Protein–RNA interactions for Protein: Q8QZX5

Lsm10, U7 snRNA-associated Sm-like protein LSm10, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm10Q8QZX5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Lsm10Q8QZX5 Gm25239-201ENSMUST00000174915 86 ntBASIC30.27■■■□□ 2.44
Lsm10Q8QZX5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.63■■■□□ 2.33
Lsm10Q8QZX5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Lsm10Q8QZX5 Psd-208ENSMUST00000224556 2034 ntBASIC28.76■■■□□ 2.19
Lsm10Q8QZX5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Lsm10Q8QZX5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Lsm10Q8QZX5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.91■■■□□ 2.06
Lsm10Q8QZX5 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Lsm10Q8QZX5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Lsm10Q8QZX5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC27.55■■■□□ 2
Lsm10Q8QZX5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Lsm10Q8QZX5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Lsm10Q8QZX5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Lsm10Q8QZX5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Lsm10Q8QZX5 Gm15042-201ENSMUST00000120212 883 ntBASIC27.32■■□□□ 1.96
Lsm10Q8QZX5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.27■■□□□ 1.96
Lsm10Q8QZX5 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Lsm10Q8QZX5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
Lsm10Q8QZX5 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Lsm10Q8QZX5 Gm15045-201ENSMUST00000117359 883 ntBASIC26.88■■□□□ 1.89
Lsm10Q8QZX5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Lsm10Q8QZX5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Lsm10Q8QZX5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Lsm10Q8QZX5 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
Lsm10Q8QZX5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Lsm10Q8QZX5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Lsm10Q8QZX5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.45■■□□□ 1.82
Lsm10Q8QZX5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Lsm10Q8QZX5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Lsm10Q8QZX5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.34■■□□□ 1.81
Lsm10Q8QZX5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
Lsm10Q8QZX5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Lsm10Q8QZX5 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.27■■□□□ 1.8
Lsm10Q8QZX5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Lsm10Q8QZX5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Lsm10Q8QZX5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Lsm10Q8QZX5 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.03■■□□□ 1.76
Lsm10Q8QZX5 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Lsm10Q8QZX5 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Lsm10Q8QZX5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.89■■□□□ 1.73
Lsm10Q8QZX5 Gm24109-201ENSMUST00000175489 103 ntBASIC25.85■■□□□ 1.73
Lsm10Q8QZX5 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.75■■□□□ 1.71
Lsm10Q8QZX5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Lsm10Q8QZX5 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Lsm10Q8QZX5 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.65■■□□□ 1.7
Lsm10Q8QZX5 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Lsm10Q8QZX5 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Lsm10Q8QZX5 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Lsm10Q8QZX5 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Lsm10Q8QZX5 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
Lsm10Q8QZX5 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Lsm10Q8QZX5 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Lsm10Q8QZX5 Gm23366-201ENSMUST00000175022 89 ntBASIC25.42■■□□□ 1.66
Lsm10Q8QZX5 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Lsm10Q8QZX5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Lsm10Q8QZX5 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Lsm10Q8QZX5 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Lsm10Q8QZX5 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Lsm10Q8QZX5 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Lsm10Q8QZX5 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.25■■□□□ 1.63
Lsm10Q8QZX5 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Lsm10Q8QZX5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Lsm10Q8QZX5 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Lsm10Q8QZX5 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
Lsm10Q8QZX5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Lsm10Q8QZX5 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.08■■□□□ 1.61
Lsm10Q8QZX5 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Lsm10Q8QZX5 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Lsm10Q8QZX5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Lsm10Q8QZX5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Lsm10Q8QZX5 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Lsm10Q8QZX5 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Lsm10Q8QZX5 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Lsm10Q8QZX5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.85■■□□□ 1.57
Lsm10Q8QZX5 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Lsm10Q8QZX5 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
Lsm10Q8QZX5 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Lsm10Q8QZX5 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
Lsm10Q8QZX5 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.72■■□□□ 1.55
Lsm10Q8QZX5 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Lsm10Q8QZX5 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Lsm10Q8QZX5 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Lsm10Q8QZX5 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Lsm10Q8QZX5 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Lsm10Q8QZX5 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Lsm10Q8QZX5 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Lsm10Q8QZX5 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Lsm10Q8QZX5 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Lsm10Q8QZX5 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Lsm10Q8QZX5 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC24.38■■□□□ 1.49
Lsm10Q8QZX5 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.36■■□□□ 1.49
Lsm10Q8QZX5 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Lsm10Q8QZX5 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Lsm10Q8QZX5 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Lsm10Q8QZX5 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Lsm10Q8QZX5 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Lsm10Q8QZX5 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Lsm10Q8QZX5 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Lsm10Q8QZX5 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms