RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 C3orf79P0CE67 100 aa13.53□□□□□ -0.24
LSP1-204ENST00000406638 TSPOP30536 169 aa13.53□□□□□ -0.24
LSP1-204ENST00000406638 FBLN7Q53RD9 439 aa13.53□□□□□ -0.24
LSP1-204ENST00000406638 ST6GALNAC3Q8NDV1 305 aa13.53□□□□□ -0.24
LSP1-204ENST00000406638 LIN7CQ9NUP9 197 aaKnown RBP13.53□□□□□ -0.24
LSP1-204ENST00000406638 RP1L1Q8IWN7 2480 aaPredicted RBP13.53□□□□□ -0.24
LSP1-204ENST00000406638 A0A1W2PS18 150 aa13.52□□□□□ -0.24
LSP1-204ENST00000406638 DPRXA6NFQ7 191 aa13.52□□□□□ -0.24
LSP1-204ENST00000406638 ZNF891A8MT65 544 aaPredicted RBP13.52□□□□□ -0.24
LSP1-204ENST00000406638 LCN12Q6JVE5 192 aa13.52□□□□□ -0.24
LSP1-204ENST00000406638 ZNF391Q9UJN7 358 aa13.52□□□□□ -0.24
LSP1-204ENST00000406638 PRR14LQ5THK1 2151 aa13.52□□□□□ -0.24
LSP1-204ENST00000406638 TRAV24A0A0B4J272 114 aa13.52□□□□□ -0.25
LSP1-204ENST00000406638 IGHV2OR16-5A0A0B4J2B6 119 aa13.52□□□□□ -0.25
LSP1-204ENST00000406638 ZNF83P51522 516 aa13.52□□□□□ -0.25
LSP1-204ENST00000406638 LGALS4P56470 323 aa13.52□□□□□ -0.25
LSP1-204ENST00000406638 ARF1P84077 181 aaKnown RBP13.52□□□□□ -0.25
LSP1-204ENST00000406638 ZNF816Q0VGE8 651 aaPredicted RBP13.52□□□□□ -0.25
LSP1-204ENST00000406638 OR8I2Q8N0Y5 310 aa13.52□□□□□ -0.25
LSP1-204ENST00000406638 BET1LQ9NYM9 111 aa13.52□□□□□ -0.25
LSP1-204ENST00000406638 HSPB7Q9UBY9 170 aa13.52□□□□□ -0.25
LSP1-204ENST00000406638 NAT8BQ9UHF3 227 aa13.52□□□□□ -0.25
LSP1-204ENST00000406638 DEGS1O15121 323 aa13.51□□□□□ -0.25
LSP1-204ENST00000406638 RBMXL2O75526 392 aaKnown RBP13.51□□□□□ -0.25
LSP1-204ENST00000406638 ARL14EPLP0DKL9 152 aa13.51□□□□□ -0.25
LSP1-204ENST00000406638 DRAM1Q8N682 238 aa13.51□□□□□ -0.25
LSP1-204ENST00000406638 UHRF2Q96PU4 802 aa13.51□□□□□ -0.25
LSP1-204ENST00000406638 IGKV3D-15A0A087WSY6 115 aa13.51□□□□□ -0.25
LSP1-204ENST00000406638 NTF3P20783 257 aa13.51□□□□□ -0.25
LSP1-204ENST00000406638 HTD2P86397 168 aa13.51□□□□□ -0.25
LSP1-204ENST00000406638 IGFL2Q6UWQ7 119 aa13.51□□□□□ -0.25
LSP1-204ENST00000406638 MED12LQ86YW9 2145 aa13.51□□□□□ -0.25
LSP1-204ENST00000406638 VPS25Q9BRG1 176 aa13.51□□□□□ -0.25
LSP1-204ENST00000406638 FAM90A26D6RGX4 464 aa13.5□□□□□ -0.25
LSP1-204ENST00000406638 C17orf112F2Z3M2 114 aa13.5□□□□□ -0.25
LSP1-204ENST00000406638 GFRA3O60609 400 aa13.5□□□□□ -0.25
LSP1-204ENST00000406638 IGFBP7Q16270 282 aa13.5□□□□□ -0.25
LSP1-204ENST00000406638 KRTAP27-1Q3LI81 207 aa13.5□□□□□ -0.25
LSP1-204ENST00000406638 MMD2Q8IY49 270 aa13.5□□□□□ -0.25
LSP1-204ENST00000406638 CPT1CQ8TCG5 803 aa13.5□□□□□ -0.25
LSP1-204ENST00000406638 IGHV2-70DA0A0C4DH43 119 aa13.5□□□□□ -0.25
LSP1-204ENST00000406638 ODAMA1E959 279 aa13.5□□□□□ -0.25
LSP1-204ENST00000406638 CACNA1DQ01668 2161 aa13.5□□□□□ -0.25
LSP1-204ENST00000406638 LRRC30A6NM36 301 aa13.49□□□□□ -0.25
LSP1-204ENST00000406638 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.49□□□□□ -0.25
LSP1-204ENST00000406638 GTF3C1Q12789 2109 aa13.49□□□□□ -0.25
LSP1-204ENST00000406638 VAMP3Q15836 100 aa13.49□□□□□ -0.25
LSP1-204ENST00000406638 TCTEX1D1Q8N7M0 179 aa13.49□□□□□ -0.25
LSP1-204ENST00000406638 Q8N7P7 452 aa13.49□□□□□ -0.25
LSP1-204ENST00000406638 SLC35D1Q9NTN3 355 aa13.49□□□□□ -0.25
LSP1-204ENST00000406638 PRRX1P54821 245 aa13.49□□□□□ -0.25
LSP1-204ENST00000406638 RPL31P62899 125 aaKnown RBP13.49□□□□□ -0.25
LSP1-204ENST00000406638 RPEL1Q2QD12 228 aa13.49□□□□□ -0.25
LSP1-204ENST00000406638 KLHDC1Q8N7A1 406 aa13.49□□□□□ -0.25
LSP1-204ENST00000406638 KCNS1Q96KK3 526 aa13.49□□□□□ -0.25
LSP1-204ENST00000406638 LRP5LA4QPB2 252 aa13.48□□□□□ -0.25
LSP1-204ENST00000406638 RRHO14718 337 aa13.48□□□□□ -0.25
LSP1-204ENST00000406638 NIT1Q86X76 327 aa13.48□□□□□ -0.25
LSP1-204ENST00000406638 TMEM45BQ96B21 275 aa13.48□□□□□ -0.25
LSP1-204ENST00000406638 TRAV17A0A0B4J275 112 aa13.48□□□□□ -0.25
LSP1-204ENST00000406638 CEACAM4O75871 244 aa13.48□□□□□ -0.25
LSP1-204ENST00000406638 CEACAM21Q3KPI0 293 aa13.48□□□□□ -0.25
LSP1-204ENST00000406638 RIPPLY2Q5TAB7 128 aa13.48□□□□□ -0.25
LSP1-204ENST00000406638 FAM53AQ6NSI3 398 aaPredicted RBP13.48□□□□□ -0.25
LSP1-204ENST00000406638 SPSB4Q96A44 273 aa13.48□□□□□ -0.25
LSP1-204ENST00000406638 GSX1Q9H4S2 264 aaPredicted RBP13.48□□□□□ -0.25
LSP1-204ENST00000406638 YTHDF2Q9Y5A9 579 aaKnown RBP13.48□□□□□ -0.25
LSP1-204ENST00000406638 ZNF324O75467 553 aaPredicted RBP13.47□□□□□ -0.25
LSP1-204ENST00000406638 TNFSF4P23510 183 aa13.47□□□□□ -0.25
LSP1-204ENST00000406638 TCL1AP56279 114 aa13.47□□□□□ -0.25
LSP1-204ENST00000406638 LDLRAD2Q5SZI1 272 aa13.47□□□□□ -0.25
LSP1-204ENST00000406638 VHLLQ6RSH7 139 aa13.47□□□□□ -0.25
LSP1-204ENST00000406638 ZNF808Q8N4W9 903 aaPredicted RBP13.47□□□□□ -0.25
LSP1-204ENST00000406638 GMPPAQ96IJ6 420 aaPredicted RBP13.47□□□□□ -0.25
LSP1-204ENST00000406638 TRIB1Q96RU8 372 aa13.47□□□□□ -0.25
LSP1-204ENST00000406638 SFXN3Q9BWM7 321 aa13.47□□□□□ -0.25
LSP1-204ENST00000406638 C1QTNF5Q9BXJ0 243 aa13.47□□□□□ -0.25
LSP1-204ENST00000406638 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.47□□□□□ -0.25
LSP1-204ENST00000406638 TP73-AS1Q9UF72 201 aa13.47□□□□□ -0.25
LSP1-204ENST00000406638 TRAPPC2LQ9UL33 140 aa13.47□□□□□ -0.25
LSP1-204ENST00000406638 MMP23AO75900 390 aa13.47□□□□□ -0.25
LSP1-204ENST00000406638 CLDN14O95500 239 aa13.47□□□□□ -0.25
LSP1-204ENST00000406638 SRIP30626 198 aa13.47□□□□□ -0.25
LSP1-204ENST00000406638 MORN2Q502X0 79 aa13.47□□□□□ -0.25
LSP1-204ENST00000406638 MRPS16Q9Y3D3 137 aaKnown RBP13.47□□□□□ -0.25
LSP1-204ENST00000406638 A8MXE2 369 aa13.46□□□□□ -0.25
LSP1-204ENST00000406638 S1PR2O95136 353 aa13.46□□□□□ -0.25
LSP1-204ENST00000406638 CA2P00918 260 aa13.46□□□□□ -0.25
LSP1-204ENST00000406638 RPL30P62888 115 aaKnown RBP13.46□□□□□ -0.25
LSP1-204ENST00000406638 CLEC7AQ9BXN2 247 aa13.46□□□□□ -0.25
LSP1-204ENST00000406638 GNB1LQ9BYB4 327 aa13.46□□□□□ -0.25
LSP1-204ENST00000406638 LOC102724200A0A096LPH7 203 aaPredicted RBP13.46□□□□□ -0.25
LSP1-204ENST00000406638 CD1BP29016 333 aa13.46□□□□□ -0.25
LSP1-204ENST00000406638 MRGPRDQ8TDS7 321 aa13.46□□□□□ -0.25
LSP1-204ENST00000406638 BORCS7Q96B45 105 aa13.46□□□□□ -0.25
LSP1-204ENST00000406638 TRAV9-1A0A075B6T8 112 aa13.45□□□□□ -0.26
LSP1-204ENST00000406638 RHBDL1O75783 438 aa13.45□□□□□ -0.26
LSP1-204ENST00000406638 LINC00205P59089 165 aa13.45□□□□□ -0.26
LSP1-204ENST00000406638 VWC2Q2TAL6 325 aa13.45□□□□□ -0.26
LSP1-204ENST00000406638 MRPL21Q7Z2W9 205 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms