RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 NCKAP5O14513 1909 aa13.5□□□□□ -0.25
UPK3B-202ENST00000334348 PSPNO60542 156 aa13.5□□□□□ -0.25
UPK3B-202ENST00000334348 HAND1O96004 215 aa13.5□□□□□ -0.25
UPK3B-202ENST00000334348 CDKN1BP46527 198 aa13.5□□□□□ -0.25
UPK3B-202ENST00000334348 MORN2Q502X0 79 aa13.5□□□□□ -0.25
UPK3B-202ENST00000334348 LYSMD4Q5XG99 296 aa13.5□□□□□ -0.25
UPK3B-202ENST00000334348 COX11Q9Y6N1 276 aa13.5□□□□□ -0.25
UPK3B-202ENST00000334348 TSPOP30536 169 aa13.49□□□□□ -0.25
UPK3B-202ENST00000334348 RHOBP62745 196 aa13.49□□□□□ -0.25
UPK3B-202ENST00000334348 EFNB3Q15768 340 aa13.49□□□□□ -0.25
UPK3B-202ENST00000334348 KIAA1644Q3SXP7 199 aa13.49□□□□□ -0.25
UPK3B-202ENST00000334348 SLC35E4Q6ICL7 350 aa13.49□□□□□ -0.25
UPK3B-202ENST00000334348 ZNF738Q8NE65 137 aa13.49□□□□□ -0.25
UPK3B-202ENST00000334348 BET1LQ9NYM9 111 aa13.49□□□□□ -0.25
UPK3B-202ENST00000334348 FREM2Q5SZK8 3169 aa13.49□□□□□ -0.25
UPK3B-202ENST00000334348 PINLYPA6NC86 204 aa13.49□□□□□ -0.25
UPK3B-202ENST00000334348 FAM90A9PA6NNJ1 464 aa13.49□□□□□ -0.25
UPK3B-202ENST00000334348 MT-CO3P00414 261 aa13.49□□□□□ -0.25
UPK3B-202ENST00000334348 LINC00205P59089 165 aa13.49□□□□□ -0.25
UPK3B-202ENST00000334348 SRYQ05066 204 aa13.49□□□□□ -0.25
UPK3B-202ENST00000334348 OR1C1Q15619 314 aa13.49□□□□□ -0.25
UPK3B-202ENST00000334348 SEPSECSQ9HD40 501 aaKnown RBP13.49□□□□□ -0.25
UPK3B-202ENST00000334348 TUBG2Q9NRH3 451 aa13.49□□□□□ -0.25
UPK3B-202ENST00000334348 OSTCQ9NRP0 149 aa13.49□□□□□ -0.25
UPK3B-202ENST00000334348 SLC35D1Q9NTN3 355 aa13.49□□□□□ -0.25
UPK3B-202ENST00000334348 LSM4Q9Y4Z0 139 aaKnown RBP13.49□□□□□ -0.25
UPK3B-202ENST00000334348 BMPR1BO00238 502 aa13.48□□□□□ -0.25
UPK3B-202ENST00000334348 VDAC2P45880 294 aaPredicted RBP13.48□□□□□ -0.25
UPK3B-202ENST00000334348 OR2D3Q8NGH3 330 aa13.48□□□□□ -0.25
UPK3B-202ENST00000334348 OR5B3Q8NH48 314 aa13.48□□□□□ -0.25
UPK3B-202ENST00000334348 WNT10AQ9GZT5 417 aa13.48□□□□□ -0.25
UPK3B-202ENST00000334348 ARRDC1-AS1Q9H2J1 176 aa13.48□□□□□ -0.25
UPK3B-202ENST00000334348 PILRBQ9UKJ0 227 aa13.48□□□□□ -0.25
UPK3B-202ENST00000334348 GTF3C1Q12789 2109 aa13.48□□□□□ -0.25
UPK3B-202ENST00000334348 CA2P00918 260 aa13.47□□□□□ -0.25
UPK3B-202ENST00000334348 HLA-DQA1P01909 254 aa13.47□□□□□ -0.25
UPK3B-202ENST00000334348 SRIP30626 198 aa13.47□□□□□ -0.25
UPK3B-202ENST00000334348 CEBPDP49716 269 aaPredicted RBP13.47□□□□□ -0.25
UPK3B-202ENST00000334348 GNG4P50150 75 aa13.47□□□□□ -0.25
UPK3B-202ENST00000334348 PMCHL1Q16048 86 aa13.47□□□□□ -0.25
UPK3B-202ENST00000334348 SPATA31B1PQ5VZV4 182 aa13.47□□□□□ -0.25
UPK3B-202ENST00000334348 OR52E5Q8NH55 327 aa13.47□□□□□ -0.25
UPK3B-202ENST00000334348 TSKUQ8WUA8 353 aa13.47□□□□□ -0.25
UPK3B-202ENST00000334348 SSMEM1Q8WWF3 244 aa13.47□□□□□ -0.25
UPK3B-202ENST00000334348 C1orf159Q96HA4 380 aa13.47□□□□□ -0.25
UPK3B-202ENST00000334348 GP6Q9HCN6 339 aa13.47□□□□□ -0.25
UPK3B-202ENST00000334348 NPVFQ9HCQ7 196 aa13.47□□□□□ -0.25
UPK3B-202ENST00000334348 HEYLQ9NQ87 328 aaPredicted RBP13.47□□□□□ -0.25
UPK3B-202ENST00000334348 ARL2-SNX15V9GYD0 113 aa13.47□□□□□ -0.25
UPK3B-202ENST00000334348 IGHV2-26A0A0B4J1V2 119 aa13.47□□□□□ -0.25
