RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 LINC00614P0C842 121 aa11.37□□□□□ -0.59
HDAC7-228ENST00000548938 AARDQ4LEZ3 155 aa11.37□□□□□ -0.59
HDAC7-228ENST00000548938 OR8I2Q8N0Y5 310 aa11.37□□□□□ -0.59
HDAC7-228ENST00000548938 Q8N976 141 aa11.37□□□□□ -0.59
HDAC7-228ENST00000548938 ST6GALNAC3Q8NDV1 305 aa11.37□□□□□ -0.59
HDAC7-228ENST00000548938 NANOS1Q8WY41 292 aaKnown RBP11.37□□□□□ -0.59
HDAC7-228ENST00000548938 C1orf159Q96HA4 380 aa11.37□□□□□ -0.59
HDAC7-228ENST00000548938 PRRC2CQ9Y520 2896 aaKnown RBP11.37□□□□□ -0.59
HDAC7-228ENST00000548938 SPINK4O60575 86 aa11.37□□□□□ -0.59
HDAC7-228ENST00000548938 FOXH1O75593 365 aa11.37□□□□□ -0.59
HDAC7-228ENST00000548938 Q0VG73 95 aa11.37□□□□□ -0.59
HDAC7-228ENST00000548938 ABHD12Q8N2K0 398 aa11.37□□□□□ -0.59
HDAC7-228ENST00000548938 GMPPAQ96IJ6 420 aaPredicted RBP11.37□□□□□ -0.59
HDAC7-228ENST00000548938 EAF1Q96JC9 268 aaPredicted RBP11.37□□□□□ -0.59
HDAC7-228ENST00000548938 PROP1O75360 226 aa11.37□□□□□ -0.59
HDAC7-228ENST00000548938 CRYABP02511 175 aaKnown RBP11.37□□□□□ -0.59
HDAC7-228ENST00000548938 VDAC2P45880 294 aaPredicted RBP11.37□□□□□ -0.59
HDAC7-228ENST00000548938 RPEL1Q2QD12 228 aa11.37□□□□□ -0.59
HDAC7-228ENST00000548938 SIGLECL1Q8N7X8 197 aa11.37□□□□□ -0.59
HDAC7-228ENST00000548938 WDR31Q8NA23 367 aa11.37□□□□□ -0.59
HDAC7-228ENST00000548938 PPIAL4AQ9Y536 164 aa11.37□□□□□ -0.59
HDAC7-228ENST00000548938 PTPRBP23467 1997 aa11.36□□□□□ -0.59
HDAC7-228ENST00000548938 TRAV3A0A0B4J244 114 aa11.36□□□□□ -0.59
HDAC7-228ENST00000548938 GFRA3O60609 400 aa11.36□□□□□ -0.59
HDAC7-228ENST00000548938 COTL1Q14019 142 aa11.36□□□□□ -0.59
HDAC7-228ENST00000548938 EFNB3Q15768 340 aa11.36□□□□□ -0.59
HDAC7-228ENST00000548938 DMRTA1Q5VZB9 504 aa11.36□□□□□ -0.59
HDAC7-228ENST00000548938 OR4A16Q8NH70 328 aa11.36□□□□□ -0.59
HDAC7-228ENST00000548938 OBP2BQ9NPH6 170 aa11.36□□□□□ -0.59
HDAC7-228ENST00000548938 V9GYV3 84 aa11.36□□□□□ -0.59
HDAC7-228ENST00000548938 HCFC1P51610 2035 aa11.36□□□□□ -0.59
HDAC7-228ENST00000548938 URB1O60287 2271 aaKnown RBP11.36□□□□□ -0.59
HDAC7-228ENST00000548938 DIRC3C9JPN6 131 aa11.36□□□□□ -0.59
HDAC7-228ENST00000548938 GPX1P07203 203 aa11.36□□□□□ -0.59
HDAC7-228ENST00000548938 DUTP33316 252 aaKnown RBP11.36□□□□□ -0.59
HDAC7-228ENST00000548938 MPV17P39210 176 aa11.36□□□□□ -0.59
HDAC7-228ENST00000548938 PLGLB1Q02325 96 aa11.36□□□□□ -0.59
HDAC7-228ENST00000548938 KIAA1644Q3SXP7 199 aa11.36□□□□□ -0.59
HDAC7-228ENST00000548938 HES3Q5TGS1 186 aa11.36□□□□□ -0.59
HDAC7-228ENST00000548938 FBXW9Q5XUX1 488 aa11.36□□□□□ -0.59
HDAC7-228ENST00000548938 C11orf52Q96A22 123 aa11.36□□□□□ -0.59
HDAC7-228ENST00000548938 ZNF586Q9NXT0 402 aa11.36□□□□□ -0.59
HDAC7-228ENST00000548938 TBL2Q9Y4P3 447 aaKnown RBP11.36□□□□□ -0.59
HDAC7-228ENST00000548938 A8MXE2 369 aa11.35□□□□□ -0.59
HDAC7-228ENST00000548938 C9JCJ5 164 aa11.35□□□□□ -0.59
HDAC7-228ENST00000548938 TMEM164Q5U3C3 297 aa11.35□□□□□ -0.59
HDAC7-228ENST00000548938 ABHD17BQ5VST6 288 aa11.35□□□□□ -0.59
HDAC7-228ENST00000548938 C11orf53Q8IXP5 236 aa11.35□□□□□ -0.59
HDAC7-228ENST00000548938 STPG3Q8N7X2 389 aa11.35□□□□□ -0.59
HDAC7-228ENST00000548938 OR4B1Q8NGF8 309 aa11.35□□□□□ -0.59
HDAC7-228ENST00000548938 RCHY1Q96PM5 261 aa11.35□□□□□ -0.59
HDAC7-228ENST00000548938 LSM4Q9Y4Z0 139 aaKnown RBP11.35□□□□□ -0.59
HDAC7-228ENST00000548938 IQCF6A8MYZ5 107 aa11.35□□□□□ -0.59
HDAC7-228ENST00000548938 GPR12P47775 334 aa11.35□□□□□ -0.59
HDAC7-228ENST00000548938 RAB7AP51149 207 aa11.35□□□□□ -0.59
HDAC7-228ENST00000548938 RPP30P78346 268 aaKnown RBP11.35□□□□□ -0.59
HDAC7-228ENST00000548938 SLC35B1P78383 322 aa11.35□□□□□ -0.59
HDAC7-228ENST00000548938 GABRA6Q16445 453 aa11.35□□□□□ -0.59
HDAC7-228ENST00000548938 COL5A1-AS1Q5SY13 56 aa11.35□□□□□ -0.59
HDAC7-228ENST00000548938 ACP7Q6ZNF0 438 aa11.35□□□□□ -0.59
HDAC7-228ENST00000548938 LINC00696Q6ZRV3 163 aa11.35□□□□□ -0.59
HDAC7-228ENST00000548938 SFXN3Q9BWM7 321 aa11.35□□□□□ -0.59
HDAC7-228ENST00000548938 NAT8BQ9UHF3 227 aa11.35□□□□□ -0.59
HDAC7-228ENST00000548938 TET2Q6N021 2002 aaPredicted RBP11.34□□□□□ -0.59
HDAC7-228ENST00000548938 TRGV10A0A0A0MS01 117 aa11.34□□□□□ -0.59
HDAC7-228ENST00000548938 CGAP01215 116 aa11.34□□□□□ -0.59
HDAC7-228ENST00000548938 PMCHP20382 165 aa11.34□□□□□ -0.59
HDAC7-228ENST00000548938 CTRLP40313 264 aa11.34□□□□□ -0.59
HDAC7-228ENST00000548938 AMTP48728 403 aa11.34□□□□□ -0.59
HDAC7-228ENST00000548938 TMPRSS3P57727 454 aa11.34□□□□□ -0.59
HDAC7-228ENST00000548938 HTD2P86397 168 aa11.34□□□□□ -0.59
HDAC7-228ENST00000548938 MMDQ15546 238 aa11.34□□□□□ -0.59
HDAC7-228ENST00000548938 OR4P4Q8NGL7 312 aa11.34□□□□□ -0.59
HDAC7-228ENST00000548938 RNF2Q99496 336 aa11.34□□□□□ -0.59
HDAC7-228ENST00000548938 IGHV3-13P01766 116 aa11.34□□□□□ -0.59
HDAC7-228ENST00000548938 IGHV3-7P01780 117 aa11.34□□□□□ -0.59
HDAC7-228ENST00000548938 RHOBP62745 196 aa11.34□□□□□ -0.59
HDAC7-228ENST00000548938 EDDM3AQ14507 147 aa11.34□□□□□ -0.59
HDAC7-228ENST00000548938 SPATA45Q537H7 98 aa11.34□□□□□ -0.59
HDAC7-228ENST00000548938 CENPWQ5EE01 88 aa11.34□□□□□ -0.59
HDAC7-228ENST00000548938 DOLPP1Q86YN1 238 aa11.34□□□□□ -0.59
HDAC7-228ENST00000548938 C1orf174Q8IYL3 243 aa11.34□□□□□ -0.59
HDAC7-228ENST00000548938 C11orf42Q8N5U0 333 aa11.34□□□□□ -0.59
HDAC7-228ENST00000548938 UHRF2Q96PU4 802 aa11.34□□□□□ -0.59
HDAC7-228ENST00000548938 GNB1LQ9BYB4 327 aa11.34□□□□□ -0.59
HDAC7-228ENST00000548938 NRN1Q9NPD7 142 aa11.34□□□□□ -0.59
HDAC7-228ENST00000548938 M0R1X1 148 aa11.33□□□□□ -0.6
HDAC7-228ENST00000548938 CHRNB4P30926 498 aa11.33□□□□□ -0.6
HDAC7-228ENST00000548938 TCL1AP56279 114 aa11.33□□□□□ -0.6
HDAC7-228ENST00000548938 MRPL49Q13405 166 aaKnown RBP11.33□□□□□ -0.6
HDAC7-228ENST00000548938 FXYD3Q14802 87 aa11.33□□□□□ -0.6
HDAC7-228ENST00000548938 RPL39P5Q59GN2 51 aa11.33□□□□□ -0.6
HDAC7-228ENST00000548938 RNASE7Q9H1E1 156 aaKnown RBP11.33□□□□□ -0.6
HDAC7-228ENST00000548938 OPN3Q9H1Y3 402 aaPredicted RBP11.33□□□□□ -0.6
HDAC7-228ENST00000548938 TRBV9A0A0B4J1U6 114 aa11.33□□□□□ -0.6
HDAC7-228ENST00000548938 C15orf65H3BRN8 121 aa11.33□□□□□ -0.6
HDAC7-228ENST00000548938 J3QW42 95 aa11.33□□□□□ -0.6
HDAC7-228ENST00000548938 SIAH2O43255 324 aa11.33□□□□□ -0.6
HDAC7-228ENST00000548938 SP1P08047 785 aa11.33□□□□□ -0.6
HDAC7-228ENST00000548938 RELBQ01201 579 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms