPCP11686 197 aa13.69□□□□□ -0.22
SHANK1-204ENST00000391814 IL9P15248 144 aa13.69□□□□□ -0.22
SHANK1-204ENST00000391814 SEMA5BQ9P283 1151 aa13.69□□□□□ -0.22
SHANK1-204ENST00000391814 A0A087WV48 116 aa13.69□□□□□ -0.22
SHANK1-204ENST00000391814 CCL4P13236 92 aa13.69□□□□□ -0.22
SHANK1-204ENST00000391814 PAX2Q02962 417 aa13.69□□□□□ -0.22
SHANK1-204ENST00000391814 EGR4Q05215 589 aa13.69□□□□□ -0.22
SHANK1-204ENST00000391814 ANKRD36A6QL64 1941 aa13.69□□□□□ -0.22
SHANK1-204ENST00000391814 GATA2P23769 480 aaPredicted RBP13.68□□□□□ -0.22
SHANK1-204ENST00000391814 TMEM54Q969K7 222 aa13.68□□□□□ -0.22
SHANK1-204ENST00000391814 PILRAQ9UKJ1 303 aa13.68□□□□□ -0.22
SHANK1-204ENST00000391814 EIF4EBP2Q13542 120 aaPredicted RBP13.68□□□□□ -0.22
SHANK1-204ENST00000391814 TRAV5A0A0B4J249 113 aa13.68□□□□□ -0.22
SHANK1-204ENST00000391814 A0A0G2JLM5 398 aa13.68□□□□□ -0.22
SHANK1-204ENST00000391814 C17orf98A8MV24 154 aa13.68□□□□□ -0.22
SHANK1-204ENST00000391814 PMS2CLQ68D20 193 aa13.68□□□□□ -0.22
SHANK1-204ENST00000391814 ORMDL3Q8N138 153 aa13.68□□□□□ -0.22
SHANK1-204ENST00000391814 ZNF479Q96JC4 524 aa13.68□□□□□ -0.22
SHANK1-204ENST00000391814 M0R381 172 aa13.68□□□□□ -0.22
SHANK1-204ENST00000391814 PRTN3P24158 256 aa13.68□□□□□ -0.22
SHANK1-204ENST00000391814 HSD52Q0P140 79 aa13.68□□□□□ -0.22
SHANK1-204ENST00000391814 STRCQ7RTU9 1775 aa13.67□□□□□ -0.22
SHANK1-204ENST00000391814 GZMBP10144 247 aa13.67□□□□□ -0.22
SHANK1-204ENST00000391814 GP6Q9HCN6 339 aa13.67□□□□□ -0.22
SHANK1-204ENST00000391814 ZNF638Q14966 1978 aaKnown RBP13.67□□□□□ -0.22
SHANK1-204ENST00000391814 TRAV30A0A087WSZ9 112 aa13.67□□□□□ -0.22
SHANK1-204ENST00000391814 SEC11AP67812 179 aa13.67□□□□□ -0.22
SHANK1-204ENST00000391814 Q9H3A6 140 aa13.67□□□□□ -0.22
SHANK1-204ENST00000391814 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.67□□□□□ -0.22
SHANK1-204ENST00000391814 CD55P08174 381 aa13.67□□□□□ -0.22
SHANK1-204ENST00000391814 TRIP6Q15654 476 aaKnown RBP13.67□□□□□ -0.22
SHANK1-204ENST00000391814 OR10W1Q8NGF6 305 aa13.67□□□□□ -0.22
SHANK1-204ENST00000391814 COQ2Q96H96 371 aa13.67□□□□□ -0.22
SHANK1-204ENST00000391814 ST20Q9HBF5 79 aa13.67□□□□□ -0.22
SHANK1-204ENST00000391814 CYTL1Q9NRR1 136 aa13.67□□□□□ -0.22
SHANK1-204ENST00000391814 hDV102S1A0JD36 115 aa13.67□□□□□ -0.22
SHANK1-204ENST00000391814 WNT9BO14905 357 aa13.67□□□□□ -0.22
SHANK1-204ENST00000391814 NBEAP1P0C6P0 100 aa13.67□□□□□ -0.22
SHANK1-204ENST00000391814 DNASE2BQ8WZ79 361 aa13.67□□□□□ -0.22
SHANK1-204ENST00000391814 ZNF236Q9UL36 1845 aa13.67□□□□□ -0.22
SHANK1-204ENST00000391814 A0A087X0K7 114 aa13.66□□□□□ -0.22
SHANK1-204ENST00000391814 IGHV3-35A0A0C4DH35 117 aa13.66□□□□□ -0.22
SHANK1-204ENST00000391814 IGKCP01834 107 aa13.66□□□□□ -0.22
SHANK1-204ENST00000391814 OCC1Q8TAD7 63 aa13.66□□□□□ -0.22
SHANK1-204ENST00000391814 S4R3C0 116 aa13.66□□□□□ -0.22
SHANK1-204ENST00000391814 IGHV1-45A0A0A0MS14 117 aa13.66□□□□□ -0.22
SHANK1-204ENST00000391814 A8MWV9 139 aa13.66□□□□□ -0.22
SHANK1-204ENST00000391814 DMRTC2Q8IXT2 367 aaPredicted RBP13.66□□□□□ -0.22
SHANK1-204ENST00000391814 DEPPQ9NTK1 212 aa13.66□□□□□ -0.22
SHANK1-204ENST00000391814 hCG_38984A0A1B0GV85 526 aa13.66□□□□□ -0.22
SHANK1-204ENST00000391814 OR5P3Q8WZ94 311 aa13.66□□□□□ -0.22
SHANK1-204ENST00000391814 GDF15Q99988 308 aa13.66□□□□□ -0.22
SHANK1-204ENST00000391814 IFI27L2Q9H2X8 130 aa13.66□□□□□ -0.22
SHANK1-204ENST00000391814 C9JCJ5 164 aa13.66□□□□□ -0.22
SHANK1-204ENST00000391814 LHX8Q68G74 356 aa13.66□□□□□ -0.22
SHANK1-204ENST00000391814 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.66□□□□□ -0.22
SHANK1-204ENST00000391814 IGKV3D-20A0A0C4DH25 116 aa13.66□□□□□ -0.22
SHANK1-204ENST00000391814 DPM2O94777 84 aa13.66□□□□□ -0.22
SHANK1-204ENST00000391814 EVI2AP22794 236 aa13.66□□□□□ -0.22
SHANK1-204ENST00000391814 IGHV3OR16-13A0A075B7E8 117 aa13.65□□□□□ -0.22
SHANK1-204ENST00000391814 IGHV3-74A0A0B4J1X5 117 aa13.65□□□□□ -0.22
SHANK1-204ENST00000391814 LY6EQ16553 131 aa13.65□□□□□ -0.22
SHANK1-204ENST00000391814 CCDC144NLQ6NUI1 221 aa13.65□□□□□ -0.22
SHANK1-204ENST00000391814 CHCHD1Q96BP2 118 aaKnown RBP13.65□□□□□ -0.22
SHANK1-204ENST00000391814 FER1L6-AS1Q8NA97 138 aa13.65□□□□□ -0.22
SHANK1-204ENST00000391814 TRAV2A0A0B4J234 112 aa13.65□□□□□ -0.22
SHANK1-204ENST00000391814 A0A1W2PS18 150 aa13.65□□□□□ -0.22
SHANK1-204ENST00000391814 CTSBP07858 339 aa13.65□□□□□ -0.22
SHANK1-204ENST00000391814 DIRC2Q96SL1 478 aa13.65□□□□□ -0.22
SHANK1-204ENST00000391814 DUX5Q96PT3 197 aa13.65□□□□□ -0.22
SHANK1-204ENST00000391814 CITED1Q99966 193 aa13.65□□□□□ -0.22
SHANK1-204ENST00000391814 IGFBP3P17936 291 aaPredicted RBP13.64□□□□□ -0.23
SHANK1-204ENST00000391814 TMEM256Q8N2U0 113 aa13.64□□□□□ -0.23
SHANK1-204ENST00000391814 AHDC1Q5TGY3 1603 aaPredicted RBP13.64□□□□□ -0.23
SHANK1-204ENST00000391814 IGKV1D-43A0A0B4J1Z2 117 aa13.64□□□□□ -0.23
SHANK1-204ENST00000391814 ERVK11-1P61568 191 aa13.64□□□□□ -0.23
SHANK1-204ENST00000391814 C1orf122Q6ZSJ8 110 aa13.64□□□□□ -0.23
SHANK1-204ENST00000391814 GFI1Q99684 422 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms