RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Tex15F8VPN2 2785 aa7.02□□□□□ -1.29
Trim39-205ENSMUST00000173369 Gm21854A0A087WNM4 232 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr1124A2AT86 318 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Vmn1r7E9Q8T0 311 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr64F8VPZ8 307 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Ccl20O89093 97 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Amy2P00688 508 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Cdx1P18111 268 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Stfa2P35174 103 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Htr2aP35363 471 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Otx1P80205 355 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Serpine2Q07235 397 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Samd5Q3V1H9 173 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Tnfsf15Q5UBV8 252 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Igsf21Q7TNR6 468 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Fbxl14Q8BID8 400 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Ap3s2Q8BSZ2 193 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Fam234bQ8BYI8 624 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Lrrtm1Q8K377 522 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Vmn1r192Q8K4C9 300 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Lsm10Q8QZX5 122 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Pcgf1Q8R023 259 aaKnown RBP7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Thyn1Q91YJ3 226 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Tmem218Q9CQ44 115 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Rtl8bQ9D1F0 113 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Naa10Q9QY36 235 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Ank2Q8C8R3 3898 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Igkv1-135A0A0B4J1H7 120 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Siglec15A7E1W8 342 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Cdkn1bP46414 197 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Sf3b6P59708 125 aaKnown RBP7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 CluQ06890 448 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Nufip2Q5F2E7 692 aaKnown RBP7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr598Q7TRR2 319 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr304Q7TS03 333 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr995Q8VF74 315 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr523Q8VFE7 317 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr678Q8VG26 313 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Nudt16l1Q8VHN8 211 aaKnown RBP7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr713Q920G5 324 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Mob1aQ921Y0 216 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Mrpl13Q9D1P0 178 aaKnown RBP7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Ube2v2Q9D2M8 145 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Sema7aQ9QUR8 664 aa7.01□□□□□ -1.29
Trim39-205ENSMUST00000173369 Gm45808A0A1B0GSH8 263 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr1104A2AVB5 310 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Vmn1r9A2RST7 299 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr329-psM9MMK4 331 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Rdh16O54909 317 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Dnase2P56542 353 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Gm11110Q3U4K9 109 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Zfp941Q3URY5 674 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Bod1Q5SQY2 173 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Ppp3r1Q63810 170 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Tmem242Q8VCR3 140 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr1151Q8VFQ8 308 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr1294Q8VGE5 312 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Atp6v0bQ91V37 205 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr116Q923Q6 321 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Thumpd1Q99J36 350 aaKnown RBP7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Tmbim7Q9D592 302 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Xcr1Q9R0M1 322 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 StrapQ9Z1Z2 350 aaKnown RBP7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Gm5890A0A140LI04 305 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Gm8126E9Q1N7 198 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr117L7N1Z1 317 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr203L7N205 307 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Sp100O35892 482 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 P01800 113 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 PkiaP63248 76 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 St6galnac2P70277 373 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Hist1h2baP70696 127 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 NotoQ5TIS6 240 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Inca1Q6PKN7 231 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Hide1Q75VT8 222 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr1106Q7TR57 312 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Slc25a44Q8BGF9 314 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Vmn1r237Q8R296 289 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr130Q8VFC1 317 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr490Q8VFD2 314 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr181Q8VGQ7 317 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Olfr1413Q8VGU3 323 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Vgll1Q99NC0 307 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Rnf2Q9CQJ4 336 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 4931428L18RikQ9D4S9 127 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Wbp2nlQ9D529 359 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Avpi1Q9D7H4 142 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Irak1bp1Q9ESJ7 259 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Nudt3Q9JI46 168 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Gdf15Q9Z0J7 303 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Ighv6-6A0A075B5T3 119 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Gm14444A2ARW3 426 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Prss56F2YMG0 604 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Gm15130F6PYN5 206 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Gm8220F6YKI2 213 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Slc38a6G3UVW3 457 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Vmn1r57K7N731 310 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Gm7970L7N271 213 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Gm7980L7N471 213 aa7□□□□□ -1.29
Trim39-205ENSMUST00000173369 Mrpl23O35972 146 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 22,080 RNA–protein pairs in 93.5 ms