RNA–Protein interactions for RNA: ENST00000399408.6

ABCC1-201, Transcript of ATP binding cassette subfamily C member 1, humanhuman

TSL 5 BASIC

Gene ABCC1, Length 6,594 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-201ENST00000399408 GREB1Q4ZG55 1949 aa12.9□□□□□ -0.34
ABCC1-201ENST00000399408 CSRP1P21291 193 aaKnown RBP12.9□□□□□ -0.34
ABCC1-201ENST00000399408 FAM89BQ8N5H3 189 aa12.9□□□□□ -0.34
ABCC1-201ENST00000399408 EEF1AKMT3Q96AZ1 226 aa12.9□□□□□ -0.34
ABCC1-201ENST00000399408 DPM3Q9P2X0 92 aa12.9□□□□□ -0.34
ABCC1-201ENST00000399408 SCN2AQ99250 2005 aa12.9□□□□□ -0.34
ABCC1-201ENST00000399408 ZNF319Q9P2F9 582 aa12.9□□□□□ -0.35
ABCC1-201ENST00000399408 IL4P05112 153 aa12.89□□□□□ -0.35
ABCC1-201ENST00000399408 TRAV14DV4A0A0A6YYC5 116 aa12.89□□□□□ -0.35
ABCC1-201ENST00000399408 PINLYPA6NC86 204 aa12.89□□□□□ -0.35
ABCC1-201ENST00000399408 PSMB2P49721 201 aa12.89□□□□□ -0.35
ABCC1-201ENST00000399408 HIST1H2BAQ96A08 127 aa12.89□□□□□ -0.35
ABCC1-201ENST00000399408 CCL19Q99731 98 aa12.89□□□□□ -0.35
ABCC1-201ENST00000399408 LINC00312Q9Y6C7 94 aa12.89□□□□□ -0.35
ABCC1-201ENST00000399408 C17orf100A8MU93 164 aa12.89□□□□□ -0.35
ABCC1-201ENST00000399408 ALPK2Q86TB3 2170 aa12.89□□□□□ -0.35
ABCC1-201ENST00000399408 SYT8Q8NBV8 401 aa12.89□□□□□ -0.35
ABCC1-201ENST00000399408 NEU4Q8WWR8 484 aaPredicted RBP12.89□□□□□ -0.35
ABCC1-201ENST00000399408 SRSF12Q8WXF0 261 aaKnown RBP12.89□□□□□ -0.35
ABCC1-201ENST00000399408 CA7P43166 264 aa12.89□□□□□ -0.35
ABCC1-201ENST00000399408 RELQ04864 619 aaPredicted RBP12.89□□□□□ -0.35
ABCC1-201ENST00000399408 SFRP2Q96HF1 295 aa12.89□□□□□ -0.35
ABCC1-201ENST00000399408 ABCA7Q8IZY2 2146 aa12.89□□□□□ -0.35
ABCC1-201ENST00000399408 EFNA2O43921 213 aa12.89□□□□□ -0.35
ABCC1-201ENST00000399408 VENTXO95231 258 aa12.89□□□□□ -0.35
ABCC1-201ENST00000399408 LINC00305Q7Z4B0 112 aa12.89□□□□□ -0.35
ABCC1-201ENST00000399408 NPPCP23582 126 aa12.88□□□□□ -0.35
ABCC1-201ENST00000399408 GFI1Q99684 422 aa12.88□□□□□ -0.35
ABCC1-201ENST00000399408 ANOS1P23352 680 aa12.88□□□□□ -0.35
ABCC1-201ENST00000399408 RPLP1P05386 114 aaKnown RBP12.88□□□□□ -0.35
ABCC1-201ENST00000399408 LINC00271P0C7V0 271 aa12.88□□□□□ -0.35
ABCC1-201ENST00000399408 RTN4RL2Q86UN3 420 aa12.88□□□□□ -0.35
ABCC1-201ENST00000399408 GTF3AQ92664 365 aaKnown RBP12.88□□□□□ -0.35
ABCC1-201ENST00000399408 DOCK4Q8N1I0 1966 aa12.88□□□□□ -0.35
ABCC1-201ENST00000399408 CX3CL1P78423 397 aa12.88□□□□□ -0.35
ABCC1-201ENST00000399408 PAQR4Q8N4S7 273 aaPredicted RBP12.88□□□□□ -0.35
ABCC1-201ENST00000399408 SSBP3Q9BWW4 388 aaPredicted RBP12.88□□□□□ -0.35
ABCC1-201ENST00000399408 FBXL15Q9H469 300 aa12.88□□□□□ -0.35
ABCC1-201ENST00000399408 C5orf52A6NGY3 159 aa12.87□□□□□ -0.35
ABCC1-201ENST00000399408 TFF3Q07654 80 aa12.87□□□□□ -0.35
ABCC1-201ENST00000399408 GOLT1AQ6ZVE7 132 aa12.87□□□□□ -0.35
ABCC1-201ENST00000399408 ZIC4Q8N9L1 334 aa12.87□□□□□ -0.35
ABCC1-201ENST00000399408 SGK494Q96LW2 274 aa12.87□□□□□ -0.35
ABCC1-201ENST00000399408 CARHSP1Q9Y2V2 147 aaKnown RBP12.87□□□□□ -0.35
ABCC1-201ENST00000399408 CD59P13987 128 aa12.87□□□□□ -0.35
ABCC1-201ENST00000399408 CRYGSP22914 178 aa12.87□□□□□ -0.35
ABCC1-201ENST00000399408 CENPWQ5EE01 88 aa12.87□□□□□ -0.35
ABCC1-201ENST00000399408 C18orf12Q96KH6 178 aa12.87□□□□□ -0.35
ABCC1-201ENST00000399408 MRPL20Q9BYC9 149 aaKnown RBP12.87□□□□□ -0.35
ABCC1-201ENST00000399408 TRBV9A0A0B4J1U6 114 aa12.87□□□□□ -0.35
ABCC1-201ENST00000399408 EGR1P18146 543 aa12.87□□□□□ -0.35
ABCC1-201ENST00000399408 SRIP30626 198 aa12.87□□□□□ -0.35
ABCC1-201ENST00000399408 AREGP15514 252 aa12.86□□□□□ -0.35
ABCC1-201ENST00000399408 BTF3P20290 206 aaKnown RBP12.86□□□□□ -0.35
ABCC1-201ENST00000399408 IGKV1D-13A0A0B4J2D9 117 aa12.86□□□□□ -0.35
ABCC1-201ENST00000399408 IGKV1-13P0DP09 117 aa12.86□□□□□ -0.35
ABCC1-201ENST00000399408 IGFBP2P18065 325 aa12.86□□□□□ -0.35
ABCC1-201ENST00000399408 MPZP25189 248 aa12.86□□□□□ -0.35
ABCC1-201ENST00000399408 NMUP48645 174 aa12.86□□□□□ -0.35
ABCC1-201ENST00000399408 SMAGPQ0VAQ4 97 aa12.86□□□□□ -0.35
ABCC1-201ENST00000399408 IGHV3OR16-10A0A075B7F0 116 aa12.86□□□□□ -0.35
ABCC1-201ENST00000399408 LEPROTL1O95214 131 aa12.86□□□□□ -0.35
ABCC1-201ENST00000399408 AUP1Q9Y679 476 aa12.86□□□□□ -0.35
ABCC1-201ENST00000399408 IGKV3D-15A0A087WSY6 115 aa12.86□□□□□ -0.35
ABCC1-201ENST00000399408 SMUG1Q53HV7 270 aa12.86□□□□□ -0.35
ABCC1-201ENST00000399408 WDR82Q6UXN9 313 aa12.86□□□□□ -0.35
ABCC1-201ENST00000399408 OR4B1Q8NGF8 309 aa12.86□□□□□ -0.35
ABCC1-201ENST00000399408 SPRR3Q9UBC9 169 aa12.86□□□□□ -0.35
ABCC1-201ENST00000399408 OR4C46A6NHA9 309 aa12.85□□□□□ -0.35
ABCC1-201ENST00000399408 PMCHL1Q16048 86 aa12.85□□□□□ -0.35
ABCC1-201ENST00000399408 ZNF525Q8N782 197 aa12.85□□□□□ -0.35
ABCC1-201ENST00000399408 DOCK6Q96HP0 2047 aa12.85□□□□□ -0.35
ABCC1-201ENST00000399408 PHLDA3Q9Y5J5 127 aa12.85□□□□□ -0.35
ABCC1-201ENST00000399408 CACNA1EQ15878 2313 aa12.85□□□□□ -0.35
ABCC1-201ENST00000399408 CLPSP04118 112 aa12.85□□□□□ -0.35
ABCC1-201ENST00000399408 TRGC1P0CF51 173 aa12.85□□□□□ -0.35
ABCC1-201ENST00000399408 NAT1P18440 290 aa12.85□□□□□ -0.35
ABCC1-201ENST00000399408 RNFT1Q5M7Z0 435 aa12.85□□□□□ -0.35
ABCC1-201ENST00000399408 ATG101Q9BSB4 218 aa12.85□□□□□ -0.35
ABCC1-201ENST00000399408 GPR61Q9BZJ8 451 aa12.85□□□□□ -0.35
ABCC1-201ENST00000399408 CDX1P47902 265 aaPredicted RBP12.85□□□□□ -0.35
ABCC1-201ENST00000399408 LY6G6FQ5SQ64 297 aa12.85□□□□□ -0.35
ABCC1-201ENST00000399408 ZNF497Q6ZNH5 498 aa12.85□□□□□ -0.35
ABCC1-201ENST00000399408 MAP1LC3AQ9H492 121 aa12.85□□□□□ -0.35
ABCC1-201ENST00000399408 FGFBP3Q8TAT2 258 aa12.85□□□□□ -0.35
ABCC1-201ENST00000399408 TRAV24A0A0B4J272 114 aa12.85□□□□□ -0.35
ABCC1-201ENST00000399408 IGHV3-35A0A0C4DH35 117 aa12.85□□□□□ -0.35
ABCC1-201ENST00000399408 A8MXK9 166 aa12.85□□□□□ -0.35
ABCC1-201ENST00000399408 C2orf83Q53S99 150 aa12.85□□□□□ -0.35
ABCC1-201ENST00000399408 YPEL1O60688 119 aa12.84□□□□□ -0.35
ABCC1-201ENST00000399408 IGKV1D-33P01593 117 aa12.84□□□□□ -0.35
ABCC1-201ENST00000399408 IGKV1-33P01594 117 aa12.84□□□□□ -0.35
ABCC1-201ENST00000399408 YPEL2Q96QA6 119 aa12.84□□□□□ -0.35
ABCC1-201ENST00000399408 RNF126Q9BV68 326 aa12.84□□□□□ -0.35
ABCC1-201ENST00000399408 SEMA5BQ9P283 1151 aa12.84□□□□□ -0.35
ABCC1-201ENST00000399408 SRP19P09132 144 aaKnown RBP12.84□□□□□ -0.35
ABCC1-201ENST00000399408 GPX4P36969 197 aaPredicted RBP12.84□□□□□ -0.35
ABCC1-201ENST00000399408 LCN2P80188 198 aa12.84□□□□□ -0.35
ABCC1-201ENST00000399408 SAPCD1Q5SSQ6 148 aa12.84□□□□□ -0.35
ABCC1-201ENST00000399408 GGNQ86UU5 652 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms