RNA–Protein interactions for RNA: ENST00000377877.4

RNF38-205, Transcript of ring finger protein 38, humanhuman

TSL 2 BASIC

Gene RNF38, Length 1,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-205ENST00000377877 BSCL2Q96G97 398 aaPredicted RBP17.01■□□□□ 0.31
RNF38-205ENST00000377877 SPIN2AQ99865 258 aa17.01■□□□□ 0.31
RNF38-205ENST00000377877 SPIN2BQ9BPZ2 258 aa17.01■□□□□ 0.31
RNF38-205ENST00000377877 HIF1ANQ9NWT6 349 aa17.01■□□□□ 0.31
RNF38-205ENST00000377877 DPM3Q9P2X0 92 aa17.01■□□□□ 0.31
RNF38-205ENST00000377877 CACFD1Q9UGQ2 172 aa17.01■□□□□ 0.31
RNF38-205ENST00000377877 TEX15Q9BXT5 2789 aa17■□□□□ 0.31
RNF38-205ENST00000377877 C9JQL5 133 aa17■□□□□ 0.31
RNF38-205ENST00000377877 FOLR2P14207 255 aa17■□□□□ 0.31
RNF38-205ENST00000377877 KIR2DS2P43631 304 aa17■□□□□ 0.31
RNF38-205ENST00000377877 ZNF616Q08AN1 781 aa17■□□□□ 0.31
RNF38-205ENST00000377877 SSX9Q7RTT3 188 aa17■□□□□ 0.31
RNF38-205ENST00000377877 C15orf54Q8N8G6 183 aa17■□□□□ 0.31
RNF38-205ENST00000377877 AMMECR1Q9Y4X0 333 aaPredicted RBP17■□□□□ 0.31
RNF38-205ENST00000377877 HILPDAQ9Y5L2 63 aa17■□□□□ 0.31
RNF38-205ENST00000377877 IGHV1-3A0A0C4DH29 117 aa17■□□□□ 0.31
RNF38-205ENST00000377877 SRRM4A7MD48 611 aaKnown RBP17■□□□□ 0.31
RNF38-205ENST00000377877 CXorf66Q5JRM2 361 aaPredicted RBP17■□□□□ 0.31
RNF38-205ENST00000377877 TPTE2P1Q5T6R2 138 aa17■□□□□ 0.31
RNF38-205ENST00000377877 DYNAPQ8N1N2 210 aa17■□□□□ 0.31
RNF38-205ENST00000377877 LINC01356Q8N9X3 169 aa17■□□□□ 0.31
RNF38-205ENST00000377877 OR4S2Q8NH73 311 aa17■□□□□ 0.31
RNF38-205ENST00000377877 RPEQ96AT9 228 aa17■□□□□ 0.31
RNF38-205ENST00000377877 RITA1Q96K30 269 aa17■□□□□ 0.31
RNF38-205ENST00000377877 CACNG5Q9UF02 275 aa17■□□□□ 0.31
RNF38-205ENST00000377877 MMP24Q9Y5R2 645 aa17■□□□□ 0.31
RNF38-205ENST00000377877 AKAP9Q99996 3911 aa16.99■□□□□ 0.31
RNF38-205ENST00000377877 CENPVL3A0A0U1RRI6 287 aa16.99■□□□□ 0.31
RNF38-205ENST00000377877 MARCH11A6NNE9 402 aa16.99■□□□□ 0.31
RNF38-205ENST00000377877 NXPH3O95157 252 aa16.99■□□□□ 0.31
RNF38-205ENST00000377877 CRYBA1P05813 215 aa16.99■□□□□ 0.31
RNF38-205ENST00000377877 PPT1P50897 306 aa16.99■□□□□ 0.31
RNF38-205ENST00000377877 UBE2E1P51965 193 aa16.99■□□□□ 0.31
RNF38-205ENST00000377877 GUK1Q16774 197 aa16.99■□□□□ 0.31
RNF38-205ENST00000377877 PITX3O75364 302 aa16.98■□□□□ 0.31
RNF38-205ENST00000377877 AVPP01185 164 aa16.98■□□□□ 0.31
RNF38-205ENST00000377877 CLEC9AQ6UXN8 241 aa16.98■□□□□ 0.31
RNF38-205ENST00000377877 MOB3BQ86TA1 216 aa16.98■□□□□ 0.31
RNF38-205ENST00000377877 LFNGQ8NES3 379 aa16.98■□□□□ 0.31
RNF38-205ENST00000377877 AJUBAQ96IF1 538 aa16.98■□□□□ 0.31
RNF38-205ENST00000377877 PBDC1Q9BVG4 233 aa16.98■□□□□ 0.31
RNF38-205ENST00000377877 C7orf69Q9H7B7 122 aa16.98■□□□□ 0.31
RNF38-205ENST00000377877 CREBBPQ92793 2442 aa16.98■□□□□ 0.31
RNF38-205ENST00000377877 ABCA1O95477 2261 aa16.98■□□□□ 0.31
RNF38-205ENST00000377877 IGHV3OR16-10A0A075B7F0 116 aa16.98■□□□□ 0.31
RNF38-205ENST00000377877 A0A1B0GU03 582 aa16.98■□□□□ 0.31
RNF38-205ENST00000377877 PRH1P02810 166 aa16.98■□□□□ 0.31
RNF38-205ENST00000377877 AKR1D1P51857 326 aa16.98■□□□□ 0.31
RNF38-205ENST00000377877 RTL8BQ17RB0 113 aa16.98■□□□□ 0.31
RNF38-205ENST00000377877 TRAV3A0A0B4J244 114 aa16.97■□□□□ 0.31
RNF38-205ENST00000377877 A0A1W2PPI3 338 aa16.97■□□□□ 0.31
RNF38-205ENST00000377877 COLCA2A8K830 154 aa16.97■□□□□ 0.31
RNF38-205ENST00000377877 APOA2P02652 100 aa16.97■□□□□ 0.31
RNF38-205ENST00000377877 IFNA4P05014 189 aa16.97■□□□□ 0.31
RNF38-205ENST00000377877 OR9G9P0C7N8 305 aa16.97■□□□□ 0.31
RNF38-205ENST00000377877 IGHV4-31P0DP07 118 aa16.97■□□□□ 0.31
RNF38-205ENST00000377877 NQO2P16083 231 aa16.97■□□□□ 0.31
RNF38-205ENST00000377877 EWSR1Q01844 656 aaKnown RBP eCLIP16.97■□□□□ 0.31
RNF38-205ENST00000377877 SSX2Q16385 188 aa16.97■□□□□ 0.31
RNF38-205ENST00000377877 TMEM249Q2WGJ8 235 aa16.97■□□□□ 0.31
RNF38-205ENST00000377877 CIARTQ8N365 385 aaPredicted RBP16.97■□□□□ 0.31
RNF38-205ENST00000377877 PIP4P2Q8N4L2 257 aa16.97■□□□□ 0.31
RNF38-205ENST00000377877 CSPG4Q6UVK1 2322 aa16.97■□□□□ 0.31
RNF38-205ENST00000377877 TRAV20A0A0B4J274 112 aa16.97■□□□□ 0.31
RNF38-205ENST00000377877 PIGBOS1A0A0B4J2F0 54 aa16.97■□□□□ 0.31
RNF38-205ENST00000377877 TGFAP01135 160 aa16.97■□□□□ 0.31
RNF38-205ENST00000377877 RAB5BP61020 215 aa16.97■□□□□ 0.31
RNF38-205ENST00000377877 H2BFWTQ7Z2G1 175 aa16.97■□□□□ 0.31
RNF38-205ENST00000377877 RHOVQ96L33 236 aa16.97■□□□□ 0.31
RNF38-205ENST00000377877 C11orf1Q9H5F2 150 aa16.97■□□□□ 0.31
RNF38-205ENST00000377877 NOTCH2Q04721 2471 aa16.96■□□□□ 0.31
RNF38-205ENST00000377877 TNCP24821 2201 aa16.96■□□□□ 0.31
RNF38-205ENST00000377877 SLC25A6P12236 298 aa16.96■□□□□ 0.31
RNF38-205ENST00000377877 RPL35P42766 123 aaKnown RBP16.96■□□□□ 0.31
RNF38-205ENST00000377877 LGALS4P56470 323 aa16.96■□□□□ 0.31
RNF38-205ENST00000377877 ID3Q02535 119 aa16.96■□□□□ 0.31
RNF38-205ENST00000377877 ZNF266Q14584 549 aa16.96■□□□□ 0.31
RNF38-205ENST00000377877 OR2C3Q8N628 320 aa16.96■□□□□ 0.31
RNF38-205ENST00000377877 EIF5A2Q9GZV4 153 aaKnown RBP16.96■□□□□ 0.31
RNF38-205ENST00000377877 MAGT1Q9H0U3 335 aa16.96■□□□□ 0.31
RNF38-205ENST00000377877 WASHC3Q9Y3C0 194 aa16.96■□□□□ 0.31
RNF38-205ENST00000377877 A0A1B0GW64 132 aa16.95■□□□□ 0.3
RNF38-205ENST00000377877 NKX2-1P43699 371 aaPredicted RBP16.95■□□□□ 0.3
RNF38-205ENST00000377877 NHLH2Q02577 135 aa16.95■□□□□ 0.3
RNF38-205ENST00000377877 TMEM177Q53S58 311 aa16.95■□□□□ 0.3
RNF38-205ENST00000377877 HSD17B11Q8NBQ5 300 aa16.95■□□□□ 0.3
RNF38-205ENST00000377877 FLYWCH2Q96CP2 140 aaKnown RBP16.95■□□□□ 0.3
RNF38-205ENST00000377877 FOXC2Q99958 501 aa16.95■□□□□ 0.3
RNF38-205ENST00000377877 SCRT1Q9BWW7 348 aa16.95■□□□□ 0.3
RNF38-205ENST00000377877 SLC25A31Q9H0C2 315 aa16.95■□□□□ 0.3
RNF38-205ENST00000377877 SH3BGRL3Q9H299 93 aa16.95■□□□□ 0.3
RNF38-205ENST00000377877 ZNF98A6NK75 572 aa16.95■□□□□ 0.3
RNF38-205ENST00000377877 TIMM23O14925 209 aa16.95■□□□□ 0.3
RNF38-205ENST00000377877 MC5RP33032 325 aa16.95■□□□□ 0.3
RNF38-205ENST00000377877 CEACAM3P40198 252 aa16.95■□□□□ 0.3
RNF38-205ENST00000377877 POLR2GP62487 172 aaKnown RBP eCLIP16.95■□□□□ 0.3
RNF38-205ENST00000377877 RUSC1-AS1Q66K80 236 aa16.95■□□□□ 0.3
RNF38-205ENST00000377877 PDPNQ86YL7 162 aa16.95■□□□□ 0.3
RNF38-205ENST00000377877 RPS10P5Q9NQ39 176 aa16.95■□□□□ 0.3
RNF38-205ENST00000377877 TMEM140Q9NV12 185 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms