RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 ZNF114Q8NC26 417 aa12.2□□□□□ -0.46
PRKN-204ENST00000366896 NINJ1Q92982 152 aa12.2□□□□□ -0.46
PRKN-204ENST00000366896 SARAFQ96BY9 339 aa12.2□□□□□ -0.46
PRKN-204ENST00000366896 HSD17B10Q99714 261 aaKnown RBP12.2□□□□□ -0.46
PRKN-204ENST00000366896 DERL1Q9BUN8 251 aa12.2□□□□□ -0.46
PRKN-204ENST00000366896 KCNIP2Q9NS61 270 aa12.2□□□□□ -0.46
PRKN-204ENST00000366896 TLN1Q9Y490 2541 aaKnown RBP12.2□□□□□ -0.46
PRKN-204ENST00000366896 FAM90A9PA6NNJ1 464 aa12.2□□□□□ -0.46
PRKN-204ENST00000366896 C17orf112F2Z3M2 114 aa12.2□□□□□ -0.46
PRKN-204ENST00000366896 ZG16O60844 167 aa12.2□□□□□ -0.46
PRKN-204ENST00000366896 NDUFB4O95168 129 aa12.2□□□□□ -0.46
PRKN-204ENST00000366896 ATP5G3P48201 142 aa12.2□□□□□ -0.46
PRKN-204ENST00000366896 TRAT1Q6PIZ9 186 aa12.2□□□□□ -0.46
PRKN-204ENST00000366896 C11orf53Q8IXP5 236 aa12.2□□□□□ -0.46
PRKN-204ENST00000366896 RBFOX2O43251 390 aaKnown RBP eCLIP12.19□□□□□ -0.46
PRKN-204ENST00000366896 LY6DQ14210 128 aa12.19□□□□□ -0.46
PRKN-204ENST00000366896 KRTCAP3Q53RY4 240 aa12.19□□□□□ -0.46
PRKN-204ENST00000366896 PRR30Q53SZ7 412 aaPredicted RBP12.19□□□□□ -0.46
PRKN-204ENST00000366896 LRP11Q86VZ4 500 aa12.19□□□□□ -0.46
PRKN-204ENST00000366896 RAB1CQ92928 201 aa12.19□□□□□ -0.46
PRKN-204ENST00000366896 SNRNP40Q96DI7 357 aaKnown RBP12.19□□□□□ -0.46
PRKN-204ENST00000366896 COQ2Q96H96 371 aa12.19□□□□□ -0.46
PRKN-204ENST00000366896 CXXC4Q9H2H0 198 aa12.19□□□□□ -0.46
PRKN-204ENST00000366896 YLPM1P49750 1951 aaKnown RBP12.19□□□□□ -0.46
PRKN-204ENST00000366896 PGPEP1LA6NFU8 196 aa12.19□□□□□ -0.46
PRKN-204ENST00000366896 F6UZH7 168 aa12.19□□□□□ -0.46
PRKN-204ENST00000366896 ACP7Q6ZNF0 438 aa12.19□□□□□ -0.46
PRKN-204ENST00000366896 TPRX1Q8N7U7 411 aa12.19□□□□□ -0.46
PRKN-204ENST00000366896 KLF14Q8TD94 323 aaPredicted RBP12.19□□□□□ -0.46
PRKN-204ENST00000366896 MRGPRDQ8TDS7 321 aa12.19□□□□□ -0.46
PRKN-204ENST00000366896 CHODLQ9H9P2 273 aa12.19□□□□□ -0.46
PRKN-204ENST00000366896 OBP2BQ9NPH6 170 aa12.19□□□□□ -0.46
PRKN-204ENST00000366896 PRRC2CQ9Y520 2896 aaKnown RBP12.19□□□□□ -0.46
PRKN-204ENST00000366896 MDFIC2A0A1B0GVS7 189 aa12.18□□□□□ -0.46
PRKN-204ENST00000366896 CDKN1AP38936 164 aa12.18□□□□□ -0.46
PRKN-204ENST00000366896 HTD2P86397 168 aa12.18□□□□□ -0.46
PRKN-204ENST00000366896 GUSBP1Q15486 140 aa12.18□□□□□ -0.46
PRKN-204ENST00000366896 Q6ZT83 130 aa12.18□□□□□ -0.46
PRKN-204ENST00000366896 H2BFWTQ7Z2G1 175 aa12.18□□□□□ -0.46
PRKN-204ENST00000366896 Q8N7P7 452 aa12.18□□□□□ -0.46
PRKN-204ENST00000366896 HSPB9Q9BQS6 159 aa12.18□□□□□ -0.46
PRKN-204ENST00000366896 VAMP8Q9BV40 100 aa12.18□□□□□ -0.46
PRKN-204ENST00000366896 CLCF1Q9UBD9 225 aa12.18□□□□□ -0.46
PRKN-204ENST00000366896 METRNQ9UJH8 293 aa12.18□□□□□ -0.46
PRKN-204ENST00000366896 PAM16Q9Y3D7 125 aa12.18□□□□□ -0.46
PRKN-204ENST00000366896 TRBV20OR9-2A0A075B6H5 130 aa12.18□□□□□ -0.46
PRKN-204ENST00000366896 IGHV3-43A0A0B4J1X8 118 aa12.18□□□□□ -0.46
PRKN-204ENST00000366896 IGKV3-15P01624 115 aa12.18□□□□□ -0.46
PRKN-204ENST00000366896 IGHV3-43DP0DP04 118 aa12.18□□□□□ -0.46
PRKN-204ENST00000366896 SSTR5P35346 364 aa12.18□□□□□ -0.46
PRKN-204ENST00000366896 UBE2G2P60604 165 aa12.18□□□□□ -0.46
PRKN-204ENST00000366896 C21orf62-AS1Q17RA5 79 aa12.18□□□□□ -0.46
PRKN-204ENST00000366896 C1orf162Q8NEQ5 155 aaPredicted RBP12.18□□□□□ -0.46
PRKN-204ENST00000366896 OPN3Q9H1Y3 402 aaPredicted RBP12.18□□□□□ -0.46
PRKN-204ENST00000366896 SVILO95425 2214 aa12.18□□□□□ -0.46
PRKN-204ENST00000366896 USF3Q68DE3 2245 aa12.18□□□□□ -0.46
PRKN-204ENST00000366896 SERF1AO75920 110 aa12.17□□□□□ -0.46
PRKN-204ENST00000366896 ADH4P08319 380 aa12.17□□□□□ -0.46
PRKN-204ENST00000366896 KITLGP21583 273 aa12.17□□□□□ -0.46
PRKN-204ENST00000366896 GABRA2P47869 451 aa12.17□□□□□ -0.46
PRKN-204ENST00000366896 PRAMEF6Q5VXH4 476 aa12.17□□□□□ -0.46
PRKN-204ENST00000366896 PATZ1Q9HBE1 687 aaKnown RBP12.17□□□□□ -0.46
PRKN-204ENST00000366896 ITPR1Q14643 2758 aa12.17□□□□□ -0.46
PRKN-204ENST00000366896 AGFG2O95081 481 aa12.17□□□□□ -0.46
PRKN-204ENST00000366896 CRISP2P16562 243 aa12.17□□□□□ -0.46
PRKN-204ENST00000366896 BMP5P22003 454 aa12.17□□□□□ -0.46
PRKN-204ENST00000366896 PCP4P48539 62 aa12.17□□□□□ -0.46
PRKN-204ENST00000366896 COMPP49747 757 aaPredicted RBP12.17□□□□□ -0.46
PRKN-204ENST00000366896 DMRTA1Q5VZB9 504 aa12.17□□□□□ -0.46
PRKN-204ENST00000366896 VN1R17PQ8TDU5 208 aa12.17□□□□□ -0.46
PRKN-204ENST00000366896 TXNDC17Q9BRA2 123 aa12.17□□□□□ -0.46
PRKN-204ENST00000366896 FZR1Q9UM11 496 aa12.17□□□□□ -0.46
PRKN-204ENST00000366896 WDR83OSQ9Y284 106 aa12.17□□□□□ -0.46
PRKN-204ENST00000366896 USP24Q9UPU5 2620 aa12.17□□□□□ -0.46
PRKN-204ENST00000366896 TRAV9-1A0A075B6T8 112 aa12.16□□□□□ -0.46
PRKN-204ENST00000366896 LINC00473A8K010 186 aa12.16□□□□□ -0.46
PRKN-204ENST00000366896 DEFB108AA8MXU0 73 aa12.16□□□□□ -0.46
PRKN-204ENST00000366896 MPDU1O75352 247 aa12.16□□□□□ -0.46
PRKN-204ENST00000366896 TIMP3P35625 211 aa12.16□□□□□ -0.46
PRKN-204ENST00000366896 PDLIM3Q53GG5 364 aaPredicted RBP12.16□□□□□ -0.46
PRKN-204ENST00000366896 WDR82Q6UXN9 313 aa12.16□□□□□ -0.46
PRKN-204ENST00000366896 FAM214BQ7L5A3 538 aa12.16□□□□□ -0.46
PRKN-204ENST00000366896 C1orf174Q8IYL3 243 aa12.16□□□□□ -0.46
PRKN-204ENST00000366896 OR5AU1Q8NGC0 362 aa12.16□□□□□ -0.46
PRKN-204ENST00000366896 CBLN1P23435 193 aa12.16□□□□□ -0.46
PRKN-204ENST00000366896 OR5I1Q13606 314 aa12.16□□□□□ -0.46
PRKN-204ENST00000366896 COL5A1-AS1Q5SY13 56 aa12.16□□□□□ -0.46
PRKN-204ENST00000366896 OR13A1Q8NGR1 328 aa12.16□□□□□ -0.46
PRKN-204ENST00000366896 OR52E5Q8NH55 327 aa12.16□□□□□ -0.46
PRKN-204ENST00000366896 RFESDQ8TAC1 157 aa12.16□□□□□ -0.46
PRKN-204ENST00000366896 NBEAQ8NFP9 2946 aa12.16□□□□□ -0.46
PRKN-204ENST00000366896 ATRXP46100 2492 aa12.16□□□□□ -0.46
PRKN-204ENST00000366896 TRAV38-1A0A0B4J264 116 aa12.15□□□□□ -0.46
PRKN-204ENST00000366896 BATFQ16520 125 aa12.15□□□□□ -0.46
PRKN-204ENST00000366896 SMIM21Q3B7S5 101 aa12.15□□□□□ -0.46
PRKN-204ENST00000366896 OR10G8Q8NGN5 311 aa12.15□□□□□ -0.46
PRKN-204ENST00000366896 DCTN5Q9BTE1 182 aa12.15□□□□□ -0.46
PRKN-204ENST00000366896 MRPL18Q9H0U6 180 aaKnown RBP12.15□□□□□ -0.46
PRKN-204ENST00000366896 ZFP30Q9Y2G7 519 aa12.15□□□□□ -0.46
PRKN-204ENST00000366896 C15orf62A8K5M9 175 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 211.4 ms