UPK3B-202ENST00000334348 TRAV34A0A0B4J273 112 aa13.47□□□□□ -0.25
UPK3B-202ENST00000334348 HELTA6NFD8 242 aa13.47□□□□□ -0.25
UPK3B-202ENST00000334348 SPINK4O60575 86 aa13.47□□□□□ -0.25
UPK3B-202ENST00000334348 FOXH1O75593 365 aa13.47□□□□□ -0.25
UPK3B-202ENST00000334348 AMY1AP04745 511 aa13.47□□□□□ -0.25
UPK3B-202ENST00000334348 FOLR3P41439 243 aa13.47□□□□□ -0.25
UPK3B-202ENST00000334348 HINT1P49773 126 aaPredicted RBP13.47□□□□□ -0.25
UPK3B-202ENST00000334348 CENPWQ5EE01 88 aa13.47□□□□□ -0.25
UPK3B-202ENST00000334348 UNQ5815/PRO19632Q6UWF5 114 aa13.47□□□□□ -0.25
UPK3B-202ENST00000334348 BORCS7Q96B45 105 aa13.47□□□□□ -0.25
UPK3B-202ENST00000334348 GFRA3O60609 400 aa13.46□□□□□ -0.25
UPK3B-202ENST00000334348 STUMQ69YW2 141 aa13.46□□□□□ -0.25
UPK3B-202ENST00000334348 CDC42EP3Q9UKI2 254 aa13.46□□□□□ -0.25
UPK3B-202ENST00000334348 CFIP05156 583 aa13.46□□□□□ -0.25
UPK3B-202ENST00000334348 AESQ08117 197 aa13.46□□□□□ -0.25
UPK3B-202ENST00000334348 Q0VFX4 171 aa13.46□□□□□ -0.25
UPK3B-202ENST00000334348 ZNF766Q5HY98 468 aa13.46□□□□□ -0.25
UPK3B-202ENST00000334348 LYG1Q8N1E2 194 aa13.46□□□□□ -0.25
UPK3B-202ENST00000334348 ZNF439Q8NDP4 499 aa13.46□□□□□ -0.25
UPK3B-202ENST00000334348 OR4A16Q8NH70 328 aa13.46□□□□□ -0.25
UPK3B-202ENST00000334348 HES4Q9HCC6 221 aa13.46□□□□□ -0.25
UPK3B-202ENST00000334348 IGHV2OR16-5A0A0B4J2B6 119 aa13.45□□□□□ -0.26
UPK3B-202ENST00000334348 FOXF2Q12947 444 aa13.45□□□□□ -0.26
UPK3B-202ENST00000334348 PRAMEF5Q5TYX0 476 aa13.45□□□□□ -0.26
UPK3B-202ENST00000334348 PRAMEF6Q5VXH4 476 aa13.45□□□□□ -0.26
UPK3B-202ENST00000334348 PQLC2Q6ZP29 291 aa13.45□□□□□ -0.26
UPK3B-202ENST00000334348 FAM19A2Q8N3H0 131 aa13.45□□□□□ -0.26
UPK3B-202ENST00000334348 PNKDQ8N490 385 aa13.45□□□□□ -0.26
UPK3B-202ENST00000334348 STPG3Q8N7X2 389 aa13.45□□□□□ -0.26
UPK3B-202ENST00000334348 OR4P4Q8NGL7 312 aa13.45□□□□□ -0.26
UPK3B-202ENST00000334348 MRGPRDQ8TDS7 321 aa13.45□□□□□ -0.26
UPK3B-202ENST00000334348 ALKBH7Q9BT30 221 aaPredicted RBP13.45□□□□□ -0.26
UPK3B-202ENST00000334348 RNASE7Q9H1E1 156 aaKnown RBP13.45□□□□□ -0.26
UPK3B-202ENST00000334348 MRPL27Q9P0M9 148 aaKnown RBP13.45□□□□□ -0.26
UPK3B-202ENST00000334348 LAMA5O15230 3695 aa13.45□□□□□ -0.26
UPK3B-202ENST00000334348 DIDO1Q9BTC0 2240 aaKnown RBP13.45□□□□□ -0.26
UPK3B-202ENST00000334348 LOC105371242A0A075B767 164 aa13.45□□□□□ -0.26
UPK3B-202ENST00000334348 ISLRO14498 428 aa13.45□□□□□ -0.26
UPK3B-202ENST00000334348 CGAP01215 116 aa13.45□□□□□ -0.26
UPK3B-202ENST00000334348 VASH2Q86V25 355 aa13.45□□□□□ -0.26
UPK3B-202ENST00000334348 DOLPP1Q86YN1 238 aa13.45□□□□□ -0.26
UPK3B-202ENST00000334348 GCNT2Q8N0V5 402 aa13.45□□□□□ -0.26
UPK3B-202ENST00000334348 COQ2Q96H96 371 aa13.45□□□□□ -0.26
UPK3B-202ENST00000334348 CLEC7AQ9BXN2 247 aa13.45□□□□□ -0.26
UPK3B-202ENST00000334348 PSG11Q9UQ72 335 aa13.45□□□□□ -0.26
UPK3B-202ENST00000334348 FAM186AA6NE01 2351 aa13.45□□□□□ -0.26
UPK3B-202ENST00000334348 USF3Q68DE3 2245 aa13.44□□□□□ -0.26
UPK3B-202ENST00000334348 SMIM27A0A1W2PRY6 76 aa13.44□□□□□ -0.26
UPK3B-202ENST00000334348 SELENOVP59797 346 aa13.44□□□□□ -0.26
UPK3B-202ENST00000334348 SLC35B1P78383 322 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms