RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 Q8N2B8 174 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 LFNGQ8NES3 379 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 OR5L1Q8NGL2 311 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 PYDC1Q8WXC3 89 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 DCUN1D5Q9BTE7 237 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 SPANXB1Q9NS25 103 aaPredicted RBP0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 SPANXCQ9NY87 97 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 NAT8Q9UHE5 227 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 KIF24Q5T7B8 1368 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 TONSLQ96HA7 1378 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 WDR7Q9Y4E6 1490 aa0.66□□□□□ -2.3
SUPT16H-206ENST00000556309 RAD50Q92878 1312 aa0.65□□□□□ -2.3
SUPT16H-206ENST00000556309 MED12LQ86YW9 2145 aa0.65□□□□□ -2.3
SUPT16H-206ENST00000556309 NCOA6Q14686 2063 aaPredicted RBP0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 IGKV2D-26A0A0A0MRZ7 120 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 EFCAB10A6NFE3 127 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 TRPC5OSA6NMA1 111 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 F8W036 122 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 SLC16A4O15374 487 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 BIRC5O15392 142 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 TOX3O15405 576 aaPredicted RBP0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 CALUO43852 315 aaPredicted RBP0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 STX10O60499 249 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 ORM1P02763 201 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 HMGN1P05114 100 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 IL6P05231 212 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 PET100P0DJ07 73 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 S100A1P23297 94 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 PSMB8P28062 276 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 CD40LGP29965 261 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 AP2S1P53680 142 aaPredicted RBP0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 AP1S1P61966 158 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 SKP1P63208 163 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 MED21Q13503 144 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 KRR1Q13601 381 aaKnown RBP0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 NDUFA5Q16718 116 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 CCDC153Q494R4 210 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 CCDC58Q4VC31 144 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 LPCAT4Q643R3 524 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 AKAP14Q86UN6 197 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 RPS19BP1Q86WX3 136 aaKnown RBP0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 CD302Q8IX05 232 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 TEX47Q8TBZ9 253 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 CCDC42Q96M95 316 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 ODF3Q96PU9 254 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 TSC22D3Q99576 134 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 BBS2Q9BXC9 721 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 MRPS26Q9BYN8 205 aaKnown RBP0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 UPF3BQ9BZI7 483 aaKnown RBP0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 CCDC90BQ9GZT6 254 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 MS4A6AQ9H2W1 248 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 UCK1Q9HA47 277 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 SPACA1Q9HBV2 294 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 BATF3Q9NR55 127 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 TP53TG1Q9Y2A0 90 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 C22orf24Q9Y442 160 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 CACNA1BQ00975 2339 aa0.65□□□□□ -2.31
SUPT16H-206ENST00000556309 CCDC171Q6TFL3 1326 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 PTPRGP23470 1445 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 A0A1B0GV50 99 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 TMEM213A2RRL7 107 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 C5orf49A4QMS7 147 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 GOLGA8KD6RF30 607 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 FTCDNL1E5RQL4 147 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 LRRN3E7EW58 273 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 GOLGA8MH3BSY2 632 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 COX7A2LO14548 114 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 SSNA1O43805 119 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 OR5F1O95221 314 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 DEXIO95424 95 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 SERPINA1P01009 418 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 IFNA14P01570 189 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 HLA-DRAP01903 254 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 TRGC1P0CF51 173 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 UCHL3P15374 230 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 HAAOP46952 286 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 OMPP47874 163 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 EMP1P54849 157 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 ARF6P62330 175 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 SMCO1Q147U7 214 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 POU6F1Q14863 301 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 SPCS2Q15005 226 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 ELOBQ15370 118 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 COQ5Q5HYK3 327 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 C3orf33Q6P1S2 294 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 FAM151BQ6UXP7 276 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 TMED4Q7Z7H5 227 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 UBL4BQ8N7F7 174 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 C9orf163Q8N9P6 203 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 OR7G1Q8NGA0 311 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 FAM172AQ8WUF8 416 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 ANKRD7Q92527 254 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 ZHX1-C8orf76Q96EF9 292 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 ANKRD36BP1Q96IX9 119 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 BTF3L4Q96K17 158 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 CNBD2Q96M20 576 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 CGREF1Q99674 301 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 AIF1LQ9BQI0 150 aa0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 C7orf50Q9BRJ6 194 aaKnown RBP0.64□□□□□ -2.31
SUPT16H-206ENST00000556309 TMEM70Q9BUB7 260 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms