Protein–RNA interactions for Protein: Q8R023

Pcgf1, Polycomb group RING finger protein 1, mousemouse

Known RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcgf1Q8R023 Gm25239-201ENSMUST00000174915 86 ntBASIC31.02■■■□□ 2.56
Pcgf1Q8R023 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Pcgf1Q8R023 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Pcgf1Q8R023 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Pcgf1Q8R023 Gm15042-201ENSMUST00000120212 883 ntBASIC27.23■■□□□ 1.95
Pcgf1Q8R023 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Pcgf1Q8R023 Gm24109-201ENSMUST00000175489 103 ntBASIC26.82■■□□□ 1.88
Pcgf1Q8R023 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
Pcgf1Q8R023 Gm15045-201ENSMUST00000117359 883 ntBASIC26.58■■□□□ 1.85
Pcgf1Q8R023 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Pcgf1Q8R023 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Pcgf1Q8R023 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Pcgf1Q8R023 Gm23366-201ENSMUST00000175022 89 ntBASIC25.95■■□□□ 1.74
Pcgf1Q8R023 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Pcgf1Q8R023 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Pcgf1Q8R023 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Pcgf1Q8R023 Psd-208ENSMUST00000224556 2034 ntBASIC25.62■■□□□ 1.69
Pcgf1Q8R023 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.37■■□□□ 1.65
Pcgf1Q8R023 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Pcgf1Q8R023 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Pcgf1Q8R023 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pcgf1Q8R023 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Pcgf1Q8R023 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Pcgf1Q8R023 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Pcgf1Q8R023 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
Pcgf1Q8R023 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.01■■□□□ 1.59
Pcgf1Q8R023 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
Pcgf1Q8R023 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Pcgf1Q8R023 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcgf1Q8R023 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24.85■■□□□ 1.57
Pcgf1Q8R023 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Pcgf1Q8R023 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24.76■■□□□ 1.55
Pcgf1Q8R023 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pcgf1Q8R023 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24.74■■□□□ 1.55
Pcgf1Q8R023 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Pcgf1Q8R023 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pcgf1Q8R023 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Pcgf1Q8R023 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcgf1Q8R023 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcgf1Q8R023 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.46■■□□□ 1.51
Pcgf1Q8R023 Gm25238-201ENSMUST00000174914 89 ntBASIC24.43■■□□□ 1.5
Pcgf1Q8R023 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.4■■□□□ 1.5
Pcgf1Q8R023 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcgf1Q8R023 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pcgf1Q8R023 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pcgf1Q8R023 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pcgf1Q8R023 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcgf1Q8R023 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23.97■■□□□ 1.43
Pcgf1Q8R023 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
Pcgf1Q8R023 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23.94■■□□□ 1.42
Pcgf1Q8R023 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcgf1Q8R023 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Pcgf1Q8R023 Gm27325-201ENSMUST00000175467 74 ntBASIC23.84■■□□□ 1.41
Pcgf1Q8R023 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcgf1Q8R023 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcgf1Q8R023 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Pcgf1Q8R023 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcgf1Q8R023 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23.75■■□□□ 1.39
Pcgf1Q8R023 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23.69■■□□□ 1.38
Pcgf1Q8R023 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.68■■□□□ 1.38
Pcgf1Q8R023 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcgf1Q8R023 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.66■■□□□ 1.38
Pcgf1Q8R023 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.62■■□□□ 1.37
Pcgf1Q8R023 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
Pcgf1Q8R023 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Pcgf1Q8R023 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
Pcgf1Q8R023 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcgf1Q8R023 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcgf1Q8R023 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Pcgf1Q8R023 Gm25262-201ENSMUST00000174934 133 ntBASIC23.41■■□□□ 1.34
Pcgf1Q8R023 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.41■■□□□ 1.34
Pcgf1Q8R023 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcgf1Q8R023 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Pcgf1Q8R023 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pcgf1Q8R023 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pcgf1Q8R023 Rab21-202ENSMUST00000218831 843 ntBASIC23.37■■□□□ 1.33
Pcgf1Q8R023 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Pcgf1Q8R023 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
Pcgf1Q8R023 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23.3■■□□□ 1.32
Pcgf1Q8R023 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcgf1Q8R023 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcgf1Q8R023 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcgf1Q8R023 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.19■■□□□ 1.3
Pcgf1Q8R023 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Pcgf1Q8R023 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.16■■□□□ 1.3
Pcgf1Q8R023 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcgf1Q8R023 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Pcgf1Q8R023 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcgf1Q8R023 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Pcgf1Q8R023 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcgf1Q8R023 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.03■■□□□ 1.28
Pcgf1Q8R023 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Pcgf1Q8R023 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcgf1Q8R023 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23■■□□□ 1.27
Pcgf1Q8R023 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcgf1Q8R023 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcgf1Q8R023 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC22.96■■□□□ 1.27
Pcgf1Q8R023 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC22.95■■□□□ 1.26
Pcgf1Q8R023 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcgf1Q8R023 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.89■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms